RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 CDK17Q00537 523 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 GUCY1A3Q02108 690 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 SEMA3FQ13275 785 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 EMBQ6PCB8 327 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 FAM178BQ8IXR5 827 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 FAM186BQ8IYM0 893 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 RNF10Q8N5U6 811 aaKnown RBP11.52□□□□□ -0.57
ACTN1-203ENST00000394419 CCDC17Q96LX7 622 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 CSRNP1Q96S65 589 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 NAP1L4Q99733 375 aaKnown RBP11.52□□□□□ -0.57
ACTN1-203ENST00000394419 CHORDC1Q9UHD1 332 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-203ENST00000394419 FRMD4BQ9Y2L6 1034 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 BACH1O14867 736 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 TNFAIP3P21580 790 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 NT5C2P49902 561 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 DDR1Q08345 913 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 TMEM119Q4V9L6 283 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 ODR4Q5SWX8 454 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 ZFYVE27Q5T4F4 411 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 LRCH2Q5VUJ6 765 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 TAX1BP1Q86VP1 789 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 GLYCTKQ8IVS8 523 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 CTNNBL1Q8WYA6 563 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-203ENST00000394419 RAD51CO43502 376 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 BMP3P12645 472 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 SMARCA1P28370 1054 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 TRIM59Q8IWR1 403 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 AMACRQ9UHK6 382 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 E7EVH7 732 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 AKAP3O75969 853 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 NDUFB10O96000 172 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 COPB2P35606 906 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 SP4Q02446 784 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 ZNF211Q13398 564 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-203ENST00000394419 ORC2Q13416 577 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-203ENST00000394419 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-203ENST00000394419 SYDE2Q5VT97 1194 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 ZNF571Q7Z3V5 609 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-203ENST00000394419 OTUD6BQ8N6M0 293 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 LMBR1Q8WVP7 490 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 GLT8D2Q9H1C3 349 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 SNED1Q8TER0 1413 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 CASZ1Q86V15 1759 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 COL14A1Q05707 1796 aaKnown RBP11.51□□□□□ -0.57
ACTN1-203ENST00000394419 ROBO3Q96MS0 1386 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 ERLIN2O94905 339 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 MMP10P09238 476 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 NAB2Q15742 525 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 HGSNATQ68CP4 663 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 MIGA2Q7L4E1 593 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 DYDC2Q96IM9 177 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 EIF2AK1Q9BQI3 630 aaKnown RBP11.51□□□□□ -0.57
ACTN1-203ENST00000394419 RUSC1Q9BVN2 902 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 PLAAQ9Y263 795 aa11.51□□□□□ -0.57
ACTN1-203ENST00000394419 EP400Q96L91 3159 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 ARHGEF35A5YM69 484 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 FAM86B1E9PN63 330 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 AGPSO00116 658 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 NOL4O94818 638 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 FAM86B2P0C5J1 330 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 CCDC25Q86WR0 208 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 GIT2Q14161 759 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 KRT71Q3SY84 523 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 ARSHQ5FYA8 562 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 SP8Q8IXZ3 490 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 AENQ8WTP8 325 aaKnown RBP11.5□□□□□ -0.57
ACTN1-203ENST00000394419 FAM163AQ96GL9 167 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-203ENST00000394419 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.5□□□□□ -0.576e-7■■■■■ 31.5
ACTN1-203ENST00000394419 CTTNBP2NLQ9P2B4 639 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 DOCK2Q92608 1830 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 GRID2IPA4D2P6 1211 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 GCOM1H8Y6P7 765 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-203ENST00000394419 MYZAPP0CAP1 466 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 INPP5BP32019 993 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 USP11P51784 963 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 CASKIN2Q8WXE0 1202 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 HOOK2Q96ED9 719 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 GJD4Q96KN9 370 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-203ENST00000394419 CELF4Q9BZC1 486 aaKnown RBP11.5□□□□□ -0.57
ACTN1-203ENST00000394419 AMFRQ9UKV5 643 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 LRP5O75197 1615 aa11.5□□□□□ -0.57
ACTN1-203ENST00000394419 GAKO14976 1311 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 PGRMC1O00264 195 aaKnown RBP11.49□□□□□ -0.57
ACTN1-203ENST00000394419 SART1O43290 800 aaKnown RBP11.49□□□□□ -0.57
ACTN1-203ENST00000394419 FGGP02679 453 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 HNRNPH3P31942 346 aaKnown RBP11.49□□□□□ -0.57
ACTN1-203ENST00000394419 SEC24CP53992 1094 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 COG2Q14746 738 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 APOBEC3HQ6NTF7 200 aaKnown RBP11.49□□□□□ -0.57
ACTN1-203ENST00000394419 ZNF746Q6NUN9 644 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-203ENST00000394419 PPP1R18Q6NYC8 613 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 BANK1Q8NDB2 785 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 PURBQ96QR8 312 aaKnown RBP11.49□□□□□ -0.57
ACTN1-203ENST00000394419 ATP8A1Q9Y2Q0 1164 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 FAM169AQ9Y6X4 670 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 BCORQ6W2J9 1755 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 ROBO1Q9Y6N7 1651 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 MSH4O15457 936 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 DAPK3O43293 454 aa11.49□□□□□ -0.57
ACTN1-203ENST00000394419 KIF4AO95239 1232 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms