RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 KCNH4Q9UQ05 1017 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 IQCA1LA6NCM1 817 aa16.56■□□□□ 0.24
MKS1-202ENST00000393119 SOWAHDA6NJG2 315 aa16.56■□□□□ 0.24
MKS1-202ENST00000393119 CLIC2O15247 247 aa16.56■□□□□ 0.24
MKS1-202ENST00000393119 GCNT3O95395 438 aa16.56■□□□□ 0.24
MKS1-202ENST00000393119 KCNA2P16389 499 aa16.56■□□□□ 0.24
MKS1-202ENST00000393119 APBA1Q02410 837 aa16.56■□□□□ 0.24
MKS1-202ENST00000393119 PPIL2Q13356 520 aa16.56■□□□□ 0.24
MKS1-202ENST00000393119 COBLL1Q53SF7 1204 aa16.56■□□□□ 0.24
MKS1-202ENST00000393119 TOGARAM2Q6ZUX3 1019 aa16.56■□□□□ 0.24
MKS1-202ENST00000393119 INPP4AQ96PE3 977 aaPredicted RBP16.56■□□□□ 0.24
MKS1-202ENST00000393119 NACC1Q96RE7 527 aa16.56■□□□□ 0.24
MKS1-202ENST00000393119 NOC4LQ9BVI4 516 aaKnown RBP16.56■□□□□ 0.24
MKS1-202ENST00000393119 AGTPBP1Q9UPW5 1226 aa16.56■□□□□ 0.24
MKS1-202ENST00000393119 CXCL11O14625 94 aa16.56■□□□□ 0.24
MKS1-202ENST00000393119 P4HBP07237 508 aaKnown RBP16.56■□□□□ 0.24
MKS1-202ENST00000393119 NIPA1Q7RTP0 329 aa16.56■□□□□ 0.24
MKS1-202ENST00000393119 PDCL2Q8N4E4 241 aa16.56■□□□□ 0.24
MKS1-202ENST00000393119 PROCA1Q8NCQ7 364 aaPredicted RBP16.56■□□□□ 0.24
MKS1-202ENST00000393119 FIZ1Q96SL8 496 aa16.56■□□□□ 0.24
MKS1-202ENST00000393119 LGALS16A8MUM7 142 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 RIOK3O14730 519 aaKnown RBP16.55■□□□□ 0.24
MKS1-202ENST00000393119 BACH1O14867 736 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 EPHB6O15197 1021 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 USO1O60763 962 aaKnown RBP16.55■□□□□ 0.24
MKS1-202ENST00000393119 EEF1GP26641 437 aaKnown RBP16.55■□□□□ 0.24
MKS1-202ENST00000393119 PADI6Q6TGC4 694 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 RIOX2Q8IUF8 465 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 TEX2Q8IWB9 1127 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 CCAR2Q8N163 923 aaKnown RBP16.55■□□□□ 0.24
MKS1-202ENST00000393119 PORCNQ9H237 461 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 NMRK2Q9NPI5 230 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 ARHGEF35A5YM69 484 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 TISP43B9A030 160 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 AKR1B15C9JRZ8 316 aaPredicted RBP16.55■□□□□ 0.24
MKS1-202ENST00000393119 ZNF862O60290 1169 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 HIP1RO75146 1068 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 TBCAO75347 108 aaKnown RBP16.55■□□□□ 0.24
MKS1-202ENST00000393119 SPAG1Q07617 926 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 MAPK7Q13164 816 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 SYCP1Q15431 976 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 CYFIP1Q7L576 1253 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 NLRX1Q86UT6 975 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 BAG1Q99933 345 aaPredicted RBP16.55■□□□□ 0.24
MKS1-202ENST00000393119 AGPAT5Q9NUQ2 364 aa16.55■□□□□ 0.24
MKS1-202ENST00000393119 TTC26A0AVF1 554 aa16.54■□□□□ 0.24
MKS1-202ENST00000393119 FAM13AO94988 1023 aa16.54■□□□□ 0.24
MKS1-202ENST00000393119 YWHABP31946 246 aaKnown RBP16.54■□□□□ 0.24
MKS1-202ENST00000393119 QARSP47897 775 aaKnown RBP16.54■□□□□ 0.24
MKS1-202ENST00000393119 TBC1D8BQ0IIM8 1120 aa16.54■□□□□ 0.24
MKS1-202ENST00000393119 SWSAP1Q6NVH7 229 aa16.54■□□□□ 0.24
MKS1-202ENST00000393119 EPM2AIP1Q7L775 607 aaPredicted RBP16.54■□□□□ 0.24
MKS1-202ENST00000393119 PNMA8AQ86V59 439 aaPredicted RBP16.54■□□□□ 0.24
MKS1-202ENST00000393119 PPFIBP1Q86W92 1011 aa16.54■□□□□ 0.24
MKS1-202ENST00000393119 ANKRD20A12PQ8NF67 263 aa16.54■□□□□ 0.24
MKS1-202ENST00000393119 SMCR8Q8TEV9 937 aaPredicted RBP16.54■□□□□ 0.24
MKS1-202ENST00000393119 ZSWIM4Q9H7M6 989 aa16.54■□□□□ 0.24
MKS1-202ENST00000393119 EFCC1Q9HA90 598 aa16.54■□□□□ 0.24
MKS1-202ENST00000393119 TBC1D22BQ9NU19 505 aa16.54■□□□□ 0.24
MKS1-202ENST00000393119 GABBR1Q9UBS5 961 aa16.54■□□□□ 0.24
MKS1-202ENST00000393119 MYPNQ86TC9 1320 aa16.54■□□□□ 0.24
MKS1-202ENST00000393119 CASP4P49662 377 aa16.53■□□□□ 0.24
MKS1-202ENST00000393119 RARRES1P49788 294 aa16.53■□□□□ 0.24
MKS1-202ENST00000393119 ALDH5A1P51649 535 aaPredicted RBP16.53■□□□□ 0.24
MKS1-202ENST00000393119 ANO5Q75V66 913 aa16.53■□□□□ 0.24
MKS1-202ENST00000393119 BRCA2P51587 3418 aa16.53■□□□□ 0.24
MKS1-202ENST00000393119 LCTP09848 1927 aa16.53■□□□□ 0.24
MKS1-202ENST00000393119 DOCK5Q9H7D0 1870 aa16.53■□□□□ 0.24
MKS1-202ENST00000393119 MFAP3LO75121 409 aa16.53■□□□□ 0.24
MKS1-202ENST00000393119 ADAM9Q13443 819 aa16.53■□□□□ 0.24
MKS1-202ENST00000393119 RAD9BQ6WBX8 426 aa16.53■□□□□ 0.24
MKS1-202ENST00000393119 CCDC60Q8IWA6 550 aaPredicted RBP16.53■□□□□ 0.24
MKS1-202ENST00000393119 CHST13Q8NET6 341 aa16.53■□□□□ 0.24
MKS1-202ENST00000393119 ZNF592Q92610 1267 aa16.53■□□□□ 0.24
MKS1-202ENST00000393119 POTEB2H3BUK9 544 aa16.52■□□□□ 0.24
MKS1-202ENST00000393119 SLC26A4O43511 780 aa16.52■□□□□ 0.24
MKS1-202ENST00000393119 LRRC63Q05C16 580 aa16.52■□□□□ 0.24
MKS1-202ENST00000393119 ODR4Q5SWX8 454 aa16.52■□□□□ 0.24
MKS1-202ENST00000393119 PPP1R13BQ96KQ4 1090 aa16.52■□□□□ 0.24
MKS1-202ENST00000393119 FGD4Q96M96 766 aa16.52■□□□□ 0.24
MKS1-202ENST00000393119 TGFB1I1O43294 461 aa16.52■□□□□ 0.23
MKS1-202ENST00000393119 CELF2O95319 508 aaKnown RBP16.52■□□□□ 0.23
MKS1-202ENST00000393119 GPRASP2Q96D09 838 aa16.52■□□□□ 0.23
MKS1-202ENST00000393119 CHP1Q99653 195 aa16.52■□□□□ 0.23
MKS1-202ENST00000393119 CRACR2AQ9BSW2 395 aa16.52■□□□□ 0.23
MKS1-202ENST00000393119 KIFC3Q9BVG8 833 aa16.52■□□□□ 0.23
MKS1-202ENST00000393119 PARVGQ9HBI0 331 aa16.52■□□□□ 0.23
MKS1-202ENST00000393119 TCEAL9Q9UHQ7 104 aa16.52■□□□□ 0.23
MKS1-202ENST00000393119 COL4A3BPQ9Y5P4 624 aa16.52■□□□□ 0.23
MKS1-202ENST00000393119 ZMYM2Q9UBW7 1377 aa16.52■□□□□ 0.23
MKS1-202ENST00000393119 WDR64B1ANS9 1081 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 SPATA31C2B4DYI2 1134 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 NR2F2P24468 414 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 ACTR2P61160 394 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 ERVK-24P63145 666 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 FKBP3Q00688 224 aaKnown RBP16.51■□□□□ 0.23
MKS1-202ENST00000393119 LY6KQ17RY6 165 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 KNOP1Q1ED39 458 aaKnown RBP16.51■□□□□ 0.23
MKS1-202ENST00000393119 VWA3BQ502W6 1294 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 SAMD3Q8N6K7 520 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms