RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CFAP54Q96N23 3096 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 ZFHX2Q9C0A1 2572 aaPredicted RBP11.12□□□□□ -0.63
IFT88-203ENST00000389373 MED19A0JLT2 244 aaPredicted RBP11.12□□□□□ -0.63
IFT88-203ENST00000389373 SARSP49591 514 aaKnown RBP11.12□□□□□ -0.63
IFT88-203ENST00000389373 MFAP1P55081 439 aaKnown RBP11.12□□□□□ -0.63
IFT88-203ENST00000389373 TRAF1Q13077 416 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 FAM102BQ5T8I3 360 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 PDE12Q6L8Q7 609 aaKnown RBP11.12□□□□□ -0.63
IFT88-203ENST00000389373 CES5AQ6NT32 575 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 NLRX1Q86UT6 975 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 CRIPAKQ8N1N5 446 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 COLGALT1Q8NBJ5 622 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 SMARCC2Q8TAQ2 1214 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 SEPT1Q8WYJ6 367 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 MTMR8Q96EF0 704 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 TCF25Q9BQ70 676 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 POMKQ9H5K3 350 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 TYW1Q9NV66 732 aaKnown RBP11.12□□□□□ -0.63
IFT88-203ENST00000389373 ERAP1Q9NZ08 941 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 LIMD1Q9UGP4 676 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 PUF60Q9UHX1 559 aaKnown RBP11.12□□□□□ -0.63
IFT88-203ENST00000389373 MAD2L2Q9UI95 211 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 GINS2Q9Y248 185 aa11.12□□□□□ -0.63
IFT88-203ENST00000389373 MYH6P13533 1939 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 TTC3P53804 2025 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 GSTTP1A0A1W2PQM5 241 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 DENND3A2RUS2 1198 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 MBLAC1A4D2B0 266 aaPredicted RBP11.11□□□□□ -0.63
IFT88-203ENST00000389373 RRN3P2A6NIE6 340 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 HIDE1A8MVS5 230 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 FSCN2O14926 492 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 ATP9AO75110 1047 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 WEE2P0C1S8 567 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 INSRRP14616 1297 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 HOXB8P17481 243 aaPredicted RBP11.11□□□□□ -0.63
IFT88-203ENST00000389373 PDE1AP54750 535 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 TPRNQ4KMQ1 711 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 TMEM184AQ6ZMB5 413 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 DGLUCYQ7Z3D6 616 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 TMC7Q7Z402 723 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 GIMAP8Q8ND71 665 aaPredicted RBP11.11□□□□□ -0.63
IFT88-203ENST00000389373 TRAPPC12Q8WVT3 735 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 CUL5Q93034 780 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 SENP7Q9BQF6 1050 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 CELF4Q9BZC1 486 aaKnown RBP11.11□□□□□ -0.63
IFT88-203ENST00000389373 KRT23Q9C075 422 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 SMARCAD1Q9H4L7 1026 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 PCDHB15Q9Y5E8 787 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 SQORQ9Y6N5 450 aa11.11□□□□□ -0.63
IFT88-203ENST00000389373 SALL3Q9BXA9 1300 aa11.1□□□□□ -0.63
IFT88-203ENST00000389373 PNMA6FA0A0J9YX94 578 aa11.1□□□□□ -0.63
IFT88-203ENST00000389373 PALM3A6NDB9 673 aaPredicted RBP11.1□□□□□ -0.63
IFT88-203ENST00000389373 STK25O00506 426 aa11.1□□□□□ -0.63
IFT88-203ENST00000389373 CLCN5P51795 746 aa11.1□□□□□ -0.63
IFT88-203ENST00000389373 KRT76Q01546 638 aa11.1□□□□□ -0.63
IFT88-203ENST00000389373 SLC35G1Q2M3R5 365 aa11.1□□□□□ -0.63
IFT88-203ENST00000389373 USP17L6PQ6QN14 398 aa11.1□□□□□ -0.63
IFT88-203ENST00000389373 KIAA2013Q8IYS2 634 aa11.1□□□□□ -0.63
IFT88-203ENST00000389373 MRPS27Q92552 414 aaKnown RBP11.1□□□□□ -0.63
IFT88-203ENST00000389373 CASP10Q92851 521 aa11.1□□□□□ -0.63
IFT88-203ENST00000389373 RMDN1Q96DB5 314 aa11.1□□□□□ -0.63
IFT88-203ENST00000389373 ADAM2Q99965 735 aa11.1□□□□□ -0.63
IFT88-203ENST00000389373 TMX1Q9H3N1 280 aa11.1□□□□□ -0.63
IFT88-203ENST00000389373 PTPRZ1P23471 2315 aaPredicted RBP11.1□□□□□ -0.63
IFT88-203ENST00000389373 DOCK5Q9H7D0 1870 aa11.1□□□□□ -0.63
IFT88-203ENST00000389373 PLXNA4Q9HCM2 1894 aa11.1□□□□□ -0.63
IFT88-203ENST00000389373 ZDBF2Q9HCK1 2354 aa11.1□□□□□ -0.63
IFT88-203ENST00000389373 KIAA1671Q9BY89 1806 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 PI15O43692 258 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 MGEA5O60502 916 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 KRT37O76014 449 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 RPLP2P05387 115 aaKnown RBP11.09□□□□□ -0.63
IFT88-203ENST00000389373 FGFR1P11362 822 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 LAG3P18627 525 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 SDSP20132 328 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 NT5C2P49902 561 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 KCNC3Q14003 757 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 ANGPT1Q15389 498 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 IMMTQ16891 758 aaKnown RBP11.09□□□□□ -0.63
IFT88-203ENST00000389373 RARS2Q5T160 578 aaKnown RBP11.09□□□□□ -0.63
IFT88-203ENST00000389373 PCNX4Q63HM2 1172 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 C12orf76Q8N812 135 aaPredicted RBP11.09□□□□□ -0.63
IFT88-203ENST00000389373 TDRD5Q8NAT2 981 aaKnown RBP11.09□□□□□ -0.63
IFT88-203ENST00000389373 PPP1R16BQ96T49 567 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 HINFPQ9BQA5 517 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 RIOX1Q9H6W3 641 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 CWH43Q9H720 699 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 ATP6V0A4Q9HBG4 840 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 DBR1Q9UK59 544 aaKnown RBP11.09□□□□□ -0.63
IFT88-203ENST00000389373 KAT6AQ92794 2004 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 IGSF9BQ9UPX0 1349 aa11.09□□□□□ -0.63
IFT88-203ENST00000389373 RPS6KA5O75582 802 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 ARP10275 920 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 KCNA2P16389 499 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 PBX3P40426 434 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 MTHFRP42898 656 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 PLCB3Q01970 1234 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 KRT17Q04695 432 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 PLCB4Q15147 1175 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 KANK3Q6NY19 840 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms