RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 NSUN4Q96CB9 384 aaKnown RBP7.15□□□□□ -1.26
NEDD9-202ENST00000379446 TMEM47Q9BQJ4 181 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 FUCA2Q9BTY2 467 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 EMILIN2Q9BXX0 1053 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 UNC93B1Q9H1C4 597 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 LRRC4Q9HBW1 653 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 GINM1Q9NU53 330 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 ERAP1Q9NZ08 941 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 VPS18Q9P253 973 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 MED1Q15648 1581 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-202ENST00000379446 PEAK1Q9H792 1746 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 DDTLA6NHG4 134 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-202ENST00000379446 CAVIN2O95810 425 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 ST8SIA6P61647 398 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 KRT76Q01546 638 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 MYO1EQ12965 1108 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 PDIA6Q15084 440 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 FAM110CQ1W6H9 321 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 MGAT5BQ3V5L5 792 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 PSRC1Q6PGN9 363 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-202ENST00000379446 ARMCX2Q7L311 632 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 BLIDQ8IZY5 108 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 OR6B3Q8NGW1 331 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 SLC9A2Q9UBY0 812 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 USP18Q9UMW8 372 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 KDM6AO15550 1401 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-202ENST00000379446 ASTN2O75129 1339 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-202ENST00000379446 PXDNLA1KZ92 1463 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 PNMA6FA0A0J9YX94 578 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 USP27XA6NNY8 438 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 PSMA7O14818 248 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 GPR182O15218 404 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 SCG2P13521 617 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 TTC38Q5R3I4 469 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 CABP7Q86V35 215 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 OSBP2Q969R2 916 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 LLPHQ9BRT6 129 aaKnown RBP7.15□□□□□ -1.27
NEDD9-202ENST00000379446 XPO4Q9C0E2 1151 aaKnown RBP7.15□□□□□ -1.27
NEDD9-202ENST00000379446 HAUS2Q9NVX0 235 aa7.15□□□□□ -1.27
NEDD9-202ENST00000379446 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-202ENST00000379446 SPDYE5A6NIY4 337 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 NCAM2O15394 837 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 HUS1O60921 280 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 OAS2P29728 719 aaKnown RBP7.14□□□□□ -1.27
NEDD9-202ENST00000379446 GSDMDP57764 484 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 RNASE9P60153 205 aaKnown RBP7.14□□□□□ -1.27
NEDD9-202ENST00000379446 PRPF4BQ13523 1007 aaKnown RBP7.14□□□□□ -1.27
NEDD9-202ENST00000379446 RAPGEF1Q13905 1077 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 KRT33BQ14525 404 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 ATAT1Q5SQI0 421 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-202ENST00000379446 ZNF467Q7Z7K2 595 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-202ENST00000379446 LRRC8AQ8IWT6 810 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 TXLNBQ8N3L3 684 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 ANKRD36BP1Q96IX9 119 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 AIFM3Q96NN9 605 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 JPH1Q9HDC5 661 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-202ENST00000379446 TUBE1Q9UJT0 475 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 HPS5Q9UPZ3 1129 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 ESYT2A0FGR8 921 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 RRN3P2A6NIE6 340 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 MEIS1O00470 390 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 ZBTB5O15062 677 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 EPB41P11171 864 aaKnown RBP7.14□□□□□ -1.27
NEDD9-202ENST00000379446 MYL4P12829 197 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 KCNA5P22460 613 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 ADD1P35611 737 aaKnown RBP7.14□□□□□ -1.27
NEDD9-202ENST00000379446 UBASH3AP57075 661 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 LACTBP83111 547 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-202ENST00000379446 SETQ01105 290 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-202ENST00000379446 DPCR1Q3MIW9 517 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 ZNF568Q3ZCX4 644 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 FOXR1Q6PIV2 292 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 FBXO22Q8NEZ5 403 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 TAF4BQ92750 862 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 SLC4A9Q96Q91 983 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 CARD6Q9BX69 1037 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 MOV10L1Q9BXT6 1211 aaKnown RBP7.14□□□□□ -1.27
NEDD9-202ENST00000379446 SPTLC3Q9NUV7 552 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 PCDHB13Q9Y5F0 798 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 GON4LQ3T8J9 2241 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 ZNF609O15014 1411 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-202ENST00000379446 PXDNQ92626 1479 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 ASXL3Q9C0F0 2248 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 C3P01024 1663 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 FAM170AA1A519 330 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 MAP3K7O43318 606 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 ZNF202O95125 648 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 NLRP11P59045 1033 aaKnown RBP7.14□□□□□ -1.27
NEDD9-202ENST00000379446 TTC31Q49AM3 519 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-202ENST00000379446 GPBP1Q86WP2 473 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 RNF149Q8NC42 400 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 PRR12Q9ULL5 1215 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 KCPQ6ZWJ8 1503 aa7.14□□□□□ -1.27
NEDD9-202ENST00000379446 CYBBP04839 570 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 CKMP06732 381 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 PLCD1P51178 756 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 CACNB2Q08289 660 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-202ENST00000379446 SEPT7Q16181 437 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms