RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 TMEM265A0A087WTH1 108 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 RRN3P2A6NIE6 340 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 M0R2N6 131 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 SLC37A4O43826 429 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 MARCH6O60337 910 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 CCNT1O60563 726 aaKnown RBP9.51□□□□□ -0.89
USP16-202ENST00000399973 CAND2O75155 1236 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 CXCL10P02778 98 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 GHRP10912 638 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 FOSL2P15408 326 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 SLC26A2P50443 739 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 USP11P51784 963 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 DEFB103AP81534 67 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 MRPS6P82932 125 aaKnown RBP9.51□□□□□ -0.89
USP16-202ENST00000399973 NR5A1Q13285 461 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 IKBKEQ14164 716 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 GPNMBQ14956 572 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 TAF2Q6P1X5 1199 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 ABHD15Q6UXT9 468 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 PLPPR4Q7Z2D5 763 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 MIER3Q7Z3K6 550 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 HERC6Q8IVU3 1022 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 DBF4BQ8NFT6 615 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 DNAJB3Q8WWF6 145 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 SEPT8Q92599 483 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 SLC5A5Q92911 643 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 CDX2Q99626 313 aaPredicted RBP9.51□□□□□ -0.89
USP16-202ENST00000399973 ZBED2Q9BTP6 218 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 SEMA6BQ9H3T3 888 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 UNC45AQ9H3U1 944 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 ZNF576Q9H609 170 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 SLC28A3Q9HAS3 691 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 PCDHA10Q9Y5I2 948 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 CDY2AQ9Y6F7 541 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 KIAA1671Q9BY89 1806 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 IGSF9BQ9UPX0 1349 aa9.51□□□□□ -0.89
USP16-202ENST00000399973 COL1A2P08123 1366 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 M0QZ92 97 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 EDIL3O43854 480 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 TLL1O43897 1013 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 ST18O60284 1047 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 ATG7O95352 703 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 MMP1P03956 469 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 CA3P07451 260 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 RBM25P49756 843 aaKnown RBP9.5□□□□□ -0.89
USP16-202ENST00000399973 JAK3P52333 1124 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 ADAM17P78536 824 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 PRKCEQ02156 737 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 GNL2Q13823 731 aaKnown RBP9.5□□□□□ -0.89
USP16-202ENST00000399973 GRIN2CQ14957 1233 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 RABEP1Q15276 862 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 Q4G0T1 1027 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 MARCH8Q5T0T0 291 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 KRT40Q6A162 431 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 DIS3L2Q8IYB7 885 aaKnown RBP9.5□□□□□ -0.89
USP16-202ENST00000399973 MYOCDQ8IZQ8 938 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 FAM184AQ8NB25 1140 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 ATP8B4Q8TF62 1192 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 PPP1R16BQ96T49 567 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 RIT2Q99578 217 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 KIF2CQ99661 725 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 IFIH1Q9BYX4 1025 aaKnown RBP9.5□□□□□ -0.89
USP16-202ENST00000399973 PRDM12Q9H4Q4 367 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 DISC1Q9NRI5 854 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 SEPT9Q9UHD8 586 aaPredicted RBP9.5□□□□□ -0.89
USP16-202ENST00000399973 GINS2Q9Y248 185 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 STXBP5LQ9Y2K9 1186 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 PCDHA11Q9Y5I1 949 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 RALGAPA2Q2PPJ7 1873 aa9.5□□□□□ -0.89
USP16-202ENST00000399973 IGKV6D-21A0A0A0MT36 114 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 ABHD14A-ACY1A0A1B0GW23 586 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 MBLAC1A4D2B0 266 aaPredicted RBP9.49□□□□□ -0.89
USP16-202ENST00000399973 KIF28PB7ZC32 967 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 HBP1O60381 514 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 EFCAB14O75071 495 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 AMHP03971 560 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 OATP04181 439 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 GCFC2P16383 781 aaKnown RBP9.49□□□□□ -0.89
USP16-202ENST00000399973 IBSPP21815 317 aaPredicted RBP9.49□□□□□ -0.89
USP16-202ENST00000399973 SFNP31947 248 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 SAFBQ15424 915 aaKnown RBP eCLIP9.49□□□□□ -0.89
USP16-202ENST00000399973 UGCGQ16739 394 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 PLEKHG4Q58EX7 1191 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 EARS2Q5JPH6 523 aaKnown RBP9.49□□□□□ -0.89
USP16-202ENST00000399973 ZNF484Q5JVG2 852 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 MTHFD1LQ6UB35 978 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 MOXD1Q6UVY6 613 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.49□□□□□ -0.89
USP16-202ENST00000399973 METTL13Q8N6R0 699 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 ETNPPLQ8TBG4 499 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 C8orf76Q96K31 380 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 FAM167AQ96KS9 214 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 ZSCAN31Q96LW9 406 aaPredicted RBP9.49□□□□□ -0.89
USP16-202ENST00000399973 GAS2L1Q99501 681 aaPredicted RBP9.49□□□□□ -0.89
USP16-202ENST00000399973 NAP1L4Q99733 375 aaKnown RBP9.49□□□□□ -0.89
USP16-202ENST00000399973 OSBPL7Q9BZF2 842 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 CERS4Q9HA82 394 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 SH2B1Q9NRF2 756 aaPredicted RBP9.49□□□□□ -0.89
USP16-202ENST00000399973 TRPV2Q9Y5S1 764 aa9.49□□□□□ -0.89
USP16-202ENST00000399973 CYP3A7-CYP3A51PA0A087WV96 503 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms