RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 NCALDP61601 193 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 PSMD2Q13200 908 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 GRAPQ13588 217 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 ZNF804AQ7Z570 1209 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 USP38Q8NB14 1042 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 GRAPLQ8TC17 118 aaPredicted RBP20.56■□□□□ 0.88
HOXC6-202ENST00000394331 ARHGEF1Q92888 912 aaKnown RBP20.56■□□□□ 0.88
HOXC6-202ENST00000394331 TRIM47Q96LD4 638 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 SAMD15Q9P1V8 674 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 CCNL1Q9UK58 526 aaPredicted RBP20.56■□□□□ 0.88
HOXC6-202ENST00000394331 RPS6KL1Q9Y6S9 549 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 MYH7BA7E2Y1 1941 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 CCDC88AQ3V6T2 1871 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 MTMR8Q96EF0 704 aa20.55■□□□□ 0.88
HOXC6-202ENST00000394331 DHTKD1Q96HY7 919 aaPredicted RBP20.55■□□□□ 0.88
HOXC6-202ENST00000394331 BARHL2Q9NY43 387 aa20.55■□□□□ 0.88
HOXC6-202ENST00000394331 SALL4Q9UJQ4 1053 aa20.55■□□□□ 0.88
HOXC6-202ENST00000394331 PCDHA6Q9UN73 950 aa20.55■□□□□ 0.88
HOXC6-202ENST00000394331 PCDHA8Q9Y5H6 950 aa20.55■□□□□ 0.88
HOXC6-202ENST00000394331 PLEKP08567 350 aaPredicted RBP20.55■□□□□ 0.88
HOXC6-202ENST00000394331 GALNTL6Q49A17 601 aa20.55■□□□□ 0.88
HOXC6-202ENST00000394331 SSU72P8A0A1W2PR75 194 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 LRRD1A4D1F6 860 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 USP17L3A6NCW0 530 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 USP17L4A6NCW7 530 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 CTNND1O60716 968 aaKnown RBP20.54■□□□□ 0.88
HOXC6-202ENST00000394331 EIF4A3P38919 411 aaKnown RBP20.54■□□□□ 0.88
HOXC6-202ENST00000394331 UBA7P41226 1012 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 PMS1P54277 932 aaKnown RBP20.54■□□□□ 0.88
HOXC6-202ENST00000394331 ASTE1Q2TB18 679 aaPredicted RBP20.54■□□□□ 0.88
HOXC6-202ENST00000394331 TYW1BQ6NUM6 668 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 ARHGAP27Q6ZUM4 889 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 PTF1AQ7RTS3 328 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 USP17L1Q7RTZ2 530 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 OR2W6PQ8NHA6 318 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 RASGRP4Q8TDF6 673 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 CCSER1Q9C0I3 900 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 LRRC42Q9Y546 428 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 RARAP10276 462 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 HLTFQ14527 1009 aaKnown RBP eCLIP20.54■□□□□ 0.88
HOXC6-202ENST00000394331 HEATR3Q7Z4Q2 680 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 BICD1Q96G01 975 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 NSRP1Q9H0G5 558 aaKnown RBP20.54■□□□□ 0.88
HOXC6-202ENST00000394331 CHCHD3Q9NX63 227 aaKnown RBP20.54■□□□□ 0.88
HOXC6-202ENST00000394331 CTNNAL1Q9UBT7 734 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 BAZ2BQ9UIF8 2168 aaKnown RBP20.54■□□□□ 0.88
HOXC6-202ENST00000394331 PALM3A6NDB9 673 aaPredicted RBP20.54■□□□□ 0.88
HOXC6-202ENST00000394331 BACH1O14867 736 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 AKR1B10O60218 316 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 SMIM24O75264 130 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 KLK7P49862 253 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 MIIPQ5JXC2 388 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 MEI1Q5TIA1 1274 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 C15orf52Q6ZUT6 534 aaKnown RBP20.54■□□□□ 0.88
HOXC6-202ENST00000394331 TGFBRAP1Q8WUH2 860 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 ATXN2LQ8WWM7 1075 aaKnown RBP20.54■□□□□ 0.88
HOXC6-202ENST00000394331 DTNBP1Q96EV8 351 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 ARHGEF3Q9NR81 526 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 AGAP1Q9UPQ3 857 aa20.54■□□□□ 0.88
HOXC6-202ENST00000394331 SART1O43290 800 aaKnown RBP20.53■□□□□ 0.88
HOXC6-202ENST00000394331 TRADDQ15628 312 aa20.53■□□□□ 0.88
HOXC6-202ENST00000394331 IFT74Q96LB3 600 aa20.53■□□□□ 0.88
HOXC6-202ENST00000394331 TMEM47Q9BQJ4 181 aa20.53■□□□□ 0.88
HOXC6-202ENST00000394331 STX8Q9UNK0 236 aa20.53■□□□□ 0.88
HOXC6-202ENST00000394331 TAF11Q15544 211 aa20.53■□□□□ 0.88
HOXC6-202ENST00000394331 DIXDC1Q155Q3 683 aa20.53■□□□□ 0.88
HOXC6-202ENST00000394331 SPATA21Q7Z572 469 aa20.53■□□□□ 0.88
HOXC6-202ENST00000394331 ERICH1Q86X53 443 aa20.53■□□□□ 0.88
HOXC6-202ENST00000394331 C2CD5Q86YS7 1000 aa20.53■□□□□ 0.88
HOXC6-202ENST00000394331 GIMAP8Q8ND71 665 aaPredicted RBP20.53■□□□□ 0.88
HOXC6-202ENST00000394331 RAB17Q9H0T7 212 aa20.53■□□□□ 0.88
HOXC6-202ENST00000394331 FBXL5Q9UKA1 691 aa20.53■□□□□ 0.88
HOXC6-202ENST00000394331 CYTH3O43739 400 aa20.52■□□□□ 0.88
HOXC6-202ENST00000394331 KCNJ2P63252 427 aa20.52■□□□□ 0.88
HOXC6-202ENST00000394331 INF2Q27J81 1249 aa20.52■□□□□ 0.88
HOXC6-202ENST00000394331 APBB1IPQ7Z5R6 666 aaPredicted RBP20.52■□□□□ 0.88
HOXC6-202ENST00000394331 BICDL2A1A5D9 508 aa20.52■□□□□ 0.88
HOXC6-202ENST00000394331 RHOBTB3O94955 611 aa20.52■□□□□ 0.88
HOXC6-202ENST00000394331 CDC25CP30307 473 aa20.52■□□□□ 0.88
HOXC6-202ENST00000394331 RFC4P35249 363 aa20.52■□□□□ 0.88
HOXC6-202ENST00000394331 PPP1R2P41236 205 aa20.52■□□□□ 0.88
HOXC6-202ENST00000394331 LACTBP83111 547 aaPredicted RBP20.52■□□□□ 0.88
HOXC6-202ENST00000394331 NAALADL2Q58DX5 795 aa20.52■□□□□ 0.88
HOXC6-202ENST00000394331 HOOK3Q86VS8 718 aa20.52■□□□□ 0.88
HOXC6-202ENST00000394331 DUSP9Q99956 384 aaKnown RBP20.52■□□□□ 0.88
HOXC6-202ENST00000394331 EDEM3Q9BZQ6 932 aa20.52■□□□□ 0.88
HOXC6-202ENST00000394331 CUEDC2Q9H467 287 aa20.52■□□□□ 0.88
HOXC6-202ENST00000394331 MAGEF1Q9HAY2 307 aa20.52■□□□□ 0.88
HOXC6-202ENST00000394331 DPPA5A6NC42 116 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 RNF8O76064 485 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 OAS1P00973 400 aaKnown RBP20.51■□□□□ 0.87
HOXC6-202ENST00000394331 RASA1P20936 1047 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 ALDH3A1P30838 453 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 MMP13P45452 471 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 ATP11AP98196 1134 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 ARHGAP22Q7Z5H3 698 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 TMC3Q7Z5M5 1100 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 B4GALNT2Q8NHY0 566 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 NGLY1Q96IV0 654 aa20.51■□□□□ 0.87
HOXC6-202ENST00000394331 PCMTD1Q96MG8 357 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms