RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 DDX42Q86XP3 938 aaKnown RBP eCLIP12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 NT5DC4Q86YG4 428 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 B4GALNT2Q8NHY0 566 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 EGFL8Q99944 293 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 DSCC1Q9BVC3 393 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 DIABLOQ9NR28 239 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 SPDYE5A6NIY4 337 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 RALAP11233 206 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 MORF4L2Q15014 288 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 SPDYE7PQ495Y7 208 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 ARHGAP26Q9UNA1 814 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 MT-ND3P03897 115 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 HOXB7P09629 217 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 CHMLP26374 656 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 MESDQ14696 234 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 CABLES1Q8TDN4 633 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 MTIF3Q9H2K0 278 aaKnown RBP12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 SARS2Q9NP81 518 aaKnown RBP12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 MYL3P08590 195 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 HPCAP84074 193 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 TNFAIP2Q03169 654 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 PODNQ7Z5L7 613 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 ERICH1Q86X53 443 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 PYROXD1Q8WU10 500 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 CCDC17Q96LX7 622 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 VPS54Q9P1Q0 977 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 FAF2Q96CS3 445 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 ZMYM6O95789 1325 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 TJP3O95049 919 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 DALRD3Q5D0E6 543 aaKnown RBP12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 BUB1O43683 1085 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 YY1AP1Q9H869 796 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 FAM32AQ9Y421 112 aaKnown RBP12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 SEMA3EO15041 775 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 AFPP02771 609 aaKnown RBP12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 RPN1P04843 607 aaKnown RBP12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 AP1ARQ63HQ0 302 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 TTC39CQ8N584 583 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 FAM47E-STBD1D6RA91 191 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 TAF5LO75529 589 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 RAD51Q06609 339 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 EIF4A2Q14240 407 aaKnown RBP12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 CARSP49589 748 aaKnown RBP12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 NEK2P51955 445 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 ZNF790Q6PG37 636 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 NDE1Q9NXR1 346 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 KRT1P04264 644 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 SEPT2Q15019 361 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 PDCD6IPQ8WUM4 868 aaKnown RBP12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 C5orf58C9J3I9 102 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 CLCN1P35523 988 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 ST13P4Q8IZP2 240 aaPredicted RBP12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 CYP26B1Q9NR63 512 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 KCNJ14Q9UNX9 436 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 PRG3Q9Y2Y8 225 aaPredicted RBP12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 GUCA1CO95843 209 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 KRT14P02533 472 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 CENPUQ71F23 418 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 AATKQ6ZMQ8 1374 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 KCNJ6P48051 423 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 MSTO1Q9BUK6 570 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 ZNF638Q14966 1978 aaKnown RBP12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 SLC10A4Q96EP9 437 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 SPAG7O75391 227 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 GCFC2P16383 781 aaKnown RBP12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 RPS8P62241 208 aaKnown RBP12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 ACCSLQ4AC99 568 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 NOSTRINQ8IVI9 506 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 CALR3Q96L12 384 aaKnown RBP12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 UHRF1BP1Q6BDS2 1440 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 NLGN1Q8N2Q7 840 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 UBE2Q2Q8WVN8 375 aa12.01□□□□□ -0.49
PTCHD1-201ENST00000379361 CFLARO15519 480 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 GCKRQ14397 625 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 MYCBPQ99417 103 aaPredicted RBP12□□□□□ -0.49
PTCHD1-201ENST00000379361 AMNQ9BXJ7 453 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 NCKAP1LP55160 1127 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 LRRC31Q6UY01 552 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 GEMIN8Q9NWZ8 242 aaKnown RBP12□□□□□ -0.49
PTCHD1-201ENST00000379361 MYL1P05976 194 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 MARK3P27448 753 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 TMED2Q15363 201 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 hCG_1642624A0A1W2PR95 340 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 PIK3R2O00459 728 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 PRDM1O75626 825 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 GRAMD1BQ3KR37 738 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 FAM96AQ9H5X1 160 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 DOCK10Q96BY6 2186 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 HOXC9P31274 260 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 EHHADHQ08426 723 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 TMEM161AQ9NX61 479 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 WARS2Q9UGM6 360 aaKnown RBP12□□□□□ -0.49
PTCHD1-201ENST00000379361 EXOC1LA0A1B0GW35 172 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 KLHL8Q9P2G9 620 aaPredicted RBP12□□□□□ -0.49
PTCHD1-201ENST00000379361 ADGRF5Q8IZF2 1346 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 TIMM10P62072 90 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 DMC1Q14565 340 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 CEP170P1Q96L14 293 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 CBX8Q9HC52 389 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms