RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 SYT1P21579 422 aa21.36■■□□□ 1.01
PDLIM7-204ENST00000393546 THPOP40225 353 aa21.36■■□□□ 1.01
PDLIM7-204ENST00000393546 TRIM71Q2Q1W2 868 aaKnown RBP21.36■■□□□ 1.01
PDLIM7-204ENST00000393546 MARCH8Q5T0T0 291 aa21.36■■□□□ 1.01
PDLIM7-204ENST00000393546 TRMT1LQ7Z2T5 733 aaKnown RBP21.36■■□□□ 1.01
PDLIM7-204ENST00000393546 SCLYQ96I15 445 aa21.36■■□□□ 1.01
PDLIM7-204ENST00000393546 COL1A2P08123 1366 aa21.36■■□□□ 1.01
PDLIM7-204ENST00000393546 WDR81Q562E7 1941 aa21.35■■□□□ 1.01
PDLIM7-204ENST00000393546 MBLAC1A4D2B0 266 aaPredicted RBP21.35■■□□□ 1.01
PDLIM7-204ENST00000393546 ZNF862O60290 1169 aa21.35■■□□□ 1.01
PDLIM7-204ENST00000393546 OR52Z1P0C646 297 aa21.35■■□□□ 1.01
PDLIM7-204ENST00000393546 RFC2P35250 354 aa21.35■■□□□ 1.01
PDLIM7-204ENST00000393546 PSMC5P62195 406 aa21.35■■□□□ 1.01
PDLIM7-204ENST00000393546 NBR1Q14596 966 aa21.35■■□□□ 1.01
PDLIM7-204ENST00000393546 TAF2Q6P1X5 1199 aa21.35■■□□□ 1.01
PDLIM7-204ENST00000393546 BRAPQ7Z569 592 aa21.35■■□□□ 1.01
PDLIM7-204ENST00000393546 WNT8BQ93098 351 aa21.35■■□□□ 1.01
PDLIM7-204ENST00000393546 IL23AQ9NPF7 189 aa21.35■■□□□ 1.01
PDLIM7-204ENST00000393546 CEP131Q9UPN4 1083 aa21.35■■□□□ 1.01
PDLIM7-204ENST00000393546 PCDHB6Q9Y5E3 794 aa21.35■■□□□ 1.01
PDLIM7-204ENST00000393546 CAND2O75155 1236 aa21.34■■□□□ 1.01
PDLIM7-204ENST00000393546 PARNO95453 639 aaKnown RBP21.34■■□□□ 1.01
PDLIM7-204ENST00000393546 OATP04181 439 aa21.34■■□□□ 1.01
PDLIM7-204ENST00000393546 P4HBP07237 508 aaKnown RBP21.34■■□□□ 1.01
PDLIM7-204ENST00000393546 QARSP47897 775 aaKnown RBP21.34■■□□□ 1.01
PDLIM7-204ENST00000393546 EPHB4P54760 987 aa21.34■■□□□ 1.01
PDLIM7-204ENST00000393546 PRKCEQ02156 737 aa21.34■■□□□ 1.01
PDLIM7-204ENST00000393546 SPIRE1Q08AE8 756 aa21.34■■□□□ 1.01
PDLIM7-204ENST00000393546 UGCGQ16739 394 aa21.34■■□□□ 1.01
PDLIM7-204ENST00000393546 XKR3Q5GH77 459 aa21.34■■□□□ 1.01
PDLIM7-204ENST00000393546 LRRC8DQ7L1W4 858 aa21.34■■□□□ 1.01
PDLIM7-204ENST00000393546 RSPH3Q86UC2 560 aa21.34■■□□□ 1.01
PDLIM7-204ENST00000393546 TDHQ8IZJ6 230 aa21.34■■□□□ 1.01
PDLIM7-204ENST00000393546 BANK1Q8NDB2 785 aa21.34■■□□□ 1.01
PDLIM7-204ENST00000393546 TRAPPC12Q8WVT3 735 aa21.34■■□□□ 1.01
PDLIM7-204ENST00000393546 RPLP2P05387 115 aaKnown RBP21.33■■□□□ 1.01
PDLIM7-204ENST00000393546 ACRP10323 421 aa21.33■■□□□ 1.01
PDLIM7-204ENST00000393546 KLRC1P26715 233 aa21.33■■□□□ 1.01
PDLIM7-204ENST00000393546 PTGDRQ13258 359 aa21.33■■□□□ 1.01
PDLIM7-204ENST00000393546 ZNF618Q5T7W0 954 aa21.33■■□□□ 1.01
PDLIM7-204ENST00000393546 MTHFD1LQ6UB35 978 aa21.33■■□□□ 1.01
PDLIM7-204ENST00000393546 C4orf32Q8N8J7 132 aa21.33■■□□□ 1.01
PDLIM7-204ENST00000393546 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.33■■□□□ 1.01
PDLIM7-204ENST00000393546 PCDHA2Q9Y5H9 948 aa21.33■■□□□ 1.01
PDLIM7-204ENST00000393546 DDX11L8A8MPP1 907 aa21.32■■□□□ 1
PDLIM7-204ENST00000393546 RSPH10B2B2RC85 870 aa21.32■■□□□ 1
PDLIM7-204ENST00000393546 LAD1O00515 517 aa21.32■■□□□ 1
PDLIM7-204ENST00000393546 RSPH10BP0C881 870 aa21.32■■□□□ 1
PDLIM7-204ENST00000393546 TECP42680 631 aa21.32■■□□□ 1
PDLIM7-204ENST00000393546 SHHQ15465 462 aa21.32■■□□□ 1
PDLIM7-204ENST00000393546 TMEM266Q2M3C6 531 aa21.32■■□□□ 1
PDLIM7-204ENST00000393546 PSRC1Q6PGN9 363 aaPredicted RBP21.32■■□□□ 1
PDLIM7-204ENST00000393546 RUFY4Q6ZNE9 571 aa21.32■■□□□ 1
PDLIM7-204ENST00000393546 C16orf59Q7L2K0 433 aa21.32■■□□□ 1
PDLIM7-204ENST00000393546 DEFB128Q7Z7B8 93 aa21.32■■□□□ 1
PDLIM7-204ENST00000393546 RPAINQ86UA6 219 aa21.32■■□□□ 1
PDLIM7-204ENST00000393546 FERMT3Q86UX7 667 aa21.32■■□□□ 1
PDLIM7-204ENST00000393546 DYDC2Q96IM9 177 aa21.32■■□□□ 1
PDLIM7-204ENST00000393546 EIF2AK1Q9BQI3 630 aaKnown RBP21.32■■□□□ 1
PDLIM7-204ENST00000393546 SMIM35A0A1B0GVV1 85 aa21.31■■□□□ 1
PDLIM7-204ENST00000393546 ZBTB42B2RXF5 422 aa21.31■■□□□ 1
PDLIM7-204ENST00000393546 MAGEB2O15479 319 aa21.31■■□□□ 1
PDLIM7-204ENST00000393546 STX6O43752 255 aa21.31■■□□□ 1
PDLIM7-204ENST00000393546 FGBP02675 491 aa21.31■■□□□ 1
PDLIM7-204ENST00000393546 PFKMP08237 780 aa21.31■■□□□ 1
PDLIM7-204ENST00000393546 PDIA4P13667 645 aaKnown RBP21.31■■□□□ 1
PDLIM7-204ENST00000393546 HABP4Q5JVS0 413 aaKnown RBP21.31■■□□□ 1
PDLIM7-204ENST00000393546 TMEM240Q5SV17 173 aa21.31■■□□□ 1
PDLIM7-204ENST00000393546 ZNF365Q70YC5 407 aa21.31■■□□□ 1
PDLIM7-204ENST00000393546 SPRYD3Q8NCJ5 442 aa21.31■■□□□ 1
PDLIM7-204ENST00000393546 DNAJB3Q8WWF6 145 aa21.31■■□□□ 1
PDLIM7-204ENST00000393546 ZBTB10Q96DT7 871 aa21.31■■□□□ 1
PDLIM7-204ENST00000393546 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.31■■□□□ 19e-10■■■□□ 15.9
PDLIM7-204ENST00000393546 NIFKQ9BYG3 293 aaKnown RBP21.31■■□□□ 1
PDLIM7-204ENST00000393546 FTOQ9C0B1 505 aaKnown RBP eCLIP21.31■■□□□ 1
PDLIM7-204ENST00000393546 RGL1Q9NZL6 768 aa21.31■■□□□ 1
PDLIM7-204ENST00000393546 SLITRK3O94933 977 aa21.3■■□□□ 1
PDLIM7-204ENST00000393546 C9orf50Q5SZB4 431 aa21.3■■□□□ 1
PDLIM7-204ENST00000393546 TRAF7Q6Q0C0 670 aa21.3■■□□□ 1
PDLIM7-204ENST00000393546 TPH2Q8IWU9 490 aa21.3■■□□□ 1
PDLIM7-204ENST00000393546 C4orf19Q8IY42 314 aa21.3■■□□□ 1
PDLIM7-204ENST00000393546 NME8Q8N427 588 aa21.3■■□□□ 1
PDLIM7-204ENST00000393546 NEK9Q8TD19 979 aa21.3■■□□□ 1
PDLIM7-204ENST00000393546 LXNQ9BS40 222 aa21.3■■□□□ 1
PDLIM7-204ENST00000393546 FAM49AQ9H0Q0 323 aaPredicted RBP21.3■■□□□ 1
PDLIM7-204ENST00000393546 ZSWIM4Q9H7M6 989 aa21.3■■□□□ 1
PDLIM7-204ENST00000393546 SEPT9Q9UHD8 586 aaPredicted RBP21.3■■□□□ 1
PDLIM7-204ENST00000393546 MTMR6Q9Y217 621 aa21.3■■□□□ 1
PDLIM7-204ENST00000393546 STBD1O95210 358 aa21.29■■□□□ 1
PDLIM7-204ENST00000393546 CTSHP09668 335 aa21.29■■□□□ 1
PDLIM7-204ENST00000393546 FXR2P51116 673 aaKnown RBP eCLIP21.29■■□□□ 1
PDLIM7-204ENST00000393546 CYP4A11Q02928 519 aa21.29■■□□□ 1
PDLIM7-204ENST00000393546 CTTNQ14247 550 aaKnown RBP21.29■■□□□ 1
PDLIM7-204ENST00000393546 FAM26DQ5JW98 314 aa21.29■■□□□ 1
PDLIM7-204ENST00000393546 OTUD6AQ7L8S5 288 aa21.29■■□□□ 1
PDLIM7-204ENST00000393546 ERMNQ8TAM6 284 aa21.29■■□□□ 1
PDLIM7-204ENST00000393546 HSD17B14Q9BPX1 270 aa21.29■■□□□ 1
PDLIM7-204ENST00000393546 RAB34Q9BZG1 259 aa21.29■■□□□ 1
PDLIM7-204ENST00000393546 ZSCAN16Q9H4T2 348 aaPredicted RBP21.29■■□□□ 1
PDLIM7-204ENST00000393546 SCN5AQ14524 2016 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms