RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 EME2A4GXA9 379 aaPredicted RBP9.59□□□□□ -0.87
RTN4-206ENST00000394611 ZNF233A6NK53 670 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 PSMD14O00487 310 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 TNFAIP3P21580 790 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 PRDX5P30044 214 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 HSD17B3P37058 310 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 SETDB1Q15047 1291 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 LONRF1Q17RB8 773 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 FAM83BQ5T0W9 1011 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 KAZNQ674X7 775 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 WDR93Q6P2C0 686 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 ALKBH5Q6P6C2 394 aaKnown RBP9.59□□□□□ -0.87
RTN4-206ENST00000394611 PIK3R5Q8WYR1 880 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 NYXQ9GZU5 481 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 MTFR1LQ9H019 292 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 TAOK3Q9H2K8 898 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 ETNK1Q9HBU6 452 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 FAM53CQ9NYF3 392 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 PGRMC1O00264 195 aaKnown RBP9.59□□□□□ -0.87
RTN4-206ENST00000394611 CETN3O15182 167 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 SPAG7O75391 227 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 PRPF6O94906 941 aaKnown RBP9.59□□□□□ -0.87
RTN4-206ENST00000394611 RASIP1Q5U651 963 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 WDR59Q6PJI9 974 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 RAPGEF5Q92565 580 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 SAAL1Q96ER3 474 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 SH2D4AQ9H788 454 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 A0A087X0T9 212 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 PIAS1O75925 651 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 FAM228BP0C875 321 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 LIFRP42702 1097 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 RNASELQ05823 741 aaKnown RBP9.58□□□□□ -0.88
RTN4-206ENST00000394611 KCNB1Q14721 858 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 UBE3CQ15386 1083 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 FAM26FQ5R3K3 315 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 REXO1Q8N1G1 1221 aaKnown RBP9.58□□□□□ -0.88
RTN4-206ENST00000394611 PSMD1Q99460 953 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 DDX20Q9UHI6 824 aaKnown RBP9.58□□□□□ -0.88
RTN4-206ENST00000394611 AMFRQ9UKV5 643 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 NOC2LQ9Y3T9 749 aaKnown RBP9.58□□□□□ -0.88
RTN4-206ENST00000394611 DAAM1Q9Y4D1 1078 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 A8MUI8 341 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 TCP11X1B4DZS4 312 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 E9PMD0 336 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 C6orf229H3BNL8 230 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 ADAMTS3O15072 1205 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 ANP32DO95626 131 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 SCTRP47872 440 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 RCN2Q14257 317 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 ZYXQ15942 572 aaKnown RBP9.58□□□□□ -0.88
RTN4-206ENST00000394611 CCDC152Q4G0S7 254 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 MDH1BQ5I0G3 518 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 THEMIS2Q5TEJ8 643 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 HOOK3Q86VS8 718 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 DYDC2Q96IM9 177 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 PIGSQ96S52 555 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 METTL5Q9NRN9 209 aaKnown RBP9.58□□□□□ -0.88
RTN4-206ENST00000394611 PANK4Q9NVE7 773 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 SWAP70Q9UH65 585 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 RIMBP2O15034 1052 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 H2AFZP0C0S5 128 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 CHRNDQ07001 517 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 TMED2Q15363 201 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 H2AFVQ71UI9 128 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 MCUR1Q96AQ8 359 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 HAUS1Q96CS2 278 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 HEMGNQ9BXL5 484 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 ECT2Q9H8V3 914 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 PRM3Q9NNZ6 103 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 PPP1R1BQ9UD71 204 aaPredicted RBP9.58□□□□□ -0.88
RTN4-206ENST00000394611 RASAL2Q9UJF2 1139 aa9.58□□□□□ -0.88
RTN4-206ENST00000394611 DDX60Q8IY21 1712 aaKnown RBP9.58□□□□□ -0.88
RTN4-206ENST00000394611 HMGB1P1B2RPK0 211 aaPredicted RBP9.57□□□□□ -0.88
RTN4-206ENST00000394611 ATMINO43313 823 aaPredicted RBP9.57□□□□□ -0.88
RTN4-206ENST00000394611 CAND2O75155 1236 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 TDP2O95551 362 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 MDM2Q00987 491 aaPredicted RBP9.57□□□□□ -0.88
RTN4-206ENST00000394611 FAM182AQ5T1J6 154 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 ZC3H18Q86VM9 953 aaKnown RBP9.57□□□□□ -0.88
RTN4-206ENST00000394611 CREG2Q8IUH2 290 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 GLYCTKQ8IVS8 523 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 LRRC34Q8IZ02 419 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 ADSSL1Q8N142 457 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 RNF10Q8N5U6 811 aaKnown RBP9.57□□□□□ -0.88
RTN4-206ENST00000394611 LARP4BQ92615 738 aaKnown RBP9.57□□□□□ -0.88
RTN4-206ENST00000394611 DDX12PQ92771 950 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 PYM1Q9BRP8 204 aaKnown RBP9.57□□□□□ -0.88
RTN4-206ENST00000394611 PCIF1Q9H4Z3 704 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 DONSONQ9NYP3 566 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 TTC7AQ9ULT0 858 aaPredicted RBP9.57□□□□□ -0.88
RTN4-206ENST00000394611 SLC4A7Q9Y6M7 1214 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 IGF2BP3O00425 579 aaKnown RBP eCLIP9.57□□□□□ -0.886e-8■■□□□ 13.7
RTN4-206ENST00000394611 PDE8AO60658 829 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 HARSP12081 509 aaKnown RBP9.57□□□□□ -0.88
RTN4-206ENST00000394611 KRT5P13647 590 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 FLT3P36888 993 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 IFI16Q16666 785 aaKnown RBP9.57□□□□□ -0.88
RTN4-206ENST00000394611 MAN2A1Q16706 1144 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 CDKAL1Q5VV42 579 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 SPDYE1Q8NFV5 336 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms