RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 AP3B2Q13367 1082 aa12.68□□□□□ -0.38
SRMP1-201ENST00000398959 KRT32Q14532 448 aa12.68□□□□□ -0.38
SRMP1-201ENST00000398959 POTEBQ6S5H4 581 aa12.68□□□□□ -0.38
SRMP1-201ENST00000398959 PLPPR4Q7Z2D5 763 aa12.68□□□□□ -0.38
SRMP1-201ENST00000398959 CLP1Q92989 425 aaKnown RBP12.68□□□□□ -0.38
SRMP1-201ENST00000398959 ZNF689Q96CS4 500 aaPredicted RBP12.68□□□□□ -0.38
SRMP1-201ENST00000398959 LMAN2LQ9H0V9 348 aa12.68□□□□□ -0.38
SRMP1-201ENST00000398959 AGO3Q9H9G7 860 aaKnown RBP12.68□□□□□ -0.38
SRMP1-201ENST00000398959 RC3H2Q9HBD1 1191 aaKnown RBP12.68□□□□□ -0.38
SRMP1-201ENST00000398959 AGO4Q9HCK5 861 aaKnown RBP12.68□□□□□ -0.38
SRMP1-201ENST00000398959 TMEM260Q9NX78 707 aa12.68□□□□□ -0.38
SRMP1-201ENST00000398959 BARHL2Q9NY43 387 aa12.68□□□□□ -0.38
SRMP1-201ENST00000398959 PCDHA2Q9Y5H9 948 aa12.68□□□□□ -0.38
SRMP1-201ENST00000398959 IGSF9BQ9UPX0 1349 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 FAM86C2PA6NEL3 165 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 PI4K2BG5E9Z4 385 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 BACH1O14867 736 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 GRM6O15303 877 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 NCK2O43639 380 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 GPR37L1O60883 481 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 DGKIO75912 1065 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 SREBF1P36956 1147 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 SLC26A2P50443 739 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 FUT2Q10981 343 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 ITGB3BPQ13352 177 aaPredicted RBP12.67□□□□□ -0.38
SRMP1-201ENST00000398959 ADCK5Q3MIX3 580 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 FAM160B1Q5W0V3 765 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 MTHFD1LQ6UB35 978 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 SKAP1Q86WV1 359 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 LINC01599Q8WXQ3 324 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 PLVAPQ9BX97 442 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 CELF4Q9BZC1 486 aaKnown RBP12.67□□□□□ -0.38
SRMP1-201ENST00000398959 LRFN2Q9ULH4 789 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 PADI3Q9ULW8 664 aa12.67□□□□□ -0.38
SRMP1-201ENST00000398959 SMIM35A0A1B0GVV1 85 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 MEIS1O00470 390 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 CDC45O75419 566 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 ATG7O95352 703 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 HMGB1P09429 215 aaKnown RBP12.66□□□□□ -0.38
SRMP1-201ENST00000398959 LINC00271P0C7V0 271 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 STAG3L1P0CL83 205 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 SCG2P13521 617 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 IBSPP21815 317 aaPredicted RBP12.66□□□□□ -0.38
SRMP1-201ENST00000398959 CDC27P30260 824 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 CLK2P49760 499 aaKnown RBP12.66□□□□□ -0.38
SRMP1-201ENST00000398959 KRT76Q01546 638 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 TSGA10IPQ3SY00 556 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 PAN2Q504Q3 1202 aaKnown RBP12.66□□□□□ -0.38
SRMP1-201ENST00000398959 JAKMIP3Q5VZ66 844 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 CENPQQ7L2Z9 268 aaPredicted RBP12.66□□□□□ -0.38
SRMP1-201ENST00000398959 NIPA1Q7RTP0 329 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 PLA2G4DQ86XP0 818 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 NPAS4Q8IUM7 802 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 CMTR2Q8IYT2 770 aaKnown RBP12.66□□□□□ -0.38
SRMP1-201ENST00000398959 RASEFQ8IZ41 740 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 NME8Q8N427 588 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 ALG13Q9NP73 1137 aaKnown RBP12.66□□□□□ -0.38
SRMP1-201ENST00000398959 GINS2Q9Y248 185 aa12.66□□□□□ -0.38
SRMP1-201ENST00000398959 MRPL42Q9Y6G3 142 aaKnown RBP12.66□□□□□ -0.38
SRMP1-201ENST00000398959 KDM3AQ9Y4C1 1321 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 CCDC196A0A1B0GTZ2 297 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 HBP1O60381 514 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 MMP1P03956 469 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 ALADP13716 330 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 KLRC1P26715 233 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 METAP2P50579 478 aaKnown RBP eCLIP12.65□□□□□ -0.38
SRMP1-201ENST00000398959 RCAN1P53805 252 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 NFX1Q12986 1120 aaKnown RBP12.65□□□□□ -0.38
SRMP1-201ENST00000398959 COL19A1Q14993 1142 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 TMEM266Q2M3C6 531 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 PDXDC2PQ6P474 469 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 ABHD15Q6UXT9 468 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 RTN4RL1Q86UN2 441 aaPredicted RBP12.65□□□□□ -0.38
SRMP1-201ENST00000398959 CCDC12Q8WUD4 166 aaPredicted RBP12.65□□□□□ -0.38
SRMP1-201ENST00000398959 P2RX5Q93086 422 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 IGFLR1Q9H665 355 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 C11orf16Q9NQ32 467 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 ZNF302Q9NR11 478 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 FAM217BQ9NTX9 383 aaPredicted RBP12.65□□□□□ -0.38
SRMP1-201ENST00000398959 PRKAG3Q9UGI9 489 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 TCEAL9Q9UHQ7 104 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 COL1A2P08123 1366 aa12.65□□□□□ -0.38
SRMP1-201ENST00000398959 IGKV6D-21A0A0A0MT36 114 aa12.64□□□□□ -0.39
SRMP1-201ENST00000398959 FAM86B1E9PN63 330 aa12.64□□□□□ -0.39
SRMP1-201ENST00000398959 IPO5O00410 1097 aaKnown RBP12.64□□□□□ -0.39
SRMP1-201ENST00000398959 CCNE2O96020 404 aa12.64□□□□□ -0.39
SRMP1-201ENST00000398959 FAM86B2P0C5J1 330 aa12.64□□□□□ -0.39
SRMP1-201ENST00000398959 ADD1P35611 737 aaKnown RBP12.64□□□□□ -0.39
SRMP1-201ENST00000398959 LTBRP36941 435 aa12.64□□□□□ -0.39
SRMP1-201ENST00000398959 APOBRQ0VD83 1088 aa12.64□□□□□ -0.39
SRMP1-201ENST00000398959 HYAL1Q12794 435 aa12.64□□□□□ -0.39
SRMP1-201ENST00000398959 CLUL1Q15846 466 aa12.64□□□□□ -0.39
SRMP1-201ENST00000398959 PFKFB3Q16875 520 aaPredicted RBP12.64□□□□□ -0.39
SRMP1-201ENST00000398959 NAALADL2Q58DX5 795 aa12.64□□□□□ -0.39
SRMP1-201ENST00000398959 MIS18BP1Q6P0N0 1132 aa12.64□□□□□ -0.39
SRMP1-201ENST00000398959 Q6ZUG5 572 aa12.64□□□□□ -0.39
SRMP1-201ENST00000398959 CCDC60Q8IWA6 550 aaPredicted RBP12.64□□□□□ -0.39
SRMP1-201ENST00000398959 CKAP2LQ8IYA6 745 aa12.64□□□□□ -0.39
SRMP1-201ENST00000398959 CRIPAKQ8N1N5 446 aa12.64□□□□□ -0.39
SRMP1-201ENST00000398959 ATP8B4Q8TF62 1192 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms