RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 METTL11BQ5VVY1 283 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 DHX40Q8IX18 779 aaKnown RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 CUL5Q93034 780 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 RBM41Q96IZ5 413 aaKnown RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 BPIFA3Q9BQP9 254 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 E7EWF7 191 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 RNF113AO15541 343 aaKnown RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 PDE6CP51160 858 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 TMEM62Q0P6H9 643 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 DPYSQ14117 519 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 PDIA6Q15084 440 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 CAVIN4Q5BKX8 364 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 LMBR1LQ6UX01 489 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 SPATA2LQ8IUW3 424 aaPredicted RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 CCDC148Q8NFR7 591 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 GOLPH3LQ9H4A5 285 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 KCND1Q9NSA2 647 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 ANGPTL3Q9Y5C1 460 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 PALLDQ8WX93 1383 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 ZNF646O15015 1829 aaPredicted RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 TEX28O15482 410 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 XPOTO43592 962 aaKnown RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 RASGRP1O95267 797 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 APBB3O95704 486 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 CYP17A1P05093 508 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 ZFYP08048 801 aaPredicted RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 PDIA3P30101 505 aaKnown RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 ADD1P35611 737 aaKnown RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 KCNJ6P48051 423 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 BLVRAP53004 296 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 C1QTNF8P60827 252 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 CCZ1BP86790 482 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 CCZ1P86791 482 aaPredicted RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 ZMYM1Q5SVZ6 1142 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 PHLDB3Q6NSJ2 640 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 OLFM4Q6UX06 510 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 ZNF354CQ86Y25 554 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 GRAMD2AQ8IUY3 354 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 ENGASEQ8NFI3 743 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 NRBF2Q96F24 287 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 COG8Q96MW5 612 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 PARD6BQ9BYG5 372 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 CYLDQ9NQC7 956 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 ORC3Q9UBD5 711 aaPredicted RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 HOOK1Q9UJC3 728 aaKnown RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 PCDHA7Q9UN72 937 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 EPN1Q9Y6I3 576 aaPredicted RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 COL15A1P39059 1388 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 CARMIL3Q8ND23 1372 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 C10orf71Q711Q0 1435 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 A0A1B0GVL5 298 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 IL33O95760 270 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 TROVE2P10155 538 aaKnown RBP eCLIP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 SCNN1DP51172 638 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 EXOSC10Q01780 885 aaKnown RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 COL9A3Q14050 684 aaPredicted RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 PPP1R7Q15435 360 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 VWA3BQ502W6 1294 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 LDLRAD1Q5T700 205 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 CRTC1Q6UUV9 634 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 ATP6V0A1Q93050 837 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 PSKH2Q96QS6 385 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 OSBPL9Q96SU4 736 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 AGXT2Q9BYV1 514 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 FAM107BQ9H098 131 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 ATP6V0A4Q9HBG4 840 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 NCOA5Q9HCD5 579 aaKnown RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 POLR3EQ9NVU0 708 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 IFNKQ9P0W0 207 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 CACNA1SQ13698 1873 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 KRBA1A5PL33 1030 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 KATNA1O75449 491 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 FESP07332 822 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 HSPD1P10809 573 aaKnown RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 IDO1P14902 403 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 STAT3P40763 770 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 RFX5P48382 616 aaPredicted RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 LIMK1P53667 647 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 ELF2Q15723 593 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 RCSD1Q6JBY9 416 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 LVRNQ6Q4G3 990 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 METTL3Q86U44 580 aaKnown RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 FMR1NBQ8N0W7 255 aaPredicted RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 PLBD2Q8NHP8 589 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 SCG3Q8WXD2 468 aaKnown RBP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 CDKL2Q92772 493 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 FTOQ9C0B1 505 aaKnown RBP eCLIP7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 NDUFB9Q9Y6M9 179 aa7.17□□□□□ -1.26
TM9SF4-202ENST00000398022 GOLGA8BA8MQT2 603 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 ATP5J2-PTCD1G3V325 749 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 PTCD1O75127 700 aaKnown RBP7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 GBP2P32456 591 aaPredicted RBP7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 GCLCP48506 637 aaPredicted RBP7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 CORO7P57737 925 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 CDK17Q00537 523 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 ARID5BQ14865 1188 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 CWF19L1Q69YN2 538 aaKnown RBP7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 CORO6Q6QEF8 472 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 STOX1Q6ZVD7 989 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms