RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 C1QBPQ07021 282 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 TMEM62Q0P6H9 643 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 NPY5RQ15761 445 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 HERC6Q8IVU3 1022 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 CCDC83Q8IWF9 413 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 MYOCDQ8IZQ8 938 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 FAM177A1Q8N128 213 aaPredicted RBP13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 NSUN7Q8NE18 718 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 PHOSPHO2Q8TCD6 241 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 GBF1Q92538 1859 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 LENG9Q96B70 501 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 PRDM12Q9H4Q4 367 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 UPF2Q9HAU5 1272 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 GABBR1Q9UBS5 961 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 DDX25Q9UHL0 483 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 PCDHA10Q9Y5I2 948 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 IGKV6D-21A0A0A0MT36 114 aa13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 ABHD14A-ACY1A0A1B0GW23 586 aa13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 MBLAC1A4D2B0 266 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 M0R2N6 131 aa13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 MARCH6O60337 910 aa13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 HBP1O60381 514 aa13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 AMHP03971 560 aa13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 Q4G0T1 1027 aa13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 MARCH8Q5T0T0 291 aa13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 OXER1Q8TDS5 423 aa13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 ATP8B4Q8TF62 1192 aa13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 GAS2L1Q99501 681 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 CERS4Q9HA82 394 aa13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 DISC1Q9NRI5 854 aa13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 LIMCH1Q9UPQ0 1083 aa13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 CDY2AQ9Y6F7 541 aa13.08□□□□□ -0.32
SMARCE1-203ENST00000377808 EDIL3O43854 480 aa13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 CCNT1O60563 726 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 CHRNA1P02708 482 aa13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 FDPSP14324 419 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 IGFBP4P22692 258 aa13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 MRPS6P82932 125 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 PLEKHG4Q58EX7 1191 aa13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 MTHFD1LQ6UB35 978 aa13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.07□□□□□ -0.322e-7■■□□□ 13.5
SMARCE1-203ENST00000377808 MIER3Q7Z3K6 550 aa13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 NEK8Q86SG6 692 aa13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 SLC17A8Q8NDX2 589 aa13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 MAFAQ8NHW3 353 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 IFIH1Q9BYX4 1025 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 OSBPL7Q9BZF2 842 aa13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 UNC45AQ9H3U1 944 aa13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 GINS2Q9Y248 185 aa13.07□□□□□ -0.32
SMARCE1-203ENST00000377808 SLC37A4O43826 429 aa13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 UPP2O95045 317 aa13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 KLRC1P26715 233 aa13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 JAK3P52333 1124 aa13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 NR5A1Q13285 461 aa13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 ZNF484Q5JVG2 852 aa13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 FAM26DQ5JW98 314 aa13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 IER5Q5VY09 327 aa13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 BBXQ8WY36 941 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 PPM1EQ8WY54 764 aa13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 APBB2Q92870 758 aa13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 SLC5A5Q92911 643 aa13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 PPP1R16BQ96T49 567 aa13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 RIT2Q99578 217 aa13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 PCDHA2Q9Y5H9 948 aa13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 TRPV2Q9Y5S1 764 aa13.06□□□□□ -0.32
SMARCE1-203ENST00000377808 CYP3A7-CYP3A51PA0A087WV96 503 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 RPLP2P05387 115 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 ATP4AP20648 1035 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 IBSPP21815 317 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 CYP3A7P24462 503 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 SFNP31947 248 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 GUCY1B3Q02153 619 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 PRKCEQ02156 737 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 MGAT3Q09327 533 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 ST3GAL1Q11201 340 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 LPIN1Q14693 890 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 EARS2Q5JPH6 523 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 KRT40Q6A162 431 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 MOXD1Q6UVY6 613 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 RPAINQ86UA6 219 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 MICALL1Q8N3F8 863 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 METTL13Q8N6R0 699 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 ARNTL2Q8WYA1 636 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 FAM167AQ96KS9 214 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 NAP1L4Q99733 375 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 CEP131Q9UPN4 1083 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 MAFBQ9Y5Q3 323 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 IGSF9BQ9UPX0 1349 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 COL1A2P08123 1366 aa13.05□□□□□ -0.32
SMARCE1-203ENST00000377808 COL6A3P12111 3177 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 SMIM35A0A1B0GVV1 85 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 LCHNA4D1U4 455 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 FAM205CA6NFA0 338 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 PSMD10O75832 226 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 GJB5O95377 273 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 MMP1P03956 469 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 OATP04181 439 aa13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 GCFC2P16383 781 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 SAFBQ15424 915 aaKnown RBP eCLIP13.04□□□□□ -0.32
SMARCE1-203ENST00000377808 UGCGQ16739 394 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms