RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 MARCH8Q5T0T0 291 aa18.59■□□□□ 0.57
DDR1-229ENST00000396342 SPOUT1Q5T280 376 aaKnown RBP18.59■□□□□ 0.57
DDR1-229ENST00000396342 CPLX2Q6PUV4 134 aaKnown RBP18.59■□□□□ 0.57
DDR1-229ENST00000396342 Q6ZUG5 572 aa18.59■□□□□ 0.57
DDR1-229ENST00000396342 TRIM22Q8IYM9 498 aa18.59■□□□□ 0.57
DDR1-229ENST00000396342 BRF1Q92994 677 aa18.59■□□□□ 0.57
DDR1-229ENST00000396342 AAASQ9NRG9 546 aa18.59■□□□□ 0.57
DDR1-229ENST00000396342 TELO2Q9Y4R8 837 aa18.59■□□□□ 0.57
DDR1-229ENST00000396342 PCDHB7Q9Y5E2 793 aa18.59■□□□□ 0.57
DDR1-229ENST00000396342 PRRC2BQ5JSZ5 2229 aaKnown RBP18.59■□□□□ 0.57
DDR1-229ENST00000396342 MYH7BA7E2Y1 1941 aa18.59■□□□□ 0.57
DDR1-229ENST00000396342 COL1A2P08123 1366 aa18.58■□□□□ 0.57
DDR1-229ENST00000396342 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.58■□□□□ 0.56
DDR1-229ENST00000396342 ESYT2A0FGR8 921 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 GPR182O15218 404 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 IBSPP21815 317 aaPredicted RBP18.58■□□□□ 0.56
DDR1-229ENST00000396342 KLRC1P26715 233 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 TMOD1P28289 359 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 TMEM62Q0P6H9 643 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 APOBRQ0VD83 1088 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 ADCK5Q3MIX3 580 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 NAALADL2Q58DX5 795 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 MTHFD1LQ6UB35 978 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 SMAP1Q8IYB5 467 aaPredicted RBP18.58■□□□□ 0.56
DDR1-229ENST00000396342 CYP2W1Q8TAV3 490 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 ATP8B4Q8TF62 1192 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 PABPC5Q96DU9 382 aaKnown RBP18.58■□□□□ 0.56
DDR1-229ENST00000396342 FAM167AQ96KS9 214 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 C22orf23Q9BZE7 217 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 TMEM260Q9NX78 707 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 CLDND1Q9NY35 253 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 TET1Q8NFU7 2136 aa18.58■□□□□ 0.56
DDR1-229ENST00000396342 CPLX1O14810 134 aa18.57■□□□□ 0.56
DDR1-229ENST00000396342 RPS6KA5O75582 802 aa18.57■□□□□ 0.56
DDR1-229ENST00000396342 ADD1P35611 737 aaKnown RBP18.57■□□□□ 0.56
DDR1-229ENST00000396342 CSPP1Q1MSJ5 1256 aa18.57■□□□□ 0.56
DDR1-229ENST00000396342 TCEAL5Q5H9L2 206 aa18.57■□□□□ 0.56
DDR1-229ENST00000396342 ZNF746Q6NUN9 644 aaPredicted RBP18.57■□□□□ 0.56
DDR1-229ENST00000396342 SWSAP1Q6NVH7 229 aa18.57■□□□□ 0.56
DDR1-229ENST00000396342 CMTR2Q8IYT2 770 aaKnown RBP18.57■□□□□ 0.56
DDR1-229ENST00000396342 RASEFQ8IZ41 740 aa18.57■□□□□ 0.56
DDR1-229ENST00000396342 GJD3Q8N144 294 aa18.57■□□□□ 0.56
DDR1-229ENST00000396342 ZNF710Q8N1W2 664 aa18.57■□□□□ 0.56
DDR1-229ENST00000396342 METTL13Q8N6R0 699 aa18.57■□□□□ 0.56
DDR1-229ENST00000396342 MAP7D2Q96T17 732 aa18.57■□□□□ 0.56
DDR1-229ENST00000396342 PADI3Q9ULW8 664 aa18.57■□□□□ 0.56
DDR1-229ENST00000396342 IGSF9BQ9UPX0 1349 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 C5orf67F2Z3F1 127 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 PRPF3O43395 683 aaKnown RBP18.56■□□□□ 0.56
DDR1-229ENST00000396342 ATG7O95352 703 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 CYP3A4P08684 503 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 ALADP13716 330 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 CDC27P30260 824 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 FUT2Q10981 343 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 ITGB3BPQ13352 177 aaPredicted RBP18.56■□□□□ 0.56
DDR1-229ENST00000396342 PRR16Q569H4 304 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 TRAPPC12Q8WVT3 735 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 BBXQ8WY36 941 aaPredicted RBP18.56■□□□□ 0.56
DDR1-229ENST00000396342 SCLT1Q96NL6 688 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 PCYT2Q99447 389 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 POP1Q99575 1024 aaKnown RBP18.56■□□□□ 0.56
DDR1-229ENST00000396342 UPF3BQ9BZI7 483 aaKnown RBP18.56■□□□□ 0.56
DDR1-229ENST00000396342 ZMYND12Q9H0C1 365 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 C1orf112Q9NSG2 853 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 NRBP2Q9NSY0 501 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 PCDHB12Q9Y5F1 795 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 PCDHA10Q9Y5I2 948 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 CHD9Q3L8U1 2897 aa18.56■□□□□ 0.56
DDR1-229ENST00000396342 H3BQ06 376 aaPredicted RBP18.55■□□□□ 0.56
DDR1-229ENST00000396342 MAGEB2O15479 319 aa18.55■□□□□ 0.56
DDR1-229ENST00000396342 DGKIO75912 1065 aa18.55■□□□□ 0.56
DDR1-229ENST00000396342 CLK2P49760 499 aaKnown RBP18.55■□□□□ 0.56
DDR1-229ENST00000396342 NLRP5P59047 1200 aa18.55■□□□□ 0.56
DDR1-229ENST00000396342 TYW1BQ6NUM6 668 aa18.55■□□□□ 0.56
DDR1-229ENST00000396342 ABHD15Q6UXT9 468 aa18.55■□□□□ 0.56
DDR1-229ENST00000396342 FAM122AQ96E09 287 aa18.55■□□□□ 0.56
DDR1-229ENST00000396342 KDM3AQ9Y4C1 1321 aa18.54■□□□□ 0.56
DDR1-229ENST00000396342 FSD2A1L4K1 749 aa18.54■□□□□ 0.56
DDR1-229ENST00000396342 WDR64B1ANS9 1081 aa18.54■□□□□ 0.56
DDR1-229ENST00000396342 NEFLP07196 543 aa18.54■□□□□ 0.56
DDR1-229ENST00000396342 RPS6KB1P23443 525 aa18.54■□□□□ 0.56
DDR1-229ENST00000396342 HSPA4P34932 840 aa18.54■□□□□ 0.56
DDR1-229ENST00000396342 PAN2Q504Q3 1202 aaKnown RBP18.54■□□□□ 0.56
DDR1-229ENST00000396342 TRMT1LQ7Z2T5 733 aaKnown RBP18.54■□□□□ 0.56
DDR1-229ENST00000396342 FAM178BQ8IXR5 827 aa18.54■□□□□ 0.56
DDR1-229ENST00000396342 MICAL1Q8TDZ2 1067 aa18.54■□□□□ 0.56
DDR1-229ENST00000396342 CLP1Q92989 425 aaKnown RBP18.54■□□□□ 0.56
DDR1-229ENST00000396342 P2RX5Q93086 422 aa18.54■□□□□ 0.56
DDR1-229ENST00000396342 SLC26A6Q9BXS9 759 aa18.54■□□□□ 0.56
DDR1-229ENST00000396342 RNF26Q9BY78 433 aaPredicted RBP18.54■□□□□ 0.56
DDR1-229ENST00000396342 OSBPL7Q9BZF2 842 aa18.54■□□□□ 0.56
DDR1-229ENST00000396342 AGO3Q9H9G7 860 aaKnown RBP18.54■□□□□ 0.56
DDR1-229ENST00000396342 PRKAG3Q9UGI9 489 aa18.54■□□□□ 0.56
DDR1-229ENST00000396342 GRXCR2A6NFK2 248 aa18.53■□□□□ 0.56
DDR1-229ENST00000396342 FAM86B1E9PN63 330 aa18.53■□□□□ 0.56
DDR1-229ENST00000396342 CSPG5O95196 566 aa18.53■□□□□ 0.56
DDR1-229ENST00000396342 FAM86B2P0C5J1 330 aa18.53■□□□□ 0.56
DDR1-229ENST00000396342 ZSCAN20P17040 1043 aaPredicted RBP18.53■□□□□ 0.56
DDR1-229ENST00000396342 SARSP49591 514 aaKnown RBP18.53■□□□□ 0.56
DDR1-229ENST00000396342 COL9A3Q14050 684 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms