RNA–Protein interactions for RNA: ENST00000395432.6

PCDH15-208, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 6,901 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-208	ENST00000395432	C10orf67	Q8IYJ2	551 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	RMDN3	Q96TC7	470 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	CITED1	Q99966	193 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	RIOK1	Q9BRS2	568 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	CAAP1	Q9H8G2	361 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	RIC8A	Q9NPQ8	531 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PIH1D3	Q9NQM4	214 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	TFCP2L1	Q9NZI6	479 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	UBP1	Q9NZI7	540 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	VPS18	Q9P253	973 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PRKAB1	Q9Y478	270 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	FAM170A	A1A519	330 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PTGES3L	E9PB15	166 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	CCDC192	P0DO97	292 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	SCP2	P22307	547 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	EIF6	P56537	245 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	UBE2K	P61086	200 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PLD1	Q13393	1074 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	CCDC84	Q86UT8	332 aa	Predicted RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PPFIBP2	Q8ND30	876 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	LZIC	Q8WZA0	190 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	ARHGEF2	Q92974	986 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	ZNF566	Q969W8	418 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	NSUN5	Q96P11	429 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	SRCIN1	Q9C0H9	1055 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PLEKHA5	Q9HAU0	1116 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	SLC5A4	Q9NY91	659 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	MAGEL2	Q9UJ55	1249 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	RPH3A	Q9Y2J0	694 aa	Predicted RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	SALL3	Q9BXA9	1300 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PDE8A	O60658	829 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PDGFRB	P09619	1106 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	CCDC172	P0C7W6	258 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	ATP1A3	P13637	1013 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	OTUD4	Q01804	1114 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	SRSF11	Q05519	484 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	DCTN2	Q13561	401 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	NFIL3	Q16649	462 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	LRRN4CL	Q8ND94	238 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	TAF4B	Q92750	862 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	FERMT1	Q9BQL6	677 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	KLHL4	Q9C0H6	718 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	BHMT2	Q9H2M3	363 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	SPON1	Q9HCB6	807 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	TEKT2	Q9UIF3	430 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	AXIN2	Q9Y2T1	843 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	NOC2L	Q9Y3T9	749 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PCDHB14	Q9Y5E9	798 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PCDHGB3	Q9Y5G1	929 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	FAM83G	A6ND36	823 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	RHPN2P1	A8MT19	583 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	EXOC5	O00471	708 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	USP17L7	P0C7H9	530 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	INPP5B	P32019	993 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	MAP2K2	P36507	400 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	TTF1	Q15361	905 aa	Predicted RBP	4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	ICE2	Q659A1	982 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	RPUSD2	Q8IZ73	545 aa	Known RBP	4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	SETD6	Q8TBK2	473 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	DDX54	Q8TDD1	881 aa	Known RBP	4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	ZNF830	Q96NB3	372 aa	Predicted RBP	4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	THAP9	Q9H5L6	903 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	BEX1	Q9HBH7	125 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	DNAJC28	Q9NX36	388 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	EMC3	Q9P0I2	261 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	NR2E3	Q9Y5X4	410 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	MPO	P05164	745 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	MCM7	P33993	719 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	FILIP1L	Q4L180	1135 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	SNRNP48	Q6IEG0	339 aa	Known RBP	4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	PHLDB3	Q6NSJ2	640 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	EEPD1	Q7L9B9	569 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	STK32C	Q86UX6	486 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	VSIG1	Q86XK7	387 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	NUDCD3	Q8IVD9	361 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	FBF1	Q8TES7	1133 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	PRPF18	Q99633	342 aa	Known RBP	4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	EXO5	Q9H790	373 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	TRIM36	Q9NQ86	728 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	RHBDL2	Q9NX52	303 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	ADAMTS8	Q9UP79	889 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	FHOD1	Q9Y613	1164 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432		A0A0G2JMZ2	1700 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	NVL	O15381	856 aa	Known RBP	4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	SASH3	O75995	380 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	ETV5	P41161	510 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	PLA2G4A	P47712	749 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	RBM6	P78332	1123 aa	Known RBP	4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	TMEM132B	Q14DG7	1078 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	AMOT	Q4VCS5	1084 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	ZBTB41	Q5SVQ8	909 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	FYB2	Q5VWT5	728 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	DUSP27	Q5VZP5	1158 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	SPATS2	Q86XZ4	545 aa	Known RBP	4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	GRAMD1A	Q96CP6	724 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	DESI2	Q9BSY9	194 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	UNC45A	Q9H3U1	944 aa		4.04	□□□□□ -1.76
PCDH15-208	ENST00000395432	VPS37B	Q9H9H4	285 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms