RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 hCG_1642624A0A1W2PR95 340 aa18.58■□□□□ 0.56
CLTA-203ENST00000396603 MMP1P03956 469 aa18.58■□□□□ 0.56
CLTA-203ENST00000396603 STAG3L1P0CL83 205 aa18.58■□□□□ 0.56
CLTA-203ENST00000396603 BTG3Q14201 252 aaPredicted RBP18.58■□□□□ 0.56
CLTA-203ENST00000396603 PLCB4Q15147 1175 aa18.58■□□□□ 0.56
CLTA-203ENST00000396603 CTC1Q2NKJ3 1217 aa18.58■□□□□ 0.56
CLTA-203ENST00000396603 NPAS4Q8IUM7 802 aa18.58■□□□□ 0.56
CLTA-203ENST00000396603 LRRC2Q9BYS8 371 aa18.58■□□□□ 0.56
CLTA-203ENST00000396603 PKD2L1Q9P0L9 805 aa18.58■□□□□ 0.56
CLTA-203ENST00000396603 COL1A2P08123 1366 aa18.57■□□□□ 0.56
CLTA-203ENST00000396603 CCDC196A0A1B0GTZ2 297 aa18.57■□□□□ 0.56
CLTA-203ENST00000396603 STXBP3O00186 592 aa18.57■□□□□ 0.56
CLTA-203ENST00000396603 IL9P15248 144 aa18.57■□□□□ 0.56
CLTA-203ENST00000396603 IGBP1P78318 339 aa18.57■□□□□ 0.56
CLTA-203ENST00000396603 ODR4Q5SWX8 454 aa18.57■□□□□ 0.56
CLTA-203ENST00000396603 TYW1BQ6NUM6 668 aa18.57■□□□□ 0.56
CLTA-203ENST00000396603 PPP2R3CQ969Q6 453 aa18.57■□□□□ 0.56
CLTA-203ENST00000396603 AGO3Q9H9G7 860 aaKnown RBP18.57■□□□□ 0.56
CLTA-203ENST00000396603 CD320Q9NPF0 282 aa18.57■□□□□ 0.56
CLTA-203ENST00000396603 C11orf16Q9NQ32 467 aa18.57■□□□□ 0.56
CLTA-203ENST00000396603 TTC3P53804 2025 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 ESYT2A0FGR8 921 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 POTEB3A0JP26 581 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 SMCO2A6NFE2 343 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 PRR33A8MZF0 331 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 HBP1O60381 514 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 CYP3A4P08684 503 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 CD52P31358 61 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 PAK2Q13177 524 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 ITGB3BPQ13352 177 aaPredicted RBP18.56■□□□□ 0.56
CLTA-203ENST00000396603 FAM160B1Q5W0V3 765 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 POTEBQ6S5H4 581 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 RAB11FIP4Q86YS3 637 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 CYP2W1Q8TAV3 490 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 LINC01599Q8WXQ3 324 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 KHSRPQ92945 711 aaKnown RBP eCLIP18.56■□□□□ 0.56
CLTA-203ENST00000396603 CELF4Q9BZC1 486 aaKnown RBP18.56■□□□□ 0.56
CLTA-203ENST00000396603 FAM49AQ9H0Q0 323 aaPredicted RBP18.56■□□□□ 0.56
CLTA-203ENST00000396603 RAPGEFL1Q9UHV5 662 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 PADI3Q9ULW8 664 aa18.56■□□□□ 0.56
CLTA-203ENST00000396603 V9GY48 417 aaPredicted RBP18.56■□□□□ 0.56
CLTA-203ENST00000396603 GOLGA8AA7E2F4 631 aa18.55■□□□□ 0.56
CLTA-203ENST00000396603 GOLGA8BA8MQT2 603 aa18.55■□□□□ 0.56
CLTA-203ENST00000396603 ARP10275 920 aa18.55■□□□□ 0.56
CLTA-203ENST00000396603 SETQ01105 290 aaPredicted RBP18.55■□□□□ 0.56
CLTA-203ENST00000396603 MTHFD1LQ6UB35 978 aa18.55■□□□□ 0.56
CLTA-203ENST00000396603 ABHD15Q6UXT9 468 aa18.55■□□□□ 0.56
CLTA-203ENST00000396603 ATP8B4Q8TF62 1192 aa18.55■□□□□ 0.56
CLTA-203ENST00000396603 CCDC12Q8WUD4 166 aaPredicted RBP18.55■□□□□ 0.56
CLTA-203ENST00000396603 CRYGNQ8WXF5 182 aa18.55■□□□□ 0.56
CLTA-203ENST00000396603 CLDND1Q9NY35 253 aa18.55■□□□□ 0.56
CLTA-203ENST00000396603 BRPF3Q9ULD4 1205 aa18.55■□□□□ 0.56
CLTA-203ENST00000396603 NID2Q14112 1375 aa18.55■□□□□ 0.56
CLTA-203ENST00000396603 C19orf67A6NJJ6 358 aa18.54■□□□□ 0.56
CLTA-203ENST00000396603 H3BQ06 376 aaPredicted RBP18.54■□□□□ 0.56
CLTA-203ENST00000396603 GRM6O15303 877 aa18.54■□□□□ 0.56
CLTA-203ENST00000396603 REC8O95072 547 aa18.54■□□□□ 0.56
CLTA-203ENST00000396603 SCG2P13521 617 aa18.54■□□□□ 0.56
CLTA-203ENST00000396603 SSTR3P32745 418 aaPredicted RBP18.54■□□□□ 0.56
CLTA-203ENST00000396603 KRT76Q01546 638 aa18.54■□□□□ 0.56
CLTA-203ENST00000396603 PFKFB3Q16875 520 aaPredicted RBP18.54■□□□□ 0.56
CLTA-203ENST00000396603 ZNF484Q5JVG2 852 aa18.54■□□□□ 0.56
CLTA-203ENST00000396603 ADHFE1Q8IWW8 467 aa18.54■□□□□ 0.56
CLTA-203ENST00000396603 ZNF710Q8N1W2 664 aa18.54■□□□□ 0.56
CLTA-203ENST00000396603 FBXL16Q8N461 479 aa18.54■□□□□ 0.56
CLTA-203ENST00000396603 POP1Q99575 1024 aaKnown RBP18.54■□□□□ 0.56
CLTA-203ENST00000396603 TBC1D22BQ9NU19 505 aa18.54■□□□□ 0.56
CLTA-203ENST00000396603 PLAGL2Q9UPG8 496 aa18.54■□□□□ 0.56
CLTA-203ENST00000396603 KLF18A0A0U1RQI7 1052 aa18.53■□□□□ 0.56
CLTA-203ENST00000396603 FSD2A1L4K1 749 aa18.53■□□□□ 0.56
CLTA-203ENST00000396603 ZNF76P36508 570 aa18.53■□□□□ 0.56
CLTA-203ENST00000396603 LTBRP36941 435 aa18.53■□□□□ 0.56
CLTA-203ENST00000396603 ZP2Q05996 745 aa18.53■□□□□ 0.56
CLTA-203ENST00000396603 HYAL1Q12794 435 aa18.53■□□□□ 0.56
CLTA-203ENST00000396603 SMAD2Q15796 467 aaKnown RBP18.53■□□□□ 0.56
CLTA-203ENST00000396603 MIS18BP1Q6P0N0 1132 aa18.53■□□□□ 0.56
CLTA-203ENST00000396603 RTN4RL1Q86UN2 441 aaPredicted RBP18.53■□□□□ 0.56
CLTA-203ENST00000396603 SMAP1Q8IYB5 467 aaPredicted RBP18.53■□□□□ 0.56
CLTA-203ENST00000396603 UPF3BQ9BZI7 483 aaKnown RBP18.53■□□□□ 0.56
CLTA-203ENST00000396603 ZMYND12Q9H0C1 365 aa18.53■□□□□ 0.56
CLTA-203ENST00000396603 C1orf112Q9NSG2 853 aa18.53■□□□□ 0.56
CLTA-203ENST00000396603 FAM217BQ9NTX9 383 aaPredicted RBP18.53■□□□□ 0.56
CLTA-203ENST00000396603 IGLV3-22A0A075B6J6 115 aa18.52■□□□□ 0.56
CLTA-203ENST00000396603 IPO5O00410 1097 aaKnown RBP18.52■□□□□ 0.56
CLTA-203ENST00000396603 DCXO43602 365 aa18.52■□□□□ 0.56
CLTA-203ENST00000396603 SARSP49591 514 aaKnown RBP18.52■□□□□ 0.56
CLTA-203ENST00000396603 SMAD4Q13485 552 aaKnown RBP18.52■□□□□ 0.56
CLTA-203ENST00000396603 ZNF746Q6NUN9 644 aaPredicted RBP18.52■□□□□ 0.56
CLTA-203ENST00000396603 ZNF302Q9NR11 478 aa18.52■□□□□ 0.56
CLTA-203ENST00000396603 MRPL42Q9Y6G3 142 aaKnown RBP18.52■□□□□ 0.56
CLTA-203ENST00000396603 FAM86B1E9PN63 330 aa18.51■□□□□ 0.55
CLTA-203ENST00000396603 BACH1O14867 736 aa18.51■□□□□ 0.55
CLTA-203ENST00000396603 GPR182O15218 404 aa18.51■□□□□ 0.55
CLTA-203ENST00000396603 DHX15O43143 795 aaKnown RBP18.51■□□□□ 0.55
CLTA-203ENST00000396603 EPB41L2O43491 1005 aaKnown RBP18.51■□□□□ 0.55
CLTA-203ENST00000396603 CCNE2O96020 404 aa18.51■□□□□ 0.55
CLTA-203ENST00000396603 FAM86B2P0C5J1 330 aa18.51■□□□□ 0.55
CLTA-203ENST00000396603 KLRC1P26715 233 aa18.51■□□□□ 0.55
CLTA-203ENST00000396603 GNA11P29992 359 aa18.51■□□□□ 0.55
CLTA-203ENST00000396603 CDC27P30260 824 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms