RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 IMPACTQ9P2X3 320 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 MYO1AQ9UBC5 1043 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 TRPC5OSA6NMA1 111 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 SEC24DO94855 1032 aaPredicted RBP13.72□□□□□ -0.21
CCBE1-201ENST00000398179 UBTFL6P0CB48 400 aaPredicted RBP13.72□□□□□ -0.21
CCBE1-201ENST00000398179 ZSCAN22P10073 491 aaPredicted RBP13.72□□□□□ -0.21
CCBE1-201ENST00000398179 MYL6BP14649 208 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 RAB15P59190 212 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 OTUD4Q01804 1114 aaKnown RBP13.72□□□□□ -0.21
CCBE1-201ENST00000398179 PDCLQ13371 301 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 RGS9BPQ6ZS82 235 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 CCDC124Q96CT7 223 aaKnown RBP13.72□□□□□ -0.21
CCBE1-201ENST00000398179 TTC25Q96NG3 672 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 EDARQ9UNE0 448 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 RUSC2Q8N2Y8 1516 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 CYP11B2P19099 503 aa13.71□□□□□ -0.21
CCBE1-201ENST00000398179 STK4Q13043 487 aa13.71□□□□□ -0.21
CCBE1-201ENST00000398179 BRSK1Q8TDC3 778 aa13.71□□□□□ -0.21
CCBE1-201ENST00000398179 TRPC5Q9UL62 973 aaPredicted RBP13.71□□□□□ -0.21
CCBE1-201ENST00000398179 CALUO43852 315 aaPredicted RBP13.71□□□□□ -0.21
CCBE1-201ENST00000398179 NFKBIAP25963 317 aa13.71□□□□□ -0.21
CCBE1-201ENST00000398179 RGS7P49802 495 aa13.71□□□□□ -0.21
CCBE1-201ENST00000398179 PPIDQ08752 370 aaKnown RBP13.71□□□□□ -0.21
CCBE1-201ENST00000398179 MTX1Q13505 466 aa13.71□□□□□ -0.21
CCBE1-201ENST00000398179 RABL6Q3YEC7 729 aaPredicted RBP13.71□□□□□ -0.21
CCBE1-201ENST00000398179 RSBN1Q5VWQ0 802 aaPredicted RBP13.71□□□□□ -0.21
CCBE1-201ENST00000398179 HMBOX1Q6NT76 420 aa13.71□□□□□ -0.21
CCBE1-201ENST00000398179 TMEM87AQ8NBN3 555 aa13.71□□□□□ -0.21
CCBE1-201ENST00000398179 SMG7Q92540 1137 aaKnown RBP13.71□□□□□ -0.21
CCBE1-201ENST00000398179 CLP1Q92989 425 aaKnown RBP13.71□□□□□ -0.21
CCBE1-201ENST00000398179 C19orf60Q96EN9 201 aa13.71□□□□□ -0.21
CCBE1-201ENST00000398179 SPG7Q9UQ90 795 aa13.71□□□□□ -0.21
CCBE1-201ENST00000398179 HBS1LQ9Y450 684 aaKnown RBP13.71□□□□□ -0.21
CCBE1-201ENST00000398179 RRBP1Q9P2E9 1410 aaKnown RBP13.71□□□□□ -0.21
CCBE1-201ENST00000398179 RNASEH2AO75792 299 aaKnown RBP13.71□□□□□ -0.21
CCBE1-201ENST00000398179 RCVRNP35243 200 aa13.71□□□□□ -0.21
CCBE1-201ENST00000398179 RFKQ969G6 155 aa13.71□□□□□ -0.21
CCBE1-201ENST00000398179 ARHGEF37A1IGU5 675 aa13.71□□□□□ -0.22
CCBE1-201ENST00000398179 ADSLP30566 484 aaPredicted RBP13.71□□□□□ -0.22
CCBE1-201ENST00000398179 NUP107P57740 925 aa13.71□□□□□ -0.22
CCBE1-201ENST00000398179 SPARCL1Q14515 664 aa13.71□□□□□ -0.22
CCBE1-201ENST00000398179 DMC1Q14565 340 aa13.71□□□□□ -0.22
CCBE1-201ENST00000398179 RGS21Q2M5E4 152 aa13.71□□□□□ -0.22
CCBE1-201ENST00000398179 TEX13BQ9BXU2 312 aa13.71□□□□□ -0.22
CCBE1-201ENST00000398179 RNPEPQ9H4A4 650 aa13.71□□□□□ -0.22
CCBE1-201ENST00000398179 KRT86O43790 486 aa13.71□□□□□ -0.22
CCBE1-201ENST00000398179 KRT19P08727 400 aa13.71□□□□□ -0.22
CCBE1-201ENST00000398179 SLFN14P0C7P3 912 aa13.71□□□□□ -0.22
CCBE1-201ENST00000398179 BOLA3Q53S33 107 aa13.71□□□□□ -0.22
CCBE1-201ENST00000398179 BZW1Q7L1Q6 419 aaKnown RBP13.71□□□□□ -0.22
CCBE1-201ENST00000398179 UCMAQ8WVF2 138 aa13.71□□□□□ -0.22
CCBE1-201ENST00000398179 ZFPM2Q8WW38 1151 aa13.71□□□□□ -0.22
CCBE1-201ENST00000398179 APOL5Q9BWW9 433 aa13.71□□□□□ -0.22
CCBE1-201ENST00000398179 BOLA2Q9H3K6 86 aa13.71□□□□□ -0.22
CCBE1-201ENST00000398179 TDRD9Q8NDG6 1382 aaKnown RBP13.7□□□□□ -0.22
CCBE1-201ENST00000398179 SYTL2Q9HCH5 934 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 CUEDC1Q9NWM3 386 aaPredicted RBP13.7□□□□□ -0.22
CCBE1-201ENST00000398179 KRT87PA6NCN2 255 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 STARD3NLO95772 234 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 PYGBP11216 843 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 RARSP54136 660 aaKnown RBP13.7□□□□□ -0.22
CCBE1-201ENST00000398179 POTEAQ6S8J7 498 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 SCYL3Q8IZE3 742 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 TMX3Q96JJ7 454 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 UTP11Q9Y3A2 253 aaKnown RBP13.7□□□□□ -0.22
CCBE1-201ENST00000398179 MEFVO15553 781 aaPredicted RBP13.7□□□□□ -0.22
CCBE1-201ENST00000398179 GMFGO60234 142 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 KRT78Q8N1N4 520 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 APOL2Q9BQE5 337 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 POLG2Q9UHN1 485 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 UFL1O94874 794 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 ESRRAP11474 423 aaPredicted RBP13.7□□□□□ -0.22
CCBE1-201ENST00000398179 CAPRIN1Q14444 709 aaKnown RBP13.7□□□□□ -0.22
CCBE1-201ENST00000398179 EMC2Q15006 297 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 SULT6B1Q6IMI4 303 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 DLGAP2Q9P1A6 1054 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 RGS10O43665 173 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 AKR1B10O60218 316 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 IDH1O75874 414 aaKnown RBP13.7□□□□□ -0.22
CCBE1-201ENST00000398179 SMCO1Q147U7 214 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 ZC2HC1CQ53FD0 456 aaPredicted RBP13.7□□□□□ -0.22
CCBE1-201ENST00000398179 PYHIN1Q6K0P9 492 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 LRRC20Q8TCA0 184 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 TRIM56Q9BRZ2 755 aaKnown RBP13.7□□□□□ -0.22
CCBE1-201ENST00000398179 MLXQ9UH92 298 aa13.7□□□□□ -0.22
CCBE1-201ENST00000398179 ABLIM1O14639 778 aa13.69□□□□□ -0.22
CCBE1-201ENST00000398179 TCHHL1Q5QJ38 904 aaPredicted RBP13.69□□□□□ -0.22
CCBE1-201ENST00000398179 CATSPER3Q86XQ3 398 aa13.69□□□□□ -0.22
CCBE1-201ENST00000398179 RBM41Q96IZ5 413 aaKnown RBP13.69□□□□□ -0.22
CCBE1-201ENST00000398179 ZNF215Q9UL58 517 aaPredicted RBP13.69□□□□□ -0.22
CCBE1-201ENST00000398179 EIF3HO15372 352 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCBE1-201ENST00000398179 TOMM70O94826 608 aa13.69□□□□□ -0.22
CCBE1-201ENST00000398179 GJA1P17302 382 aa13.69□□□□□ -0.22
CCBE1-201ENST00000398179 SSRP1Q08945 709 aaKnown RBP13.69□□□□□ -0.22
CCBE1-201ENST00000398179 DHX34Q14147 1143 aaKnown RBP13.69□□□□□ -0.22
CCBE1-201ENST00000398179 R3HDM1Q15032 1099 aaKnown RBP13.69□□□□□ -0.22
CCBE1-201ENST00000398179 CYTH1Q15438 398 aa13.69□□□□□ -0.22
CCBE1-201ENST00000398179 ZNF569Q5MCW4 686 aa13.69□□□□□ -0.22
CCBE1-201ENST00000398179 ZNF425Q6IV72 752 aa13.69□□□□□ -0.22
CCBE1-201ENST00000398179 GLRX3O76003 335 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms