RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 PCDHGB4Q9UN71 923 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 AURKCQ9UQB9 309 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 ARHGAP10A1A4S6 786 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 MRPS25P82663 173 aaKnown RBP13.22□□□□□ -0.29
SMU1-201ENST00000397149 COBLL1Q53SF7 1204 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 MFSD4BQ5TF39 518 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 NBPF15Q8N660 670 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 ZNF577Q9BSK1 485 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 FAM167BQ9BTA0 163 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 DYRK4Q9NR20 520 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 SATB2Q9UPW6 733 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 TCP1P17987 556 aaKnown RBP13.22□□□□□ -0.29
SMU1-201ENST00000397149 CIITAP33076 1130 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 DHX9Q08211 1270 aaKnown RBP13.22□□□□□ -0.29
SMU1-201ENST00000397149 ACAD11Q709F0 780 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMU1-201ENST00000397149 ATXN7L3BQ96GX2 97 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 BCL2L12Q9HB09 334 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 PCDHA5Q9Y5H7 936 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 HEY1Q9Y5J3 304 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 MYO1EQ12965 1108 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 BLIDQ8IZY5 108 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 SLC7A3Q8WY07 619 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 FHDC1Q9C0D6 1143 aaPredicted RBP13.22□□□□□ -0.29
SMU1-201ENST00000397149 ATP6V0A4Q9HBG4 840 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 AIPL1Q9NZN9 384 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 TNNQ9UQP3 1299 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 MED7O43513 233 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 MYO1DO94832 1006 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 TNFAIP1Q13829 316 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 CYTH1Q15438 398 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 FAM98CQ17RN3 349 aaKnown RBP13.21□□□□□ -0.29
SMU1-201ENST00000397149 SLC44A4Q53GD3 710 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 ARPP21Q9UBL0 812 aaPredicted RBP13.21□□□□□ -0.29
SMU1-201ENST00000397149 TSC22D2O75157 780 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 PPP3CCP48454 512 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 PRKCQQ04759 706 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 CLIC6Q96NY7 704 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 NDEL1Q9GZM8 345 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 PLCH2O75038 1416 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 MYO1GB0I1T2 1018 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 PDE8AO60658 829 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 SCG2P13521 617 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 CEP85Q6P2H3 762 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 MRPL50Q8N5N7 158 aaKnown RBP13.21□□□□□ -0.29
SMU1-201ENST00000397149 CCDC141Q6ZP82 1450 aa13.21□□□□□ -0.29
SMU1-201ENST00000397149 GOLGA8IPA6NC78 632 aa13.21□□□□□ -0.3
SMU1-201ENST00000397149 GOLGA8JA6NMD2 632 aa13.21□□□□□ -0.3
SMU1-201ENST00000397149 DDHD2O94830 711 aa13.21□□□□□ -0.3
SMU1-201ENST00000397149 BPIFB4P59827 614 aa13.21□□□□□ -0.3
SMU1-201ENST00000397149 RERGLQ9H628 205 aa13.21□□□□□ -0.3
SMU1-201ENST00000397149 MLXIPLQ9NP71 852 aa13.21□□□□□ -0.3
SMU1-201ENST00000397149 PRG3Q9Y2Y8 225 aaPredicted RBP13.21□□□□□ -0.3
SMU1-201ENST00000397149 PCDHA1Q9Y5I3 950 aa13.21□□□□□ -0.3
SMU1-201ENST00000397149 HFM1A2PYH4 1435 aa13.21□□□□□ -0.3
SMU1-201ENST00000397149 USP17L12C9JPN9 530 aa13.21□□□□□ -0.3
SMU1-201ENST00000397149 USP17L21D6R901 530 aa13.21□□□□□ -0.3
SMU1-201ENST00000397149 SPDYAQ5MJ70 313 aa13.21□□□□□ -0.3
SMU1-201ENST00000397149 ELAC2Q9BQ52 826 aaKnown RBP13.21□□□□□ -0.3
SMU1-201ENST00000397149 PARVBQ9HBI1 364 aa13.21□□□□□ -0.3
SMU1-201ENST00000397149 OSBPP22059 807 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 DCAF15Q66K64 600 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 YAF2Q8IY57 180 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 CEP170P1Q96L14 293 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 APOBEC2Q9Y235 224 aaKnown RBP13.2□□□□□ -0.3
SMU1-201ENST00000397149 LINC00854A0A1B0GVQ3 168 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 MAPK13O15264 365 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 NUGGCQ68CJ6 796 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 MIS18BP1Q6P0N0 1132 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 CNOT6LQ96LI5 555 aaKnown RBP13.2□□□□□ -0.3
SMU1-201ENST00000397149 LBHD1Q9BQE6 289 aaPredicted RBP13.2□□□□□ -0.3
SMU1-201ENST00000397149 SPON2Q9BUD6 331 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 H2AFY2Q9P0M6 372 aaPredicted RBP13.2□□□□□ -0.3
SMU1-201ENST00000397149 FARP1Q9Y4F1 1045 aaPredicted RBP13.2□□□□□ -0.3
SMU1-201ENST00000397149 RFX3P48380 749 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 ICA1Q05084 483 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 OR52Z1P0C646 297 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 MLH1P40692 756 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 MDM2Q00987 491 aaPredicted RBP13.2□□□□□ -0.3
SMU1-201ENST00000397149 CUL1Q13616 776 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 MMS22LQ6ZRQ5 1243 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 FAM47EQ6ZV65 393 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 NUP93Q8N1F7 819 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 C10orf53Q8N6V4 93 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 FAM133AQ8N9E0 248 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 RRP15Q9Y3B9 282 aaKnown RBP13.2□□□□□ -0.3
SMU1-201ENST00000397149 CUX1P39880 1505 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 C9orf84Q5VXU9 1444 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 FOSP01100 380 aaPredicted RBP13.2□□□□□ -0.3
SMU1-201ENST00000397149 MED21Q13503 144 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 ARHGAP17Q68EM7 881 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 KCTD1Q719H9 257 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 CCHCR1Q8TD31 782 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 SH3TC1Q8TE82 1336 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 ATXN3P54252 364 aaPredicted RBP13.2□□□□□ -0.3
SMU1-201ENST00000397149 PPARAQ07869 468 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 PLD3Q8IV08 490 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 EXOSC4Q9NPD3 245 aaKnown RBP13.2□□□□□ -0.3
SMU1-201ENST00000397149 IL16Q14005 1332 aa13.2□□□□□ -0.3
SMU1-201ENST00000397149 EYA2O00167 538 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms