RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 RBAK-RBAKDNI3L0D1 243 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 FTCDO95954 541 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 USP17L24Q0WX57 530 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 SEPT2Q15019 361 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 FOXR2Q6PJQ5 311 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 USP17L6PQ6QN14 398 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 RBM17Q96I25 401 aaKnown RBP18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 SERPINB13Q9UIV8 391 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 PCDHA2Q9Y5H9 948 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 POTEB3A0JP26 581 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 GMNCA6NCL1 334 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 POTECB2RU33 542 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 MPHOSPH10O00566 681 aaKnown RBP18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 PLA2G4BP0C869 781 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 KLRC1P26715 233 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 ELF1P32519 619 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 RAPGEF1Q13905 1077 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 POTEBQ6S5H4 581 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 CCDC65Q8IXS2 484 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 NT5C3AQ9H0P0 336 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 ZHX3Q9H4I2 956 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 ACTR5Q9H9F9 607 aaPredicted RBP18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 ATP6V0A2Q9Y487 856 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 GRID2IPA4D2P6 1211 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 GCOM1H8Y6P7 765 aaPredicted RBP18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 ZBTB5O15062 677 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 RAD21O60216 631 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 MYZAPP0CAP1 466 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 IBSPP21815 317 aaPredicted RBP18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 HSPA9P38646 679 aaKnown RBP18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 PPP1R18Q6NYC8 613 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 GPBP1Q86WP2 473 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 TRIM59Q8IWR1 403 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 RNF217Q8TC41 542 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 SCFD1Q8WVM8 642 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 CEP63Q96MT8 703 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 NUCKS1Q9H1E3 243 aaKnown RBP18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 ADAMTS1Q9UHI8 967 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 ODF2LQ9ULJ1 636 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 SERPINB2P05120 415 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 HOXA7P31268 230 aaPredicted RBP18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 ADAM9Q13443 819 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 HLTFQ14527 1009 aaKnown RBP eCLIP18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 SNCBQ16143 134 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 CEP57Q86XR8 500 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 SYN2Q92777 582 aaPredicted RBP18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 EMILIN3Q9NT22 766 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 DDX20Q9UHI6 824 aaKnown RBP18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 PACSIN2Q9UNF0 486 aaPredicted RBP18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 UBR3Q6ZT12 1888 aa18.15■□□□□ 0.5
PCDHA1-201ENST00000378133 A0A087X0T9 212 aa18.14■□□□□ 0.5
PCDHA1-201ENST00000378133 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.14■□□□□ 0.5
PCDHA1-201ENST00000378133 IRF6O14896 467 aa18.14■□□□□ 0.5
PCDHA1-201ENST00000378133 RAD51CO43502 376 aa18.14■□□□□ 0.5
PCDHA1-201ENST00000378133 FAM228BP0C875 321 aa18.14■□□□□ 0.5
PCDHA1-201ENST00000378133 HYIQ5T013 277 aa18.14■□□□□ 0.5
PCDHA1-201ENST00000378133 WLSQ5T9L3 541 aa18.14■□□□□ 0.5
PCDHA1-201ENST00000378133 KLHL7Q8IXQ5 586 aa18.14■□□□□ 0.5
PCDHA1-201ENST00000378133 PARP9Q8IXQ6 854 aa18.14■□□□□ 0.5
PCDHA1-201ENST00000378133 FAM133AQ8N9E0 248 aa18.14■□□□□ 0.5
PCDHA1-201ENST00000378133 N4BP2L2Q92802 583 aaPredicted RBP18.14■□□□□ 0.5
PCDHA1-201ENST00000378133 PACSIN1Q9BY11 444 aa18.14■□□□□ 0.5
PCDHA1-201ENST00000378133 PLCB1Q9NQ66 1216 aa18.14■□□□□ 0.5
PCDHA1-201ENST00000378133 BBOX1O75936 387 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 GCFC2P16383 781 aaKnown RBP18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 STAT3P40763 770 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 NAB2Q15742 525 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 SLC18A3Q16572 532 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 KIAA0753Q2KHM9 967 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 POTEAQ6S8J7 498 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 ARHGAP27Q6ZUM4 889 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 MXD3Q9BW11 206 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 KCTD10Q9H3F6 313 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 TAF1DQ9H5J8 278 aaPredicted RBP18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 KDM3AQ9Y4C1 1321 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 GNA14O95837 355 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 CYP11B2P19099 503 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 SHMT1P34896 483 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 KLHL30Q0D2K2 578 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 CYB5D1Q6P9G0 228 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 LRIG3Q6UXM1 1119 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 VEZTQ9HBM0 779 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 USP40Q9NVE5 1235 aa18.14■□□□□ 0.49
PCDHA1-201ENST00000378133 KRT18P05783 430 aaKnown RBP18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 TNNC1P63316 161 aa18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 ODF2Q5BJF6 829 aa18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 SLC27A3Q5K4L6 730 aa18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 GPATCH4Q5T3I0 446 aaKnown RBP18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 FUKQ8N0W3 1084 aa18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 OR2W6PQ8NHA6 318 aa18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 OSBPL7Q9BZF2 842 aa18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 ATF5Q9Y2D1 282 aaPredicted RBP18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 DNM1LO00429 736 aa18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 HSD17B3P37058 310 aa18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 EPS15P42566 896 aa18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 SCNN1DP51172 638 aa18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 KCNH2Q12809 1159 aa18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 SGSM3Q96HU1 749 aa18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 LUC7LQ9NQ29 371 aaKnown RBP18.13■□□□□ 0.49
PCDHA1-201ENST00000378133 TRAPPC3O43617 180 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms