RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 ADD1P35611 737 aaKnown RBP21.94■■□□□ 1.1
COL11A2-204ENST00000395194 BMPR1AP36894 532 aa21.94■■□□□ 1.1
COL11A2-204ENST00000395194 APOBRQ0VD83 1088 aa21.94■■□□□ 1.1
COL11A2-204ENST00000395194 AP3B2Q13367 1082 aa21.94■■□□□ 1.1
COL11A2-204ENST00000395194 TMEM266Q2M3C6 531 aa21.94■■□□□ 1.1
COL11A2-204ENST00000395194 PAN2Q504Q3 1202 aaKnown RBP21.94■■□□□ 1.1
COL11A2-204ENST00000395194 POTEBQ6S5H4 581 aa21.94■■□□□ 1.1
COL11A2-204ENST00000395194 RTN4RL1Q86UN2 441 aaPredicted RBP21.94■■□□□ 1.1
COL11A2-204ENST00000395194 NEK9Q8TD19 979 aa21.94■■□□□ 1.1
COL11A2-204ENST00000395194 C11orf84Q9BUA3 381 aaPredicted RBP21.94■■□□□ 1.1
COL11A2-204ENST00000395194 GINS2Q9Y248 185 aa21.94■■□□□ 1.1
COL11A2-204ENST00000395194 PCDHA2Q9Y5H9 948 aa21.94■■□□□ 1.1
COL11A2-204ENST00000395194 FAM86B1E9PN63 330 aa21.93■■□□□ 1.1
COL11A2-204ENST00000395194 hCG_1984214I3L0E3 225 aa21.93■■□□□ 1.1
COL11A2-204ENST00000395194 MEIS1O00470 390 aa21.93■■□□□ 1.1
COL11A2-204ENST00000395194 FAM86B2P0C5J1 330 aa21.93■■□□□ 1.1
COL11A2-204ENST00000395194 CLK2P49760 499 aaKnown RBP21.93■■□□□ 1.1
COL11A2-204ENST00000395194 PAK2Q13177 524 aa21.93■■□□□ 1.1
COL11A2-204ENST00000395194 KRT32Q14532 448 aa21.93■■□□□ 1.1
COL11A2-204ENST00000395194 TMEM31Q5JXX7 168 aa21.93■■□□□ 1.1
COL11A2-204ENST00000395194 PLPPR4Q7Z2D5 763 aa21.93■■□□□ 1.1
COL11A2-204ENST00000395194 PLA2G4DQ86XP0 818 aa21.93■■□□□ 1.1
COL11A2-204ENST00000395194 ZNF713Q8N859 430 aaPredicted RBP21.93■■□□□ 1.1
COL11A2-204ENST00000395194 ZNF689Q96CS4 500 aaPredicted RBP21.93■■□□□ 1.1
COL11A2-204ENST00000395194 PABPC5Q96DU9 382 aaKnown RBP21.93■■□□□ 1.1
COL11A2-204ENST00000395194 PADI3Q9ULW8 664 aa21.93■■□□□ 1.1
COL11A2-204ENST00000395194 GRXCR2A6NFK2 248 aa21.92■■□□□ 1.1
COL11A2-204ENST00000395194 C5orf67F2Z3F1 127 aa21.92■■□□□ 1.1
COL11A2-204ENST00000395194 PPFIA3O75145 1194 aa21.92■■□□□ 1.1
COL11A2-204ENST00000395194 DGKIO75912 1065 aa21.92■■□□□ 1.1
COL11A2-204ENST00000395194 GATMP50440 423 aa21.92■■□□□ 1.1
COL11A2-204ENST00000395194 METAP2P50579 478 aaKnown RBP eCLIP21.92■■□□□ 1.1
COL11A2-204ENST00000395194 CLUL1Q15846 466 aa21.92■■□□□ 1.1
COL11A2-204ENST00000395194 TSGA10IPQ3SY00 556 aa21.92■■□□□ 1.1
COL11A2-204ENST00000395194 MTHFD1LQ6UB35 978 aa21.92■■□□□ 1.1
COL11A2-204ENST00000395194 Q6ZUG5 572 aa21.92■■□□□ 1.1
COL11A2-204ENST00000395194 TRMT1LQ7Z2T5 733 aaKnown RBP21.92■■□□□ 1.1
COL11A2-204ENST00000395194 CCDC60Q8IWA6 550 aaPredicted RBP21.92■■□□□ 1.1
COL11A2-204ENST00000395194 GJD3Q8N144 294 aa21.92■■□□□ 1.1
COL11A2-204ENST00000395194 PPP1R16BQ96T49 567 aa21.92■■□□□ 1.1
COL11A2-204ENST00000395194 CELF4Q9BZC1 486 aaKnown RBP21.92■■□□□ 1.1
COL11A2-204ENST00000395194 ALG13Q9NP73 1137 aaKnown RBP21.92■■□□□ 1.1
COL11A2-204ENST00000395194 RWDD3Q9Y3V2 267 aa21.92■■□□□ 1.1
COL11A2-204ENST00000395194 MRPL42Q9Y6G3 142 aaKnown RBP21.92■■□□□ 1.1
COL11A2-204ENST00000395194 PLXNA4Q9HCM2 1894 aa21.92■■□□□ 1.1
COL11A2-204ENST00000395194 IGSF9BQ9UPX0 1349 aa21.91■■□□□ 1.1
COL11A2-204ENST00000395194 ATG7O95352 703 aa21.91■■□□□ 1.1
COL11A2-204ENST00000395194 RB1P06400 928 aa21.91■■□□□ 1.1
COL11A2-204ENST00000395194 PFKFB3Q16875 520 aaPredicted RBP21.91■■□□□ 1.1
COL11A2-204ENST00000395194 TNPO1Q92973 898 aaKnown RBP21.91■■□□□ 1.1
COL11A2-204ENST00000395194 CLP1Q92989 425 aaKnown RBP21.91■■□□□ 1.1
COL11A2-204ENST00000395194 JAKMIP1Q96N16 626 aaKnown RBP21.91■■□□□ 1.1
COL11A2-204ENST00000395194 C11orf16Q9NQ32 467 aa21.91■■□□□ 1.1
COL11A2-204ENST00000395194 FNDC1Q4ZHG4 1894 aaPredicted RBP21.91■■□□□ 1.1
COL11A2-204ENST00000395194 SMIM35A0A1B0GVV1 85 aa21.9■■□□□ 1.1
COL11A2-204ENST00000395194 RPLP2P05387 115 aaKnown RBP21.9■■□□□ 1.1
COL11A2-204ENST00000395194 SCG2P13521 617 aa21.9■■□□□ 1.1
COL11A2-204ENST00000395194 KLRC1P26715 233 aa21.9■■□□□ 1.1
COL11A2-204ENST00000395194 GTF2F1P35269 517 aaKnown RBP eCLIP21.9■■□□□ 1.1
COL11A2-204ENST00000395194 KRT76Q01546 638 aa21.9■■□□□ 1.1
COL11A2-204ENST00000395194 NFX1Q12986 1120 aaKnown RBP21.9■■□□□ 1.1
COL11A2-204ENST00000395194 FAM160B1Q5W0V3 765 aa21.9■■□□□ 1.1
COL11A2-204ENST00000395194 PDXDC2PQ6P474 469 aa21.9■■□□□ 1.1
COL11A2-204ENST00000395194 ABHD15Q6UXT9 468 aa21.9■■□□□ 1.1
COL11A2-204ENST00000395194 NPAS4Q8IUM7 802 aa21.9■■□□□ 1.1
COL11A2-204ENST00000395194 BRF1Q92994 677 aa21.9■■□□□ 1.1
COL11A2-204ENST00000395194 FTHL17Q9BXU8 183 aa21.9■■□□□ 1.1
COL11A2-204ENST00000395194 GLT8D2Q9H1C3 349 aa21.9■■□□□ 1.1
COL11A2-204ENST00000395194 IGFLR1Q9H665 355 aa21.9■■□□□ 1.1
COL11A2-204ENST00000395194 ZNF302Q9NR11 478 aa21.9■■□□□ 1.1
COL11A2-204ENST00000395194 IGLV3-22A0A075B6J6 115 aa21.89■■□□□ 1.09
COL11A2-204ENST00000395194 IGKV6D-21A0A0A0MT36 114 aa21.89■■□□□ 1.09
COL11A2-204ENST00000395194 HYAL1Q12794 435 aa21.89■■□□□ 1.09
COL11A2-204ENST00000395194 RASGRP4Q8TDF6 673 aa21.89■■□□□ 1.09
COL11A2-204ENST00000395194 ATP8B4Q8TF62 1192 aa21.89■■□□□ 1.09
COL11A2-204ENST00000395194 LMAN2LQ9H0V9 348 aa21.89■■□□□ 1.09
COL11A2-204ENST00000395194 TMX1Q9H3N1 280 aa21.89■■□□□ 1.09
COL11A2-204ENST00000395194 CDHR5Q9HBB8 845 aa21.89■■□□□ 1.09
COL11A2-204ENST00000395194 SQORQ9Y6N5 450 aa21.89■■□□□ 1.09
COL11A2-204ENST00000395194 PI4K2BG5E9Z4 385 aa21.88■■□□□ 1.09
COL11A2-204ENST00000395194 IPO5O00410 1097 aaKnown RBP21.88■■□□□ 1.09
COL11A2-204ENST00000395194 DHX15O43143 795 aaKnown RBP21.88■■□□□ 1.09
COL11A2-204ENST00000395194 HBP1O60381 514 aa21.88■■□□□ 1.09
COL11A2-204ENST00000395194 HMGB1P09429 215 aaKnown RBP21.88■■□□□ 1.09
COL11A2-204ENST00000395194 LTBRP36941 435 aa21.88■■□□□ 1.09
COL11A2-204ENST00000395194 RCAN1P53805 252 aa21.88■■□□□ 1.09
COL11A2-204ENST00000395194 DLX2Q07687 328 aaPredicted RBP21.88■■□□□ 1.09
COL11A2-204ENST00000395194 SWSAP1Q6NVH7 229 aa21.88■■□□□ 1.09
COL11A2-204ENST00000395194 MIS18BP1Q6P0N0 1132 aa21.88■■□□□ 1.09
COL11A2-204ENST00000395194 NIPA1Q7RTP0 329 aa21.88■■□□□ 1.09
COL11A2-204ENST00000395194 CMTR2Q8IYT2 770 aaKnown RBP21.88■■□□□ 1.09
COL11A2-204ENST00000395194 PHKBQ93100 1093 aa21.88■■□□□ 1.09
COL11A2-204ENST00000395194 ZNF577Q9BSK1 485 aa21.88■■□□□ 1.09
COL11A2-204ENST00000395194 LRFN2Q9ULH4 789 aa21.88■■□□□ 1.09
COL11A2-204ENST00000395194 KDM3AQ9Y4C1 1321 aa21.87■■□□□ 1.09
COL11A2-204ENST00000395194 LINC01565O15544 149 aa21.87■■□□□ 1.09
COL11A2-204ENST00000395194 MGEA5O60502 916 aa21.87■■□□□ 1.09
COL11A2-204ENST00000395194 MMP1P03956 469 aa21.87■■□□□ 1.09
COL11A2-204ENST00000395194 STAG3L1P0CL83 205 aa21.87■■□□□ 1.09
COL11A2-204ENST00000395194 PLA2G5P39877 138 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms