RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 MTRQ99707 1265 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 DISC1Q9NRI5 854 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 SAMM50Q9Y512 469 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 STK24Q9Y6E0 443 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 EML1O00423 815 aa16.61■□□□□ 0.25
CAPN3-207ENST00000397200 CCNE2O96020 404 aa16.61■□□□□ 0.25
CAPN3-207ENST00000397200 CDC25AP30304 524 aa16.61■□□□□ 0.25
CAPN3-207ENST00000397200 CCZ1BP86790 482 aa16.61■□□□□ 0.25
CAPN3-207ENST00000397200 CCZ1P86791 482 aaPredicted RBP16.61■□□□□ 0.25
CAPN3-207ENST00000397200 ARHGAP1Q07960 439 aa16.61■□□□□ 0.25
CAPN3-207ENST00000397200 LAMC2Q13753 1193 aa16.61■□□□□ 0.25
CAPN3-207ENST00000397200 MAP3K21Q5TCX8 1036 aa16.61■□□□□ 0.25
CAPN3-207ENST00000397200 HAUS3Q68CZ6 603 aa16.61■□□□□ 0.25
CAPN3-207ENST00000397200 C17orf53Q8N3J3 647 aaPredicted RBP16.61■□□□□ 0.25
CAPN3-207ENST00000397200 SPATA33Q96N06 139 aa16.61■□□□□ 0.25
CAPN3-207ENST00000397200 NOP56O00567 594 aaKnown RBP16.6■□□□□ 0.25
CAPN3-207ENST00000397200 SEPT4O43236 478 aa16.6■□□□□ 0.25
CAPN3-207ENST00000397200 ADCY6O43306 1168 aa16.6■□□□□ 0.25
CAPN3-207ENST00000397200 AFMP43652 599 aa16.6■□□□□ 0.25
CAPN3-207ENST00000397200 ACTR2P61160 394 aa16.6■□□□□ 0.25
CAPN3-207ENST00000397200 EPHA7Q15375 998 aa16.6■□□□□ 0.25
CAPN3-207ENST00000397200 NAALADL2Q58DX5 795 aa16.6■□□□□ 0.25
CAPN3-207ENST00000397200 CABP7Q86V35 215 aa16.6■□□□□ 0.25
CAPN3-207ENST00000397200 RDM1Q8NG50 284 aa16.6■□□□□ 0.25
CAPN3-207ENST00000397200 OR6J1Q8NGC5 347 aa16.6■□□□□ 0.25
CAPN3-207ENST00000397200 RASSF8Q8NHQ8 419 aa16.6■□□□□ 0.25
CAPN3-207ENST00000397200 SNX29Q8TEQ0 813 aa16.6■□□□□ 0.25
CAPN3-207ENST00000397200 EMID1Q96A84 441 aaPredicted RBP16.6■□□□□ 0.25
CAPN3-207ENST00000397200 MAGEF1Q9HAY2 307 aa16.6■□□□□ 0.25
CAPN3-207ENST00000397200 FANCLQ9NW38 375 aa16.6■□□□□ 0.25
CAPN3-207ENST00000397200 GNEQ9Y223 722 aaKnown RBP16.6■□□□□ 0.25
CAPN3-207ENST00000397200 MYL1P05976 194 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 CCND3P30281 292 aaPredicted RBP16.59■□□□□ 0.25
CAPN3-207ENST00000397200 CCT6AP40227 531 aaKnown RBP16.59■□□□□ 0.25
CAPN3-207ENST00000397200 SLC9C1Q4G0N8 1177 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 MIS18BP1Q6P0N0 1132 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 TLK2Q86UE8 772 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 CCDC150Q8NCX0 1101 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 SH3TC2Q8TF17 1288 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 EIF2AK1Q9BQI3 630 aaKnown RBP16.59■□□□□ 0.25
CAPN3-207ENST00000397200 CUEDC2Q9H467 287 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 KCND1Q9NSA2 647 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 PCDHA10Q9Y5I2 948 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 WDR81Q562E7 1941 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 PPP1R3GB7ZBB8 358 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 PSAPP07602 524 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 PKN2Q16513 984 aaKnown RBP16.59■□□□□ 0.25
CAPN3-207ENST00000397200 HSDL1Q3SXM5 330 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 NEK9Q8TD19 979 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 SEPT1Q8WYJ6 367 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 LENG1Q96BZ8 264 aaPredicted RBP16.59■□□□□ 0.25
CAPN3-207ENST00000397200 CALML4Q96GE6 196 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 CDK5RAP3Q96JB5 506 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 NAP1L5Q96NT1 182 aaPredicted RBP16.59■□□□□ 0.25
CAPN3-207ENST00000397200 MMTAG2Q9BU76 263 aaKnown RBP16.59■□□□□ 0.25
CAPN3-207ENST00000397200 AP5M1Q9H0R1 490 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 Q9Y3F1 56 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 NFE2L3Q9Y4A8 694 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 TELO2Q9Y4R8 837 aa16.59■□□□□ 0.25
CAPN3-207ENST00000397200 SYNRGQ9UMZ2 1314 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 KDM3AQ9Y4C1 1321 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 DYNC1LI2O43237 492 aaPredicted RBP16.58■□□□□ 0.24
CAPN3-207ENST00000397200 SLC26A4O43511 780 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 DUSP11O75319 330 aaKnown RBP16.58■□□□□ 0.24
CAPN3-207ENST00000397200 SUPT20HL2P0C7V6 817 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 RARBP10826 455 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 CD44P16070 742 aaKnown RBP16.58■□□□□ 0.24
CAPN3-207ENST00000397200 CASP1P29466 404 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 STAT6P42226 847 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 KCNJ6P48051 423 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 UBASH3AP57075 661 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 ARID5BQ14865 1188 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 KARSQ15046 597 aaKnown RBP16.58■□□□□ 0.24
CAPN3-207ENST00000397200 FBXO46Q6PJ61 603 aaPredicted RBP16.58■□□□□ 0.24
CAPN3-207ENST00000397200 ABHD15Q6UXT9 468 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 FILIP1Q7Z7B0 1213 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 PPTC7Q8NI37 304 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 GPR20Q99678 358 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 POLR3CQ9BUI4 534 aaPredicted RBP16.58■□□□□ 0.24
CAPN3-207ENST00000397200 HMX1Q9NP08 348 aaPredicted RBP16.58■□□□□ 0.24
CAPN3-207ENST00000397200 INTS13Q9NVM9 706 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 KBTBD4Q9NVX7 518 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 RMND1Q9NWS8 449 aa16.58■□□□□ 0.24
CAPN3-207ENST00000397200 MYH9P35579 1960 aaKnown RBP16.57■□□□□ 0.24
CAPN3-207ENST00000397200 GSTTP1A0A1W2PQM5 241 aa16.57■□□□□ 0.24
CAPN3-207ENST00000397200 ATG7O95352 703 aa16.57■□□□□ 0.24
CAPN3-207ENST00000397200 P4HBP07237 508 aaKnown RBP16.57■□□□□ 0.24
CAPN3-207ENST00000397200 RPA1P27694 616 aa16.57■□□□□ 0.24
CAPN3-207ENST00000397200 CYP4A11Q02928 519 aa16.57■□□□□ 0.24
CAPN3-207ENST00000397200 KCNB1Q14721 858 aa16.57■□□□□ 0.24
CAPN3-207ENST00000397200 SPATA1Q5VX52 437 aa16.57■□□□□ 0.24
CAPN3-207ENST00000397200 TMC6Q7Z403 805 aa16.57■□□□□ 0.24
CAPN3-207ENST00000397200 VSTM4Q8IW00 320 aa16.57■□□□□ 0.24
CAPN3-207ENST00000397200 BANK1Q8NDB2 785 aa16.57■□□□□ 0.24
CAPN3-207ENST00000397200 AFG1LQ8WV93 481 aa16.57■□□□□ 0.24
CAPN3-207ENST00000397200 DYDC2Q96IM9 177 aa16.57■□□□□ 0.24
CAPN3-207ENST00000397200 HSD17B14Q9BPX1 270 aa16.57■□□□□ 0.24
CAPN3-207ENST00000397200 TUFT1Q9NNX1 390 aa16.57■□□□□ 0.24
CAPN3-207ENST00000397200 RGL1Q9NZL6 768 aa16.57■□□□□ 0.24
CAPN3-207ENST00000397200 BACH1O14867 736 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms