RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 ABHD15Q6UXT9 468 aa17.46■□□□□ 0.39
TPM1-207ENST00000403994 SYMPKQ92797 1274 aaKnown RBP17.46■□□□□ 0.39
TPM1-207ENST00000403994 TOP1MTQ969P6 601 aa17.46■□□□□ 0.39
TPM1-207ENST00000403994 LENG9Q96B70 501 aa17.46■□□□□ 0.39
TPM1-207ENST00000403994 UIMC1Q96RL1 719 aa17.46■□□□□ 0.39
TPM1-207ENST00000403994 ZNF577Q9BSK1 485 aa17.46■□□□□ 0.39
TPM1-207ENST00000403994 PPP4R2Q9NY27 417 aa17.46■□□□□ 0.39
TPM1-207ENST00000403994 TTC3P53804 2025 aa17.46■□□□□ 0.39
TPM1-207ENST00000403994 KIAA1671Q9BY89 1806 aa17.46■□□□□ 0.39
TPM1-207ENST00000403994 EVPLQ92817 2033 aa17.45■□□□□ 0.38
TPM1-207ENST00000403994 CIITAP33076 1130 aa17.45■□□□□ 0.38
TPM1-207ENST00000403994 PRR16Q569H4 304 aa17.45■□□□□ 0.38
TPM1-207ENST00000403994 FAM160B1Q5W0V3 765 aa17.45■□□□□ 0.38
TPM1-207ENST00000403994 TSHZ1Q6ZSZ6 1077 aa17.45■□□□□ 0.38
TPM1-207ENST00000403994 TRIM22Q8IYM9 498 aa17.45■□□□□ 0.38
TPM1-207ENST00000403994 ATP8B4Q8TF62 1192 aa17.45■□□□□ 0.38
TPM1-207ENST00000403994 TNPO1Q92973 898 aaKnown RBP17.45■□□□□ 0.38
TPM1-207ENST00000403994 ASB2Q96Q27 587 aa17.45■□□□□ 0.38
TPM1-207ENST00000403994 YME1L1Q96TA2 773 aa17.45■□□□□ 0.38
TPM1-207ENST00000403994 LARP6Q9BRS8 491 aaKnown RBP17.45■□□□□ 0.38
TPM1-207ENST00000403994 C17orf80Q9BSJ5 609 aa17.45■□□□□ 0.38
TPM1-207ENST00000403994 SH3GLB2Q9NR46 395 aa17.45■□□□□ 0.38
TPM1-207ENST00000403994 UPP2O95045 317 aa17.44■□□□□ 0.38
TPM1-207ENST00000403994 MRPS5P82675 430 aaKnown RBP17.44■□□□□ 0.38
TPM1-207ENST00000403994 SKIV2LQ15477 1246 aaKnown RBP17.44■□□□□ 0.38
TPM1-207ENST00000403994 ZNF746Q6NUN9 644 aaPredicted RBP17.44■□□□□ 0.38
TPM1-207ENST00000403994 ZNF274Q96GC6 653 aaPredicted RBP17.44■□□□□ 0.38
TPM1-207ENST00000403994 TSPYL2Q9H2G4 693 aaPredicted RBP17.44■□□□□ 0.38
TPM1-207ENST00000403994 SUGCTQ9HAC7 445 aa17.44■□□□□ 0.38
TPM1-207ENST00000403994 ZNF302Q9NR11 478 aa17.44■□□□□ 0.38
TPM1-207ENST00000403994 TBC1D22BQ9NU19 505 aa17.44■□□□□ 0.38
TPM1-207ENST00000403994 PCDHA2Q9Y5H9 948 aa17.44■□□□□ 0.38
TPM1-207ENST00000403994 COL1A2P08123 1366 aa17.43■□□□□ 0.38
TPM1-207ENST00000403994 ZBTB42B2RXF5 422 aa17.43■□□□□ 0.38
TPM1-207ENST00000403994 CPLX1O14810 134 aa17.43■□□□□ 0.38
TPM1-207ENST00000403994 KRT76Q01546 638 aa17.43■□□□□ 0.38
TPM1-207ENST00000403994 TFF2Q03403 129 aa17.43■□□□□ 0.38
TPM1-207ENST00000403994 SSRP1Q08945 709 aaKnown RBP17.43■□□□□ 0.38
TPM1-207ENST00000403994 TMEM62Q0P6H9 643 aa17.43■□□□□ 0.38
TPM1-207ENST00000403994 STK3Q13188 491 aa17.43■□□□□ 0.38
TPM1-207ENST00000403994 MIS18BP1Q6P0N0 1132 aa17.43■□□□□ 0.38
TPM1-207ENST00000403994 PDXDC2PQ6P474 469 aa17.43■□□□□ 0.38
TPM1-207ENST00000403994 MTHFD1LQ6UB35 978 aa17.43■□□□□ 0.38
TPM1-207ENST00000403994 SMAP1Q8IYB5 467 aaPredicted RBP17.43■□□□□ 0.38
TPM1-207ENST00000403994 FBXO22Q8NEZ5 403 aa17.43■□□□□ 0.38
TPM1-207ENST00000403994 LINC01599Q8WXQ3 324 aa17.43■□□□□ 0.38
TPM1-207ENST00000403994 AGO3Q9H9G7 860 aaKnown RBP17.43■□□□□ 0.38
TPM1-207ENST00000403994 RC3H2Q9HBD1 1191 aaKnown RBP17.43■□□□□ 0.38
TPM1-207ENST00000403994 PDRG1Q9NUG6 133 aa17.43■□□□□ 0.38
TPM1-207ENST00000403994 TRPV2Q9Y5S1 764 aa17.43■□□□□ 0.38
TPM1-207ENST00000403994 IGSF9BQ9UPX0 1349 aa17.43■□□□□ 0.38
TPM1-207ENST00000403994 SMIM35A0A1B0GVV1 85 aa17.42■□□□□ 0.38
TPM1-207ENST00000403994 M0QZ92 97 aa17.42■□□□□ 0.38
TPM1-207ENST00000403994 EDIL3O43854 480 aa17.42■□□□□ 0.38
TPM1-207ENST00000403994 HBP1O60381 514 aa17.42■□□□□ 0.38
TPM1-207ENST00000403994 DEXIO95424 95 aa17.42■□□□□ 0.38
TPM1-207ENST00000403994 CD52P31358 61 aa17.42■□□□□ 0.38
TPM1-207ENST00000403994 NLRP5P59047 1200 aa17.42■□□□□ 0.38
TPM1-207ENST00000403994 NPY5RQ15761 445 aa17.42■□□□□ 0.38
TPM1-207ENST00000403994 IER5Q5VY09 327 aa17.42■□□□□ 0.38
TPM1-207ENST00000403994 SWSAP1Q6NVH7 229 aa17.42■□□□□ 0.38
TPM1-207ENST00000403994 AIFM3Q96NN9 605 aa17.42■□□□□ 0.38
TPM1-207ENST00000403994 LMCD1Q9NZU5 365 aa17.42■□□□□ 0.38
TPM1-207ENST00000403994 TCEAL9Q9UHQ7 104 aa17.42■□□□□ 0.38
TPM1-207ENST00000403994 TCF20Q9UGU0 1960 aaKnown RBP17.42■□□□□ 0.38
TPM1-207ENST00000403994 ADGRA3Q8IWK6 1321 aa17.42■□□□□ 0.38
TPM1-207ENST00000403994 KDM3AQ9Y4C1 1321 aa17.42■□□□□ 0.38
TPM1-207ENST00000403994 MSH4O15457 936 aa17.41■□□□□ 0.38
TPM1-207ENST00000403994 ATP4AP20648 1035 aa17.41■□□□□ 0.38
TPM1-207ENST00000403994 EPC2Q52LR7 807 aa17.41■□□□□ 0.38
TPM1-207ENST00000403994 ERICH6BQ5W0A0 696 aa17.41■□□□□ 0.38
TPM1-207ENST00000403994 DAGLBQ8NCG7 672 aa17.41■□□□□ 0.38
TPM1-207ENST00000403994 ADAMTS19Q8TE59 1207 aa17.41■□□□□ 0.38
TPM1-207ENST00000403994 PCDHA4Q9UN74 947 aa17.41■□□□□ 0.38
TPM1-207ENST00000403994 MAFBQ9Y5Q3 323 aaPredicted RBP17.41■□□□□ 0.38
TPM1-207ENST00000403994 SQORQ9Y6N5 450 aa17.41■□□□□ 0.38
TPM1-207ENST00000403994 M0R2N6 131 aa17.4■□□□□ 0.38
TPM1-207ENST00000403994 C22orf31O95567 290 aa17.4■□□□□ 0.38
TPM1-207ENST00000403994 PSAPP07602 524 aa17.4■□□□□ 0.38
TPM1-207ENST00000403994 KLRC1P26715 233 aa17.4■□□□□ 0.38
TPM1-207ENST00000403994 PAK2Q13177 524 aa17.4■□□□□ 0.38
TPM1-207ENST00000403994 CPLX2Q6PUV4 134 aaKnown RBP17.4■□□□□ 0.38
TPM1-207ENST00000403994 CKAP2LQ8IYA6 745 aa17.4■□□□□ 0.38
TPM1-207ENST00000403994 FAM177A1Q8N128 213 aaPredicted RBP17.4■□□□□ 0.38
TPM1-207ENST00000403994 TBCKQ8TEA7 893 aa17.4■□□□□ 0.38
TPM1-207ENST00000403994 SAMD11Q96NU1 681 aa17.4■□□□□ 0.38
TPM1-207ENST00000403994 CELF4Q9BZC1 486 aaKnown RBP17.4■□□□□ 0.38
TPM1-207ENST00000403994 PCDHA10Q9Y5I2 948 aa17.4■□□□□ 0.38
TPM1-207ENST00000403994 WDR64B1ANS9 1081 aa17.39■□□□□ 0.37
TPM1-207ENST00000403994 ENPP3O14638 875 aa17.39■□□□□ 0.37
TPM1-207ENST00000403994 LINC00271P0C7V0 271 aa17.39■□□□□ 0.37
TPM1-207ENST00000403994 USP11P51784 963 aa17.39■□□□□ 0.37
TPM1-207ENST00000403994 KCNQ1P51787 676 aa17.39■□□□□ 0.37
TPM1-207ENST00000403994 SCRN1Q12765 414 aa17.39■□□□□ 0.37
TPM1-207ENST00000403994 ZNF484Q5JVG2 852 aa17.39■□□□□ 0.37
TPM1-207ENST00000403994 BLIDQ8IZY5 108 aa17.39■□□□□ 0.37
TPM1-207ENST00000403994 NME8Q8N427 588 aa17.39■□□□□ 0.37
TPM1-207ENST00000403994 IL27Q8NEV9 243 aa17.39■□□□□ 0.37
TPM1-207ENST00000403994 BBXQ8WY36 941 aaPredicted RBP17.39■□□□□ 0.37
TPM1-207ENST00000403994 SLC5A5Q92911 643 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms