RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 FGFR4P22455 802 aa17.33■□□□□ 0.37
SHANK1-204ENST00000391814 CCNE1P24864 410 aa17.33■□□□□ 0.37
SHANK1-204ENST00000391814 ENAHQ8N8S7 591 aaPredicted RBP17.33■□□□□ 0.37
SHANK1-204ENST00000391814 CCNYQ8ND76 341 aa17.33■□□□□ 0.37
SHANK1-204ENST00000391814 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.33■□□□□ 0.37
SHANK1-204ENST00000391814 LRRC1Q9BTT6 524 aa17.33■□□□□ 0.37
SHANK1-204ENST00000391814 ADAMTS1Q9UHI8 967 aa17.33■□□□□ 0.37
SHANK1-204ENST00000391814 ADGRG1Q9Y653 693 aa17.33■□□□□ 0.37
SHANK1-204ENST00000391814 SRGAP2BP0DMP2 458 aa17.33■□□□□ 0.37
SHANK1-204ENST00000391814 BRAFP15056 766 aa17.33■□□□□ 0.37
SHANK1-204ENST00000391814 PRKG1Q13976 671 aa17.33■□□□□ 0.37
SHANK1-204ENST00000391814 IQCB1Q15051 598 aa17.33■□□□□ 0.37
SHANK1-204ENST00000391814 CADPS2Q86UW7 1296 aa17.33■□□□□ 0.37
SHANK1-204ENST00000391814 EXT2Q93063 718 aa17.33■□□□□ 0.37
SHANK1-204ENST00000391814 HSPA9P38646 679 aaKnown RBP17.33■□□□□ 0.36
SHANK1-204ENST00000391814 METTL13Q8N6R0 699 aa17.33■□□□□ 0.36
SHANK1-204ENST00000391814 GFM2Q969S9 779 aaKnown RBP17.33■□□□□ 0.36
SHANK1-204ENST00000391814 STX18Q9P2W9 335 aaKnown RBP17.33■□□□□ 0.36
SHANK1-204ENST00000391814 TESPA1A2RU30 521 aaPredicted RBP17.33■□□□□ 0.36
SHANK1-204ENST00000391814 NPR1P16066 1061 aa17.33■□□□□ 0.36
SHANK1-204ENST00000391814 SPOUT1Q5T280 376 aaKnown RBP17.33■□□□□ 0.36
SHANK1-204ENST00000391814 WDR75Q8IWA0 830 aaKnown RBP17.33■□□□□ 0.36
SHANK1-204ENST00000391814 IP6K1Q92551 441 aa17.33■□□□□ 0.36
SHANK1-204ENST00000391814 ADA2Q9NZK5 511 aa17.33■□□□□ 0.36
SHANK1-204ENST00000391814 GDAQ9Y2T3 454 aa17.33■□□□□ 0.36
SHANK1-204ENST00000391814 ANO9A1A5B4 782 aa17.33■□□□□ 0.36
SHANK1-204ENST00000391814 TRPC1P48995 793 aa17.33■□□□□ 0.36
SHANK1-204ENST00000391814 MTF1Q14872 753 aa17.33■□□□□ 0.36
SHANK1-204ENST00000391814 ZMYM1Q5SVZ6 1142 aa17.33■□□□□ 0.36
SHANK1-204ENST00000391814 NCLNQ969V3 563 aa17.33■□□□□ 0.36
SHANK1-204ENST00000391814 SLC52A2Q9HAB3 445 aa17.33■□□□□ 0.36
SHANK1-204ENST00000391814 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
SHANK1-204ENST00000391814 DAB1O75553 588 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 ENO1P06733 434 aaKnown RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 ZNF211Q13398 564 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 BZW1Q7L1Q6 419 aaKnown RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 CATSPER3Q86XQ3 398 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 RIN2Q8WYP3 895 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 AK8Q96MA6 479 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 CALN1Q9BXU9 219 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 HNRNPCL2B2RXH8 293 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 HNRNPCL1O60812 293 aaKnown RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 PGM1P36871 562 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 GIPC2Q8TF65 315 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 CALR3Q96L12 384 aaKnown RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 RMDN2Q96LZ7 410 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 ZNF277Q9NRM2 450 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 GEMIN8Q9NWZ8 242 aaKnown RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 GFAPP14136 432 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 BPIFB4P59827 614 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 TSPY1Q01534 308 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 RYBPQ8N488 228 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 EDC4Q6P2E9 1401 aaKnown RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 IPO5O00410 1097 aaKnown RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 TMED10P49755 219 aaKnown RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 ARHGEF16Q5VV41 709 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 KIF2BQ8N4N8 673 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 L3MBTL1Q9Y468 752 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 SH2B2O14492 632 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 ALDH18A1P54886 795 aaKnown RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 ZNF710Q8N1W2 664 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 MS4A14Q96JA4 679 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 SPATA17Q96L03 361 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 ZBED4O75132 1171 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 RARS2Q5T160 578 aaKnown RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 NAIF1Q69YI7 327 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-204ENST00000391814 PARP3Q9Y6F1 533 aa17.32■□□□□ 0.36
SHANK1-204ENST00000391814 ARHGEF10O15013 1369 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 MAST1Q9Y2H9 1570 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 ADORA1P30542 326 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 DNAJC24Q6P3W2 148 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 HEMGNQ9BXL5 484 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 DDX47Q9H0S4 455 aaKnown RBP17.31■□□□□ 0.36
SHANK1-204ENST00000391814 GIMAP4Q9NUV9 329 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 NOC2LQ9Y3T9 749 aaKnown RBP17.31■□□□□ 0.36
SHANK1-204ENST00000391814 SEMA3EO15041 775 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 PPP1R37O75864 691 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 CCND1P24385 295 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 SERPINB3P29508 390 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 TRAPPC10P48553 1259 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 CCZ1BP86790 482 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 CCZ1P86791 482 aaPredicted RBP17.31■□□□□ 0.36
SHANK1-204ENST00000391814 ALKBH5Q6P6C2 394 aaKnown RBP17.31■□□□□ 0.36
SHANK1-204ENST00000391814 NLRX1Q86UT6 975 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 RNF217Q8TC41 542 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 E2F6O75461 281 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 SERPINI2O75830 405 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 SERPINB4P48594 390 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 CTSWP56202 376 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 FKBP3Q00688 224 aaKnown RBP17.31■□□□□ 0.36
SHANK1-204ENST00000391814 CCDC15Q0P6D6 951 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 ACAD11Q709F0 780 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 POLD4Q9HCU8 107 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 ABCF3Q9NUQ8 709 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 SUCLA2Q9P2R7 463 aaPredicted RBP17.31■□□□□ 0.36
SHANK1-204ENST00000391814 PFDN6O15212 129 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 TEX33O43247 280 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 TMEM191BP0C7N4 346 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 CEP72Q9P209 647 aa17.31■□□□□ 0.36
SHANK1-204ENST00000391814 DNMT1P26358 1616 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms