RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 TTC26A0AVF1 554 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 WNT10BO00744 389 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 RHOBTB3O94955 611 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 PDE6CP51160 858 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 PSMC5P62195 406 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 KCNH2Q12809 1159 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 WHAMMP3Q1A5X7 153 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 CCDC125Q86Z20 511 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 CCDC155Q8N6L0 562 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 CEP63Q96MT8 703 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 PPP1R16BQ96T49 567 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 HYOU1Q9Y4L1 999 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 TCP1P17987 556 aaKnown RBP15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 ALCAMQ13740 583 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 CFAP58Q5T655 872 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 CCDC170Q8IYT3 715 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 C7orf25Q9BPX7 421 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 KCNF1Q9H3M0 494 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 OSTNP61366 133 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 SEMA3FQ13275 785 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 HDXQ7Z353 690 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 ANKS1AQ92625 1134 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 MMS19Q96T76 1030 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 UBE2TQ9NPD8 197 aaPredicted RBP15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 CDC23Q9UJX2 597 aa15.45■□□□□ 0.06
SHROOM1-203ENST00000378679 ZEB2O60315 1214 aa15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 PIK3CAP42336 1068 aa15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 MFAP3P55082 362 aa15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 TFAMQ00059 246 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 PTK2Q05397 1052 aa15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 TYW1Q9NV66 732 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 MTRF1LQ9UGC7 380 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 KIF4AO95239 1232 aa15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 RPS6P62753 249 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 GMCL1Q96IK5 515 aa15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 ABHD10Q9NUJ1 306 aa15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 SEL1LQ9UBV2 794 aa15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 AGTPBP1Q9UPW5 1226 aa15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 SETD1AO15047 1707 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 NMT1P30419 496 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 FXR2P51116 673 aaKnown RBP eCLIP15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 KIF11P52732 1056 aa15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 TTC31Q49AM3 519 aaPredicted RBP15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 ZBTB33Q86T24 672 aa15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 FAM83AQ86UY5 434 aa15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 XXYLT1Q8NBI6 393 aa15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 GIMAP7Q8NHV1 300 aa15.44■□□□□ 0.06
SHROOM1-203ENST00000378679 OPA1O60313 960 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 P4HA1P13674 534 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 NEDD9Q14511 834 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 Q3C1V9 767 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 AKT1S1Q96B36 256 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 AP5M1Q9H0R1 490 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 DENND3A2RUS2 1198 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 SMIM23A6NLE4 172 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 HNRNPH2P55795 449 aaKnown RBP15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 TTC16Q8NEE8 873 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 APOL6Q9BWW8 343 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 ABT1Q9ULW3 272 aaKnown RBP15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 ZNF233A6NK53 670 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 FOXP2O15409 715 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 YARSP54577 528 aaKnown RBP15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 SPDYE2Q495Y8 402 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 AMIGO3Q86WK7 504 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 RPGRIP1Q96KN7 1286 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 FAM198AQ9UFP1 575 aa15.43■□□□□ 0.06
SHROOM1-203ENST00000378679 RPA1P27694 616 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 GCLMP48507 274 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 TERF2Q15554 542 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 SCYL3Q8IZE3 742 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 GIMAP8Q8ND71 665 aaPredicted RBP15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 ATP6V0A4Q9HBG4 840 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 TUFT1Q9NNX1 390 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 ABCC6O95255 1503 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 ATP2A1O14983 1001 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 CA8P35219 290 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 YWHAEP62258 255 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 LACTBP83111 547 aaPredicted RBP15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 POTEAQ6S8J7 498 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 TOGARAM2Q6ZUX3 1019 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 INTS8Q75QN2 995 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 FASTKD5Q7L8L6 764 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 IFT20Q8IY31 132 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 GPR161Q8N6U8 529 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 EFCAB8A8MWE9 144 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 HIP1RO75146 1068 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 ZNF365Q70YC5 407 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 PSMD1Q99460 953 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 REEP2Q9BRK0 252 aa15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 MAK16Q9BXY0 300 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-203ENST00000378679 SERPING1P05155 500 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 ALKBH5Q6P6C2 394 aaKnown RBP15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 ADAT2Q7Z6V5 191 aaKnown RBP15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 ZNF668Q96K58 619 aaPredicted RBP15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 CCDC77Q9BR77 488 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 FUCA2Q9BTY2 467 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 ZNF302Q9NR11 478 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 SLC9A2Q9UBY0 812 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 IKBKGQ9Y6K9 419 aa15.41■□□□□ 0.06
SHROOM1-203ENST00000378679 TAL1P17542 331 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms