RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 USP17L11C9JVI0 530 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 USP17L18D6R9N7 530 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 USP17L22D6RA61 530 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 USP17L17D6RBQ6 530 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 USP17L19D6RCP7 530 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 USP17L20D6RJB6 530 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 MYO1CO00159 1063 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 PMM2O15305 246 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 AKR1B10O60218 316 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 PSMD10O75832 226 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 UCHL3P15374 230 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 POLD1P28340 1107 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 SLC16A2P36021 539 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 IRAK1P51617 712 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 POLR2FP61218 127 aaKnown RBP4.24□□□□□ -1.73
RTN4-209ENST00000405240 JAG1P78504 1218 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 PTK2Q05397 1052 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 PPATQ06203 517 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 USP17L24Q0WX57 530 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 MYBPC2Q14324 1141 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 STRIP1Q5VSL9 837 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 USP17L6PQ6QN14 398 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 LRIG3Q6UXM1 1119 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 KDM7AQ6ZMT4 941 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 TMEM179Q6ZVK1 233 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 SLC9A9Q8IVB4 645 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 CASKIN2Q8WXE0 1202 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 HES6Q96HZ4 224 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 MKNK1Q9BUB5 465 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 PACSIN1Q9BY11 444 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 ISCUQ9H1K1 167 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 METTL14Q9HCE5 456 aaKnown RBP4.24□□□□□ -1.73
RTN4-209ENST00000405240 EHD2Q9NZN4 543 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 SUCLA2Q9P2R7 463 aaPredicted RBP4.24□□□□□ -1.73
RTN4-209ENST00000405240 PI4KBQ9UBF8 816 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 NAGPAQ9UK23 515 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 HDAC9Q9UKV0 1011 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 RRP15Q9Y3B9 282 aaKnown RBP4.24□□□□□ -1.73
RTN4-209ENST00000405240 PCDHA1Q9Y5I3 950 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 LCTP09848 1927 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 GOLGA6BA6NDN3 693 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 CALUO43852 315 aaPredicted RBP4.24□□□□□ -1.73
RTN4-209ENST00000405240 ENTPD3O75355 529 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 ZMYND10O75800 440 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 AKAP3O75969 853 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 TRIM37O94972 964 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 AFPP02771 609 aaKnown RBP4.24□□□□□ -1.73
RTN4-209ENST00000405240 HLA-DOAP06340 250 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 GAP43P17677 238 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 STAT3P40763 770 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 ATP2B2Q01814 1243 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 RRP1BQ14684 758 aaKnown RBP4.24□□□□□ -1.73
RTN4-209ENST00000405240 SHROOM1Q2M3G4 852 aaPredicted RBP4.24□□□□□ -1.73
RTN4-209ENST00000405240 HSP90B2PQ58FF3 399 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 SLFN13Q68D06 897 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 OTOP1Q7RTM1 612 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 IFT20Q8IY31 132 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 TPCN2Q8NHX9 752 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 LMO3Q8TAP4 145 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 WHAMMQ8TF30 809 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 C7orf43Q8WVR3 580 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 RIN2Q8WYP3 895 aaPredicted RBP4.24□□□□□ -1.73
RTN4-209ENST00000405240 TBC1D5Q92609 795 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 MS4A14Q96JA4 679 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 AMNQ9BXJ7 453 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 BMP2KQ9NSY1 1161 aaPredicted RBP4.24□□□□□ -1.73
RTN4-209ENST00000405240 KCND2Q9NZV8 630 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 GGA2Q9UJY4 613 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 POTEFA5A3E0 1075 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 CETN3O15182 167 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 EIF3HO15372 352 aaKnown RBP eCLIP4.23□□□□□ -1.73
RTN4-209ENST00000405240 OPA1O60313 960 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 KIF4AO95239 1232 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 FAM153BP0C7A2 387 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 POTEIP0CG38 1075 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 SLC9A1P19634 815 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 ALDH1B1P30837 517 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 PICALMQ13492 652 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 ASIC2Q16515 512 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 FAM153CQ494X1 144 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 FAM182BQ5T319 152 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 RINT1Q6NUQ1 792 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 POTEGQ6S5H5 508 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 POTEEQ6S8J3 1075 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 LEKR1Q6ZMV7 388 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 CCDC102AQ96A19 550 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 PCMTD1Q96MG8 357 aaPredicted RBP4.23□□□□□ -1.73
RTN4-209ENST00000405240 ZIM3Q96PE6 472 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 SMARCAL1Q9NZC9 954 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 PGAP2Q9UHJ9 254 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 FAM153AQ9UHL3 310 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 RPTORQ8N122 1335 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 BRCA1P38398 1863 aaKnown RBP4.23□□□□□ -1.73
RTN4-209ENST00000405240 EML1O00423 815 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 PES1O00541 588 aaKnown RBP4.23□□□□□ -1.73
RTN4-209ENST00000405240 DDX3XO00571 662 aaKnown RBP eCLIP4.23□□□□□ -1.73
RTN4-209ENST00000405240 DDX3YO15523 660 aaKnown RBP4.23□□□□□ -1.73
RTN4-209ENST00000405240 SLITRK3O94933 977 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 NR2F2P24468 414 aa4.23□□□□□ -1.73
RTN4-209ENST00000405240 CARSP49589 748 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms