RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 CACNA2D3Q8IZS8 1091 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 ACTRT1Q8TDG2 376 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 PBKQ96KB5 322 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 CEP63Q96MT8 703 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 COL22A1Q8NFW1 1626 aaPredicted RBP15.25■□□□□ 0.03
CCDC57-203ENST00000392343 USP17L15C9J2P7 530 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 USP17L13C9JLJ4 530 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 USP17L11C9JVI0 530 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 USP17L18D6R9N7 530 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 USP17L22D6RA61 530 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 USP17L17D6RBQ6 530 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 USP17L19D6RCP7 530 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 USP17L20D6RJB6 530 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 TULP1O00294 542 aaPredicted RBP15.25■□□□□ 0.03
CCDC57-203ENST00000392343 CLIC2O15247 247 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 CAND2O75155 1236 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 FGGP02679 453 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 PON1P27169 355 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 PSMC6P62333 389 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 USP17L24Q0WX57 530 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 USP17L6PQ6QN14 398 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 CLEC4GQ6UXB4 293 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 C16orf86Q6ZW13 317 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 PAXIP1Q6ZW49 1069 aaPredicted RBP15.25■□□□□ 0.03
CCDC57-203ENST00000392343 PARP9Q8IXQ6 854 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 KIRREL3Q8IZU9 778 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 LRRC27Q9C0I9 530 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 RIOX1Q9H6W3 641 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 ABCA3Q99758 1704 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 ZNF335Q9H4Z2 1342 aaPredicted RBP15.24■□□□□ 0.03
CCDC57-203ENST00000392343 GFPT2O94808 682 aa15.24■□□□□ 0.03
CCDC57-203ENST00000392343 CYP11B2P19099 503 aa15.24■□□□□ 0.03
CCDC57-203ENST00000392343 SCTRP47872 440 aa15.24■□□□□ 0.03
CCDC57-203ENST00000392343 CASP4P49662 377 aa15.24■□□□□ 0.03
CCDC57-203ENST00000392343 ZNF211Q13398 564 aaPredicted RBP15.24■□□□□ 0.03
CCDC57-203ENST00000392343 EXOC3L4Q17RC7 722 aa15.24■□□□□ 0.03
CCDC57-203ENST00000392343 UBAP2Q5T6F2 1119 aaKnown RBP15.24■□□□□ 0.03
CCDC57-203ENST00000392343 GLG1Q92896 1179 aa15.24■□□□□ 0.03
CCDC57-203ENST00000392343 SETDB2Q96T68 719 aa15.24■□□□□ 0.03
CCDC57-203ENST00000392343 RTFDC1Q9BY42 306 aaPredicted RBP15.24■□□□□ 0.03
CCDC57-203ENST00000392343 FRMD3A2A2Y4 597 aa15.24■□□□□ 0.03
CCDC57-203ENST00000392343 ARSHQ5FYA8 562 aa15.24■□□□□ 0.03
CCDC57-203ENST00000392343 WDR66Q8TBY9 1149 aa15.24■□□□□ 0.03
CCDC57-203ENST00000392343 SELENOSQ9BQE4 189 aa15.24■□□□□ 0.03
CCDC57-203ENST00000392343 ARMCX3Q9UH62 379 aaPredicted RBP15.24■□□□□ 0.03
CCDC57-203ENST00000392343 TPX2Q9ULW0 747 aaKnown RBP15.24■□□□□ 0.03
CCDC57-203ENST00000392343 ROBO3Q96MS0 1386 aa15.24■□□□□ 0.03
CCDC57-203ENST00000392343 MED24O75448 989 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 KCNA1Q09470 495 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 PABPC4Q13310 644 aaKnown RBP eCLIP15.23■□□□□ 0.03
CCDC57-203ENST00000392343 BIRC3Q13489 604 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 SNCBQ16143 134 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 C1orf131Q8NDD1 294 aaKnown RBP15.23■□□□□ 0.03
CCDC57-203ENST00000392343 F8VZ95 297 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 CTNND1O60716 968 aaKnown RBP15.23■□□□□ 0.03
CCDC57-203ENST00000392343 GNA14O95837 355 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 ZBTB48P10074 688 aaPredicted RBP15.23■□□□□ 0.03
CCDC57-203ENST00000392343 RFC4P35249 363 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 DPY19L2P1Q6NXN4 242 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 AADACL2Q6P093 401 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 KCTD1Q719H9 257 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 ADGRF4Q8IZF3 695 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 N4BP2L2Q92802 583 aaPredicted RBP15.23■□□□□ 0.03
CCDC57-203ENST00000392343 HVCN1Q96D96 273 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 TBC1D31Q96DN5 1066 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 PSMD1Q99460 953 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 ZNF287Q9HBT7 754 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 UTP11Q9Y3A2 253 aaKnown RBP15.23■□□□□ 0.03
CCDC57-203ENST00000392343 RTCBQ9Y3I0 505 aaKnown RBP15.23■□□□□ 0.03
CCDC57-203ENST00000392343 PCDHB13Q9Y5F0 798 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 SRCAPQ6ZRS2 3230 aa15.23■□□□□ 0.03
CCDC57-203ENST00000392343 KDM4FA0A1W2PPD8 638 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 SFI1A8K8P3 1242 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 F8W031 263 aaPredicted RBP15.22■□□□□ 0.03
CCDC57-203ENST00000392343 DDX3XO00571 662 aaKnown RBP eCLIP15.22■□□□□ 0.03
CCDC57-203ENST00000392343 AKAP3O75969 853 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 H2AFZP0C0S5 128 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 GKAP1Q5VSY0 366 aaPredicted RBP15.22■□□□□ 0.03
CCDC57-203ENST00000392343 H2AFVQ71UI9 128 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 TATDN2Q93075 761 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 FAM212AQ96EL1 285 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 JMJD4Q9H9V9 463 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 GGT7Q9UJ14 662 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 ODF2LQ9ULJ1 636 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 XIRP1Q702N8 1843 aaKnown RBP15.22■□□□□ 0.03
CCDC57-203ENST00000392343 ESYT2A0FGR8 921 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 RSPH10B2B2RC85 870 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 AFPP02771 609 aaKnown RBP15.22■□□□□ 0.03
CCDC57-203ENST00000392343 RPSAP08865 295 aaKnown RBP15.22■□□□□ 0.03
CCDC57-203ENST00000392343 RSPH10BP0C881 870 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 SCP2P22307 547 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 GALCP54803 685 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 NT5DC3Q86UY8 548 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 CCDC26Q8TAB7 109 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 MTFR1LQ9H019 292 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 ERVK-5Q9HDB9 667 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 PPP1R9AQ9ULJ8 1098 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 SPDYE3A6NKU9 549 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 USP17L10C9JJH3 530 aa15.22■□□□□ 0.03
CCDC57-203ENST00000392343 FLOT1O75955 427 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms