RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 UNC13DQ70J99 1090 aa30.63■■■□□ 2.49
CPNE1-203ENST00000397442 SEPT1Q8WYJ6 367 aa30.63■■■□□ 2.49
CPNE1-203ENST00000397442 GPR20Q99678 358 aa30.63■■■□□ 2.49
CPNE1-203ENST00000397442 ZHX1Q9UKY1 873 aaPredicted RBP30.63■■■□□ 2.49
CPNE1-203ENST00000397442 MAFBQ9Y5Q3 323 aaPredicted RBP30.63■■■□□ 2.49
CPNE1-203ENST00000397442 MYH9P35579 1960 aaKnown RBP30.63■■■□□ 2.49
CPNE1-203ENST00000397442 CYP2C19P33261 490 aa30.62■■■□□ 2.49
CPNE1-203ENST00000397442 PRAMEF19Q5SWL8 479 aa30.62■■■□□ 2.49
CPNE1-203ENST00000397442 FLT3LGP49771 235 aa30.62■■■□□ 2.49
CPNE1-203ENST00000397442 EHHADHQ08426 723 aa30.62■■■□□ 2.49
CPNE1-203ENST00000397442 ZNF658Q5TYW1 1059 aaPredicted RBP30.62■■■□□ 2.49
CPNE1-203ENST00000397442 C1orf186Q6ZWK4 172 aa30.62■■■□□ 2.49
CPNE1-203ENST00000397442 SMYD4Q8IYR2 804 aaPredicted RBP30.62■■■□□ 2.49
CPNE1-203ENST00000397442 MLKLQ8NB16 471 aa30.62■■■□□ 2.49
CPNE1-203ENST00000397442 SPATA33Q96N06 139 aa30.62■■■□□ 2.49
CPNE1-203ENST00000397442 BMP2KQ9NSY1 1161 aaPredicted RBP30.62■■■□□ 2.49
CPNE1-203ENST00000397442 TMEM150BA6NC51 233 aa30.61■■■□□ 2.49
CPNE1-203ENST00000397442 BACH1O14867 736 aa30.61■■■□□ 2.49
CPNE1-203ENST00000397442 ZNF865P0CJ78 1059 aaPredicted RBP30.61■■■□□ 2.49
CPNE1-203ENST00000397442 SMPD1P17405 629 aa30.61■■■□□ 2.49
CPNE1-203ENST00000397442 TCF7P36402 384 aaPredicted RBP30.61■■■□□ 2.49
CPNE1-203ENST00000397442 RARRES1P49788 294 aa30.61■■■□□ 2.49
CPNE1-203ENST00000397442 GIT2Q14161 759 aa30.61■■■□□ 2.49
CPNE1-203ENST00000397442 IQCB1Q15051 598 aa30.61■■■□□ 2.49
CPNE1-203ENST00000397442 CCDC144BQ3MJ40 725 aa30.61■■■□□ 2.49
CPNE1-203ENST00000397442 ANO5Q75V66 913 aa30.61■■■□□ 2.49
CPNE1-203ENST00000397442 ZNF302Q9NR11 478 aa30.61■■■□□ 2.49
CPNE1-203ENST00000397442 ADCY6O43306 1168 aa30.6■■■□□ 2.49
CPNE1-203ENST00000397442 CD44P16070 742 aaKnown RBP30.6■■■□□ 2.49
CPNE1-203ENST00000397442 ATP4AP20648 1035 aa30.6■■■□□ 2.49
CPNE1-203ENST00000397442 PRKCZQ05513 592 aa30.6■■■□□ 2.49
CPNE1-203ENST00000397442 RAD51AP2Q09MP3 1159 aa30.6■■■□□ 2.49
CPNE1-203ENST00000397442 KIF22Q14807 665 aa30.6■■■□□ 2.49
CPNE1-203ENST00000397442 DUSP28Q4G0W2 176 aa30.6■■■□□ 2.49
CPNE1-203ENST00000397442 IQSEC1Q6DN90 963 aa30.6■■■□□ 2.49
CPNE1-203ENST00000397442 EMID1Q96A84 441 aaPredicted RBP30.6■■■□□ 2.49
CPNE1-203ENST00000397442 BPIFA3Q9BQP9 254 aa30.6■■■□□ 2.49
CPNE1-203ENST00000397442 ANKEF1Q9NU02 776 aa30.6■■■□□ 2.49
CPNE1-203ENST00000397442 FRMD3A2A2Y4 597 aa30.59■■■□□ 2.49
CPNE1-203ENST00000397442 GPR25O00155 361 aa30.59■■■□□ 2.49
CPNE1-203ENST00000397442 DKC1O60832 514 aaKnown RBP eCLIP30.59■■■□□ 2.49
CPNE1-203ENST00000397442 GH1P01241 217 aa30.59■■■□□ 2.49
CPNE1-203ENST00000397442 CACNB1Q02641 598 aaPredicted RBP30.59■■■□□ 2.49
CPNE1-203ENST00000397442 UTP14CQ5TAP6 766 aaKnown RBP30.59■■■□□ 2.49
CPNE1-203ENST00000397442 LUZP1Q86V48 1076 aa30.59■■■□□ 2.49
CPNE1-203ENST00000397442 REEP2Q9BRK0 252 aa30.59■■■□□ 2.49
CPNE1-203ENST00000397442 NAT10Q9H0A0 1025 aaKnown RBP30.59■■■□□ 2.49
CPNE1-203ENST00000397442 EXOC1Q9NV70 894 aa30.59■■■□□ 2.49
CPNE1-203ENST00000397442 GDAQ9Y2T3 454 aa30.59■■■□□ 2.49
CPNE1-203ENST00000397442 CASP8AP2Q9UKL3 1982 aa30.59■■■□□ 2.49
CPNE1-203ENST00000397442 PPP1R3GB7ZBB8 358 aa30.58■■■□□ 2.49
CPNE1-203ENST00000397442 IDEP14735 1019 aa30.58■■■□□ 2.49
CPNE1-203ENST00000397442 MRE11P49959 708 aa30.58■■■□□ 2.49
CPNE1-203ENST00000397442 PRKCEQ02156 737 aa30.58■■■□□ 2.49
CPNE1-203ENST00000397442 LAMC2Q13753 1193 aa30.58■■■□□ 2.49
CPNE1-203ENST00000397442 AFAP1L1Q8TED9 768 aa30.58■■■□□ 2.49
CPNE1-203ENST00000397442 ARHGEF35A5YM69 484 aa30.58■■■□□ 2.49
CPNE1-203ENST00000397442 NOP56O00567 594 aaKnown RBP30.58■■■□□ 2.49
CPNE1-203ENST00000397442 LGR5O75473 907 aa30.58■■■□□ 2.49
CPNE1-203ENST00000397442 DHX40Q8IX18 779 aaKnown RBP30.58■■■□□ 2.49
CPNE1-203ENST00000397442 CD99L2Q8TCZ2 262 aa30.58■■■□□ 2.49
CPNE1-203ENST00000397442 PANK4Q9NVE7 773 aa30.58■■■□□ 2.49
CPNE1-203ENST00000397442 SAGE1Q9NXZ1 904 aa30.58■■■□□ 2.49
CPNE1-203ENST00000397442 KCND2Q9NZV8 630 aa30.58■■■□□ 2.49
CPNE1-203ENST00000397442 KRT18P05783 430 aaKnown RBP30.57■■■□□ 2.48
CPNE1-203ENST00000397442 COASYQ13057 564 aa30.57■■■□□ 2.48
CPNE1-203ENST00000397442 PLA2G4FQ68DD2 849 aa30.57■■■□□ 2.48
CPNE1-203ENST00000397442 PADI6Q6TGC4 694 aa30.57■■■□□ 2.48
CPNE1-203ENST00000397442 TRMT1LQ7Z2T5 733 aaKnown RBP30.57■■■□□ 2.48
CPNE1-203ENST00000397442 TRIB2Q92519 343 aa30.57■■■□□ 2.48
CPNE1-203ENST00000397442 HPS3Q969F9 1004 aa30.57■■■□□ 2.48
CPNE1-203ENST00000397442 CCDC47Q96A33 483 aaKnown RBP30.57■■■□□ 2.48
CPNE1-203ENST00000397442 SH2D3AQ9BRG2 576 aa30.57■■■□□ 2.48
CPNE1-203ENST00000397442 ARID2Q68CP9 1835 aa30.57■■■□□ 2.48
CPNE1-203ENST00000397442 NPEPPSP55786 919 aa30.56■■■□□ 2.48
CPNE1-203ENST00000397442 STK4Q13043 487 aa30.56■■■□□ 2.48
CPNE1-203ENST00000397442 NKRFO15226 690 aaKnown RBP eCLIP30.55■■■□□ 2.48
CPNE1-203ENST00000397442 HSPA6P17066 643 aa30.55■■■□□ 2.48
CPNE1-203ENST00000397442 STAT5BP51692 787 aa30.55■■■□□ 2.48
CPNE1-203ENST00000397442 XKR3Q5GH77 459 aa30.55■■■□□ 2.48
CPNE1-203ENST00000397442 RSPH10B2B2RC85 870 aa30.55■■■□□ 2.48
CPNE1-203ENST00000397442 RSPH10BP0C881 870 aa30.55■■■□□ 2.48
CPNE1-203ENST00000397442 GUCY2CP25092 1073 aa30.55■■■□□ 2.48
CPNE1-203ENST00000397442 TNFAIP2Q03169 654 aa30.55■■■□□ 2.48
CPNE1-203ENST00000397442 XKR9Q5GH70 373 aa30.55■■■□□ 2.48
CPNE1-203ENST00000397442 FAM160B1Q5W0V3 765 aa30.55■■■□□ 2.48
CPNE1-203ENST00000397442 CCDC65Q8IXS2 484 aa30.55■■■□□ 2.48
CPNE1-203ENST00000397442 KIAA0895Q8NCT3 520 aa30.55■■■□□ 2.48
CPNE1-203ENST00000397442 PPTC7Q8NI37 304 aa30.55■■■□□ 2.48
CPNE1-203ENST00000397442 MED15Q96RN5 788 aa30.55■■■□□ 2.48
CPNE1-203ENST00000397442 DACH1Q9UI36 760 aa30.55■■■□□ 2.48
CPNE1-203ENST00000397442 GNEQ9Y223 722 aaKnown RBP30.55■■■□□ 2.48
CPNE1-203ENST00000397442 EMSYQ7Z589 1322 aa30.54■■■□□ 2.48
CPNE1-203ENST00000397442 PRCPP42785 496 aa30.54■■■□□ 2.48
CPNE1-203ENST00000397442 OTUD6AQ7L8S5 288 aa30.54■■■□□ 2.48
CPNE1-203ENST00000397442 AOPEPQ8N6M6 819 aa30.54■■■□□ 2.48
CPNE1-203ENST00000397442 AFG1LQ8WV93 481 aa30.54■■■□□ 2.48
CPNE1-203ENST00000397442 POLD4Q9HCU8 107 aa30.54■■■□□ 2.48
CPNE1-203ENST00000397442 PCDHA2Q9Y5H9 948 aa30.54■■■□□ 2.48
CPNE1-203ENST00000397442 OATP04181 439 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms