RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 NPNTQ6UXI9 565 aa7.68□□□□□ -1.18
SMCO1-201ENST00000397537 MFSD6Q6ZSS7 791 aa7.68□□□□□ -1.18
SMCO1-201ENST00000397537 DDX53Q86TM3 631 aaKnown RBP7.68□□□□□ -1.18
SMCO1-201ENST00000397537 SULF2Q8IWU5 870 aa7.68□□□□□ -1.18
SMCO1-201ENST00000397537 ZNF527Q8NB42 609 aa7.68□□□□□ -1.18
SMCO1-201ENST00000397537 CCDC191Q8NCU4 936 aa7.68□□□□□ -1.18
SMCO1-201ENST00000397537 STON2Q8WXE9 905 aa7.68□□□□□ -1.18
SMCO1-201ENST00000397537 DPF3Q92784 378 aa7.68□□□□□ -1.18
SMCO1-201ENST00000397537 AIDAQ96BJ3 306 aa7.68□□□□□ -1.18
SMCO1-201ENST00000397537 HAUS7Q99871 368 aa7.68□□□□□ -1.18
SMCO1-201ENST00000397537 LRFN3Q9BTN0 628 aa7.68□□□□□ -1.18
SMCO1-201ENST00000397537 SORBS1Q9BX66 1292 aaKnown RBP7.68□□□□□ -1.18
SMCO1-201ENST00000397537 BHLHE41Q9C0J9 482 aaPredicted RBP7.68□□□□□ -1.18
SMCO1-201ENST00000397537 MAGEH1Q9H213 219 aa7.68□□□□□ -1.18
SMCO1-201ENST00000397537 DHX36Q9H2U1 1008 aaKnown RBP7.68□□□□□ -1.18
SMCO1-201ENST00000397537 H2AFY2Q9P0M6 372 aaPredicted RBP7.68□□□□□ -1.18
SMCO1-201ENST00000397537 HERC5Q9UII4 1024 aaKnown RBP7.68□□□□□ -1.18
SMCO1-201ENST00000397537 CORO2BQ9UQ03 480 aa7.68□□□□□ -1.18
SMCO1-201ENST00000397537 DNMT1P26358 1616 aaKnown RBP7.67□□□□□ -1.18
SMCO1-201ENST00000397537 A0A087X0M5 115 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 A0A1B0GX30 115 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 A0A1W2PPH5 198 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 H7C0S8 307 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 GFRA2O00451 464 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 DOK2O60496 412 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 UBXN7O94888 489 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 TP53P04637 393 aaPredicted RBP7.67□□□□□ -1.18
SMCO1-201ENST00000397537 TECP42680 631 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 MBTPS1Q14703 1052 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 SF1Q15637 639 aaKnown RBP7.67□□□□□ -1.18
SMCO1-201ENST00000397537 ASIC2Q16515 512 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 HSF5Q4G112 596 aaPredicted RBP7.67□□□□□ -1.18
SMCO1-201ENST00000397537 BROXQ5VW32 411 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 PGBD2Q6P3X8 592 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 ADAMTSL4Q6UY14 1074 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 FAM47EQ6ZV65 393 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 IQCA1Q86XH1 822 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 DENND1CQ8IV53 801 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 TMEM41AQ96HV5 264 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 FGD4Q96M96 766 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 KIAA1683Q9H0B3 1180 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 CBX8Q9HC52 389 aa7.67□□□□□ -1.18
SMCO1-201ENST00000397537 CFDP1Q9UEE9 299 aaPredicted RBP7.67□□□□□ -1.18
SMCO1-201ENST00000397537 MAGED2Q9UNF1 606 aaPredicted RBP7.67□□□□□ -1.18
SMCO1-201ENST00000397537 FCF1Q9Y324 198 aaKnown RBP7.67□□□□□ -1.18
SMCO1-201ENST00000397537 RRP15Q9Y3B9 282 aaKnown RBP7.67□□□□□ -1.18
SMCO1-201ENST00000397537 PGPEP1LA6NFU8 196 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 RHPN2P1A8MT19 583 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 HSPA4LO95757 839 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 KPNA1P52294 538 aaPredicted RBP7.66□□□□□ -1.18
SMCO1-201ENST00000397537 PPP2R3AQ06190 1150 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 TYRO3Q06418 890 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 TRIM29Q14134 588 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 ARMC4Q5T2S8 1044 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 TDRD10Q5VZ19 366 aaKnown RBP7.66□□□□□ -1.18
SMCO1-201ENST00000397537 MAMDC2Q7Z304 686 aaPredicted RBP7.66□□□□□ -1.18
SMCO1-201ENST00000397537 LRRTM4Q86VH4 590 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 TRMT2AQ8IZ69 625 aaKnown RBP7.66□□□□□ -1.18
SMCO1-201ENST00000397537 MIER2Q8N344 545 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 IGSF22Q8N9C0 903 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 JAKMIP2Q96AA8 810 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 SLX1AQ9BQ83 275 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 CCDC68Q9H2F9 335 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 IRAK4Q9NWZ3 460 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 ZDHHC3Q9NYG2 299 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 SERPINB13Q9UIV8 391 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 ITGB1BP2Q9UKP3 347 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 ZKSCAN5Q9Y2L8 839 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 SOS1Q07889 1333 aaPredicted RBP7.66□□□□□ -1.18
SMCO1-201ENST00000397537 A2ML1A8K2U0 1454 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 SYNMO15061 1565 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 KDM5CP41229 1560 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 F5H0A9 414 aaPredicted RBP7.66□□□□□ -1.18
SMCO1-201ENST00000397537 MAN1A2O60476 641 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 USO1O60763 962 aaKnown RBP7.66□□□□□ -1.18
SMCO1-201ENST00000397537 MMP20O60882 483 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 MAFO75444 373 aaPredicted RBP7.66□□□□□ -1.18
SMCO1-201ENST00000397537 SASH3O75995 380 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 KRT1P04264 644 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 ADH1AP07327 375 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 NAP1L1P55209 391 aaKnown RBP7.66□□□□□ -1.18
SMCO1-201ENST00000397537 CDC16Q13042 620 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 CNN3Q15417 329 aaKnown RBP7.66□□□□□ -1.18
SMCO1-201ENST00000397537 ISM2Q6H9L7 571 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 GALNT17Q6IS24 598 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 CCDC73Q6ZRK6 1079 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 AFAP1Q8N556 730 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 LMBR1Q8WVP7 490 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 PHKBQ93100 1093 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 CFAP53Q96M91 514 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 TMEM51Q9NW97 253 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 SLC13A4Q9UKG4 626 aa7.66□□□□□ -1.18
SMCO1-201ENST00000397537 GPC6Q9Y625 555 aaPredicted RBP7.66□□□□□ -1.18
SMCO1-201ENST00000397537 ZNF518AQ6AHZ1 1483 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 PLCH2O75038 1416 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 C17orf113A0A1B0GUU1 675 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 NFKBIEO00221 500 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 MEN1O00255 615 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 SLC4A1P02730 911 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 TNNT3P45378 269 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 251 ms