RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 DHTKD1Q96HY7 919 aaPredicted RBP21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 RPGRIP1Q96KN7 1286 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 TSPYL1Q9H0U9 437 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 CCL15-CCL14A0A0B4J2E2 113 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 POTEB3A0JP26 581 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 PSMA7O14818 248 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 TBX3O15119 743 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 ITGB5P18084 799 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 MCM3P25205 808 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 HERVK_113P62684 666 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 KRT83P78385 493 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 IRX5P78411 483 aaPredicted RBP21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 IRX3P78415 501 aaPredicted RBP21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 CCL15Q16663 113 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 TSR1Q2NL82 804 aaKnown RBP21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 TTI2Q6NXR4 508 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 WDR59Q6PJI9 974 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 POTEBQ6S5H4 581 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 RETREG2Q8NC44 543 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 NOA1Q8NC60 698 aaKnown RBP21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 FAM71BQ8TC56 605 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 BRI3BPQ8WY22 251 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 FAM20AQ96MK3 541 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 RMDN3Q96TC7 470 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 PAGR1Q9BTK6 254 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 NUP58Q9BVL2 599 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 WDR11Q9BZH6 1224 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 ACBD3Q9H3P7 528 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 VIPAS39Q9H9C1 493 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 BTBD7Q9P203 1132 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 KIAA1024Q9UPX6 916 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 MAPK8IP1Q9UQF2 711 aa21.94■■□□□ 1.1
CSNK1D-203ENST00000392334 TRIM49BA6NDI0 452 aa21.93■■□□□ 1.1
CSNK1D-203ENST00000392334 MED24O75448 989 aa21.93■■□□□ 1.1
CSNK1D-203ENST00000392334 TFRCP02786 760 aaKnown RBP21.93■■□□□ 1.1
CSNK1D-203ENST00000392334 PMS1P54277 932 aaKnown RBP21.93■■□□□ 1.1
CSNK1D-203ENST00000392334 TTYH3Q9C0H2 523 aa21.93■■□□□ 1.1
CSNK1D-203ENST00000392334 CWC15Q9P013 229 aaKnown RBP21.93■■□□□ 1.1
CSNK1D-203ENST00000392334 ZBTB48P10074 688 aaPredicted RBP21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 GTF2A2P52657 109 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 OAZ1P54368 228 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 MRPS9P82933 396 aaKnown RBP21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 LARP4BQ92615 738 aaKnown RBP21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 ZNF577Q9BSK1 485 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 MED4Q9NPJ6 270 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 MAGEC2Q9UBF1 373 aaPredicted RBP21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 VAV3Q9UKW4 847 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 ABT1Q9ULW3 272 aaKnown RBP21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 GUCA1BQ9UMX6 200 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 RPTORQ8N122 1335 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 E9PMD0 336 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 DDX39AO00148 427 aaKnown RBP21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 EML1O00423 815 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 MEIS1O00470 390 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 RPS6KA5O75582 802 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 ACTN2P35609 894 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 PPP1R2P41236 205 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 CYP4A11Q02928 519 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 LRCH2Q5VUJ6 765 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 ARHGEF16Q5VV41 709 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 RGMBQ6NW40 437 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 SV2BQ7L1I2 683 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 DYMQ7RTS9 669 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 RASAL3Q86YV0 1011 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 TEX2Q8IWB9 1127 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 TRIM47Q96LD4 638 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 MXRA8Q9BRK3 442 aa21.92■■□□□ 1.1
CSNK1D-203ENST00000392334 TARSL2A2RTX5 802 aaKnown RBP21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 POTEFA5A3E0 1075 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 BTBD19C9JJ37 291 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 SSBP05455 408 aaKnown RBP eCLIP21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 CYP2C8P10632 490 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 CETPP11597 493 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 LMAN1P49257 510 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 GYS2P54840 703 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 SLC20A2Q08357 652 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 PGM5Q15124 567 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 TMEM119Q4V9L6 283 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 POTEGQ6S5H5 508 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 CATSPER3Q86XQ3 398 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 CCDC170Q8IYT3 715 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 PTPN18Q99952 460 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 TRIM9Q9C026 710 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 VPS18Q9P253 973 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 TLL2Q9Y6L7 1015 aa21.91■■□□□ 1.1
CSNK1D-203ENST00000392334 CYLC1P35663 651 aaPredicted RBP21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 GHRHRQ02643 423 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 RAD51AP2Q09MP3 1159 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 LBX2Q6XYB7 198 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 RAD54LQ92698 747 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 ACAD9Q9H845 621 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 SUGCTQ9HAC7 445 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 A1CFQ9NQ94 594 aaKnown RBP21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 PXMP2Q9NR77 195 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 EXOC1Q9NV70 894 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 TRIM10Q9UDY6 481 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 PNMA2Q9UL42 364 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 SAR1BQ9Y6B6 198 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 MYPNQ86TC9 1320 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 EIF3CLB5ME19 914 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms