RNA–Protein interactions for RNA: ENST00000392088.6

TUBA4A-202, Transcript of tubulin alpha 4a, humanhuman

TSL 2 BASIC

Gene TUBA4A, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-202ENST00000392088 GJB7Q6PEY0 223 aa21.5■■□□□ 1.03
TUBA4A-202ENST00000392088 CNPY4Q8N129 248 aa21.5■■□□□ 1.03
TUBA4A-202ENST00000392088 CNBD1Q8NA66 436 aa21.5■■□□□ 1.03
TUBA4A-202ENST00000392088 PAGR1Q9BTK6 254 aa21.5■■□□□ 1.03
TUBA4A-202ENST00000392088 ARMCX3Q9UH62 379 aaPredicted RBP21.5■■□□□ 1.03
TUBA4A-202ENST00000392088 GGA1Q9UJY5 639 aa21.5■■□□□ 1.03
TUBA4A-202ENST00000392088 AFPP02771 609 aaKnown RBP21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 GIT2Q14161 759 aa21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 EXOC3L4Q17RC7 722 aa21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 PPP4R3CPQ6ZMV5 832 aa21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 SFR1Q86XK3 245 aa21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 POLLQ9UGP5 575 aa21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 CCNL1Q9UK58 526 aaPredicted RBP21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 NENFQ9UMX5 172 aa21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 KIAA0754O94854 1291 aa21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 ZNF844Q08AG5 666 aa21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 C10orf76Q5T2E6 689 aa21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 CATSPER3Q86XQ3 398 aa21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 P2RX7Q99572 595 aaKnown RBP21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 SIX2Q9NPC8 291 aa21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 TRAF3IP3Q9Y228 551 aa21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 BTAF1O14981 1849 aa21.49■■□□□ 1.03
TUBA4A-202ENST00000392088 TMCO5BA8MYB1 307 aa21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 E7EVH7 732 aa21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 F8W031 263 aaPredicted RBP21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 AKAP3O75969 853 aa21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 ATP2B4P23634 1241 aa21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 CASP4P49662 377 aa21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 PABPC4Q13310 644 aaKnown RBP eCLIP21.48■■□□□ 1.038e-19■■■■■ 47.4
TUBA4A-202ENST00000392088 CUL1Q13616 776 aa21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 DCAF17Q5H9S7 520 aaPredicted RBP21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 LRIG3Q6UXM1 1119 aa21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 FRMD5Q7Z6J6 570 aa21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 PRPF38AQ8NAV1 312 aaKnown RBP21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 PPANQ9NQ55 473 aaKnown RBP21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 PGRMC1O00264 195 aaKnown RBP21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 EPHA7Q15375 998 aa21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 MCTP2Q6DN12 878 aa21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 REEP2Q9BRK0 252 aa21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 LRRC4CQ9HCJ2 640 aa21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 AMACRQ9UHK6 382 aa21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 FBXL5Q9UKA1 691 aa21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 STXBP5LQ9Y2K9 1186 aa21.48■■□□□ 1.03
TUBA4A-202ENST00000392088 PITPNM2Q9BZ72 1349 aa21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 FSBPO95073 299 aa21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 SHMT1P34896 483 aa21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 PRKCIP41743 596 aa21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 SPIRE1Q08AE8 756 aa21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 KNOP1Q1ED39 458 aaKnown RBP21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 SLF2Q8IX21 1173 aa21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 EIF1ADQ8N9N8 165 aaKnown RBP21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 RPGRQ92834 1020 aaKnown RBP21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 ANO3Q9BYT9 981 aa21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 RSPH10B2B2RC85 870 aa21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 GCOM1H8Y6P7 765 aaPredicted RBP21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 DAPK3O43293 454 aa21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 RSPH10BP0C881 870 aa21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 MYZAPP0CAP1 466 aa21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 CTNNA1P35221 906 aaKnown RBP21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 GTF2IP78347 998 aa21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 PRR5LQ6MZQ0 368 aa21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 EPM2AIP1Q7L775 607 aaPredicted RBP21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 SPATS2Q86XZ4 545 aaKnown RBP21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 BZW2Q9Y6E2 419 aaKnown RBP21.47■■□□□ 1.03
TUBA4A-202ENST00000392088 KRIT1O00522 736 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 DDX3XO00571 662 aaKnown RBP eCLIP21.46■■□□□ 1.033e-13■■□□□ 13.5
TUBA4A-202ENST00000392088 FAM107AO95990 144 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 QRICH1Q2TAL8 776 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 FAM182BQ5T319 152 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 TCERG1LQ5VWI1 586 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 PEX26Q7Z412 305 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 SLFN11Q7Z7L1 901 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 CALR3Q96L12 384 aaKnown RBP21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 CELF4Q9BZC1 486 aaKnown RBP21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 SWAP70Q9UH65 585 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 SLC12A6Q9UHW9 1150 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 SERPINB13Q9UIV8 391 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 GOLGA6L10A6NI86 522 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 MPHOSPH10O00566 681 aaKnown RBP21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 SPATA31C1P0DKV0 1188 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 XRCC5P13010 732 aaKnown RBP21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 TMOD1P28289 359 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 JAM2P57087 298 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 KCNA1Q09470 495 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 IFT88Q13099 833 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 IFI16Q16666 785 aaKnown RBP21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 IKZF4Q9H2S9 585 aa21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 CNOT8Q9UFF9 292 aaKnown RBP21.46■■□□□ 1.03
TUBA4A-202ENST00000392088 FAM170AA1A519 330 aa21.45■■□□□ 1.02
TUBA4A-202ENST00000392088 CLIC2O15247 247 aa21.45■■□□□ 1.02
TUBA4A-202ENST00000392088 TTI1O43156 1089 aa21.45■■□□□ 1.02
TUBA4A-202ENST00000392088 GPATCH4Q5T3I0 446 aaKnown RBP21.45■■□□□ 1.02
TUBA4A-202ENST00000392088 RNF187Q5TA31 235 aaPredicted RBP21.45■■□□□ 1.02
TUBA4A-202ENST00000392088 TBC1D16Q8TBP0 767 aa21.45■■□□□ 1.02
TUBA4A-202ENST00000392088 UBLCP1Q8WVY7 318 aaPredicted RBP21.45■■□□□ 1.02
TUBA4A-202ENST00000392088 LRRC45Q96CN5 670 aa21.45■■□□□ 1.02
TUBA4A-202ENST00000392088 MBOAT7Q96N66 472 aa21.45■■□□□ 1.02
TUBA4A-202ENST00000392088 BCCIPQ9P287 314 aaKnown RBP eCLIP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms