RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 TRPC6Q9Y210 931 aa20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 PCDHA2Q9Y5H9 948 aa20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 MYH9P35579 1960 aaKnown RBP20.77■□□□□ 0.92
PDLIM7-205ENST00000393551 POTEB3A0JP26 581 aa20.77■□□□□ 0.92
PDLIM7-205ENST00000393551 ATP4AP20648 1035 aa20.77■□□□□ 0.92
PDLIM7-205ENST00000393551 PDIA3P30101 505 aaKnown RBP20.77■□□□□ 0.92
PDLIM7-205ENST00000393551 TMEM62Q0P6H9 643 aa20.77■□□□□ 0.92
PDLIM7-205ENST00000393551 TOB2Q14106 344 aaPredicted RBP20.77■□□□□ 0.92
PDLIM7-205ENST00000393551 POTEBQ6S5H4 581 aa20.77■□□□□ 0.92
PDLIM7-205ENST00000393551 RTN4RL1Q86UN2 441 aaPredicted RBP20.77■□□□□ 0.92
PDLIM7-205ENST00000393551 NCOA5Q9HCD5 579 aaKnown RBP20.77■□□□□ 0.92
PDLIM7-205ENST00000393551 IPO5O00410 1097 aaKnown RBP20.76■□□□□ 0.91
PDLIM7-205ENST00000393551 REC8O95072 547 aa20.76■□□□□ 0.91
PDLIM7-205ENST00000393551 CCT2P78371 535 aaKnown RBP20.76■□□□□ 0.91
PDLIM7-205ENST00000393551 AAK1Q2M2I8 961 aa20.76■□□□□ 0.91
PDLIM7-205ENST00000393551 MTHFD1LQ6UB35 978 aa20.76■□□□□ 0.91
PDLIM7-205ENST00000393551 TSHZ1Q6ZSZ6 1077 aa20.76■□□□□ 0.91
PDLIM7-205ENST00000393551 REXO1Q8N1G1 1221 aaKnown RBP20.76■□□□□ 0.91
PDLIM7-205ENST00000393551 CRIPAKQ8N1N5 446 aa20.76■□□□□ 0.91
PDLIM7-205ENST00000393551 ZSWIM6Q9HCJ5 1215 aa20.76■□□□□ 0.91
PDLIM7-205ENST00000393551 C6orf50Q9HD87 102 aa20.76■□□□□ 0.91
PDLIM7-205ENST00000393551 ZBTB42B2RXF5 422 aa20.75■□□□□ 0.91
PDLIM7-205ENST00000393551 H3BNC9 293 aa20.75■□□□□ 0.91
PDLIM7-205ENST00000393551 IFNAR1P17181 557 aa20.75■□□□□ 0.91
PDLIM7-205ENST00000393551 CD52P31358 61 aa20.75■□□□□ 0.91
PDLIM7-205ENST00000393551 RUFY3Q7L099 469 aa20.75■□□□□ 0.91
PDLIM7-205ENST00000393551 TMEM192Q8IY95 271 aa20.75■□□□□ 0.91
PDLIM7-205ENST00000393551 LENG9Q96B70 501 aa20.75■□□□□ 0.91
PDLIM7-205ENST00000393551 RNF26Q9BY78 433 aaPredicted RBP20.75■□□□□ 0.91
PDLIM7-205ENST00000393551 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 SMIM35A0A1B0GVV1 85 aa20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 PSMA5P28066 241 aa20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 SLC26A2P50443 739 aa20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 IER5Q5VY09 327 aa20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 IL27Q8NEV9 243 aa20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 ATP8B4Q8TF62 1192 aa20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 ZNF689Q96CS4 500 aaPredicted RBP20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 MRPL38Q96DV4 380 aaKnown RBP20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 IL17RAQ96F46 866 aa20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 SAMD11Q96NU1 681 aa20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 SLC26A6Q9BXS9 759 aa20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 VPS54Q9P1Q0 977 aa20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 TRPV2Q9Y5S1 764 aa20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 SQORQ9Y6N5 450 aa20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 C5orf42Q9H799 3197 aa20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 IGSF9BQ9UPX0 1349 aa20.74■□□□□ 0.91
PDLIM7-205ENST00000393551 KLRC1P26715 233 aa20.73■□□□□ 0.91
PDLIM7-205ENST00000393551 CIITAP33076 1130 aa20.73■□□□□ 0.91
PDLIM7-205ENST00000393551 SWSAP1Q6NVH7 229 aa20.73■□□□□ 0.91
PDLIM7-205ENST00000393551 CCDC12Q8WUD4 166 aaPredicted RBP20.73■□□□□ 0.91
PDLIM7-205ENST00000393551 LARP6Q9BRS8 491 aaKnown RBP20.73■□□□□ 0.91
PDLIM7-205ENST00000393551 ZNF577Q9BSK1 485 aa20.73■□□□□ 0.91
PDLIM7-205ENST00000393551 CELF4Q9BZC1 486 aaKnown RBP20.73■□□□□ 0.91
PDLIM7-205ENST00000393551 CDHR5Q9HBB8 845 aa20.73■□□□□ 0.91
PDLIM7-205ENST00000393551 ZNF302Q9NR11 478 aa20.73■□□□□ 0.91
PDLIM7-205ENST00000393551 PADI3Q9ULW8 664 aa20.73■□□□□ 0.91
PDLIM7-205ENST00000393551 KDM3AQ9Y4C1 1321 aa20.73■□□□□ 0.91
PDLIM7-205ENST00000393551 KIAA1671Q9BY89 1806 aa20.72■□□□□ 0.91
PDLIM7-205ENST00000393551 BACH1O14867 736 aa20.72■□□□□ 0.91
PDLIM7-205ENST00000393551 EPB41L2O43491 1005 aaKnown RBP20.72■□□□□ 0.91
PDLIM7-205ENST00000393551 HBP1O60381 514 aa20.72■□□□□ 0.91
PDLIM7-205ENST00000393551 RPLP2P05387 115 aaKnown RBP20.72■□□□□ 0.91
PDLIM7-205ENST00000393551 GNA11P29992 359 aa20.72■□□□□ 0.91
PDLIM7-205ENST00000393551 GPM6BQ13491 265 aa20.72■□□□□ 0.91
PDLIM7-205ENST00000393551 PRR16Q569H4 304 aa20.72■□□□□ 0.91
PDLIM7-205ENST00000393551 MCTP2Q6DN12 878 aa20.72■□□□□ 0.91
PDLIM7-205ENST00000393551 KIAA0319LQ8IZA0 1049 aa20.72■□□□□ 0.91
PDLIM7-205ENST00000393551 TNPO1Q92973 898 aaKnown RBP20.72■□□□□ 0.91
PDLIM7-205ENST00000393551 TMX1Q9H3N1 280 aa20.72■□□□□ 0.91
PDLIM7-205ENST00000393551 MAFBQ9Y5Q3 323 aaPredicted RBP20.72■□□□□ 0.91
PDLIM7-205ENST00000393551 DGKIO75912 1065 aa20.71■□□□□ 0.91
PDLIM7-205ENST00000393551 SETQ01105 290 aaPredicted RBP20.71■□□□□ 0.91
PDLIM7-205ENST00000393551 FAM160B1Q5W0V3 765 aa20.71■□□□□ 0.91
PDLIM7-205ENST00000393551 MIS18BP1Q6P0N0 1132 aa20.71■□□□□ 0.91
PDLIM7-205ENST00000393551 PDXDC2PQ6P474 469 aa20.71■□□□□ 0.91
PDLIM7-205ENST00000393551 NME8Q8N427 588 aa20.71■□□□□ 0.91
PDLIM7-205ENST00000393551 FIBCD1Q8N539 461 aa20.71■□□□□ 0.91
PDLIM7-205ENST00000393551 TMEM40Q8WWA1 233 aa20.71■□□□□ 0.91
PDLIM7-205ENST00000393551 CLP1Q92989 425 aaKnown RBP20.71■□□□□ 0.91
PDLIM7-205ENST00000393551 UBE2ZQ9H832 354 aaPredicted RBP20.71■□□□□ 0.91
PDLIM7-205ENST00000393551 TBC1D22BQ9NU19 505 aa20.71■□□□□ 0.91
PDLIM7-205ENST00000393551 ADGRA3Q8IWK6 1321 aa20.71■□□□□ 0.91
PDLIM7-205ENST00000393551 C5orf67F2Z3F1 127 aa20.7■□□□□ 0.9
PDLIM7-205ENST00000393551 KRT76Q01546 638 aa20.7■□□□□ 0.9
PDLIM7-205ENST00000393551 AKAP17AQ02040 695 aaKnown RBP20.7■□□□□ 0.9
PDLIM7-205ENST00000393551 TMEM266Q2M3C6 531 aa20.7■□□□□ 0.9
PDLIM7-205ENST00000393551 ZNF746Q6NUN9 644 aaPredicted RBP20.7■□□□□ 0.9
PDLIM7-205ENST00000393551 UPF3BQ9BZI7 483 aaKnown RBP20.7■□□□□ 0.9
PDLIM7-205ENST00000393551 COL1A2P08123 1366 aa20.7■□□□□ 0.9
PDLIM7-205ENST00000393551 C22orf31O95567 290 aa20.69■□□□□ 0.9
PDLIM7-205ENST00000393551 BMPR1AP36894 532 aa20.69■□□□□ 0.9
PDLIM7-205ENST00000393551 NPY5RQ15761 445 aa20.69■□□□□ 0.9
PDLIM7-205ENST00000393551 ZNF484Q5JVG2 852 aa20.69■□□□□ 0.9
PDLIM7-205ENST00000393551 CCDC148Q8NFR7 591 aa20.69■□□□□ 0.9
PDLIM7-205ENST00000393551 GJA10Q969M2 543 aa20.69■□□□□ 0.9
PDLIM7-205ENST00000393551 TM6SF1Q9BZW5 370 aa20.69■□□□□ 0.9
PDLIM7-205ENST00000393551 SH3GLB2Q9NR46 395 aa20.69■□□□□ 0.9
PDLIM7-205ENST00000393551 CYP46A1Q9Y6A2 500 aa20.69■□□□□ 0.9
PDLIM7-205ENST00000393551 M0QZ92 97 aa20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 M0R2N6 131 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms