RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 GNA14O95837 355 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 EPHB4P54760 987 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 GIT2Q14161 759 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 CEP85LQ5SZL2 805 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 LRCH2Q5VUJ6 765 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 ZNF571Q7Z3V5 609 aaPredicted RBP14.15□□□□□ -0.14
USP11-204ENST00000377107 MICALL1Q8N3F8 863 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 CRAMP1Q96RY5 1269 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 EIF2AK1Q9BQI3 630 aaKnown RBP14.15□□□□□ -0.14
USP11-204ENST00000377107 TCEAL9Q9UHQ7 104 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 GOLGA6L10A6NI86 522 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 MEIS2O14770 477 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 SHTN1A0MZ66 631 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 AGPSO00116 658 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 KRIT1O00522 736 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 MSH4O15457 936 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 SORBS3O60504 671 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 GAS7O60861 476 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 SP4Q02446 784 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 GBP6Q6ZN66 633 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 GLYCTKQ8IVS8 523 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 ELMO3Q96BJ8 720 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 ZIM3Q96PE6 472 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.14□□□□□ -0.15
USP11-204ENST00000377107 EXOC3O60645 756 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 RAD17O75943 681 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 RPL13P26373 211 aaKnown RBP14.14□□□□□ -0.15
USP11-204ENST00000377107 LIG3P49916 1009 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 CDK17Q00537 523 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 NNTQ13423 1086 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 ODR4Q5SWX8 454 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 BANK1Q8NDB2 785 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 UHMK1Q8TAS1 419 aaKnown RBP14.14□□□□□ -0.15
USP11-204ENST00000377107 ACER1Q8TDN7 264 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 IQCDQ96DY2 449 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 CEP63Q96MT8 703 aa14.14□□□□□ -0.15
USP11-204ENST00000377107 FEZ2Q9UHY8 353 aaPredicted RBP14.14□□□□□ -0.15
USP11-204ENST00000377107 NDUFAB1O14561 156 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 BACH1O14867 736 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 RAD51CO43502 376 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 ATP2C2O75185 946 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 SNHG28P0DPA3 235 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 IBSPP21815 317 aaPredicted RBP14.13□□□□□ -0.15
USP11-204ENST00000377107 TNNC1P63316 161 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 PAK2Q13177 524 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 ZNF211Q13398 564 aaPredicted RBP14.13□□□□□ -0.15
USP11-204ENST00000377107 SRLQ86TD4 932 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 FAM186BQ8IYM0 893 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 MMGT1Q8N4V1 131 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 PURBQ96QR8 312 aaKnown RBP14.13□□□□□ -0.15
USP11-204ENST00000377107 SSU72P8A0A1W2PR75 194 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 ECE2O60344 883 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 H2AFZP0C0S5 128 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 ADRA2BP18089 450 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 H2AFVQ71UI9 128 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 HS2ST1Q7LGA3 356 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 FAM178BQ8IXR5 827 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 NUCKS1Q9H1E3 243 aaKnown RBP14.13□□□□□ -0.15
USP11-204ENST00000377107 PODXL2Q9NZ53 605 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 TMOD2Q9NZR1 351 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 CCDC88AQ3V6T2 1871 aa14.13□□□□□ -0.15
USP11-204ENST00000377107 GRID2IPA4D2P6 1211 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 EBAG9O00559 213 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 FLOT1O75955 427 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 APBA3O96018 575 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 ALDH1B1P30837 517 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 NAB2Q15742 525 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 RNF187Q5TA31 235 aaPredicted RBP14.12□□□□□ -0.15
USP11-204ENST00000377107 CERKQ8TCT0 537 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 FBXO28Q9NVF7 368 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 TLDC2A0PJX2 215 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 KRT13P13646 458 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 PON1P27169 355 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 HNRNPH3P31942 346 aaKnown RBP14.12□□□□□ -0.15
USP11-204ENST00000377107 USP11P51784 963 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 SLC12A3P55017 1021 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 GUCY1A3Q02108 690 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 PPFIA1Q13136 1202 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 ORC2Q13416 577 aaPredicted RBP14.12□□□□□ -0.15
USP11-204ENST00000377107 C15orf52Q6ZUT6 534 aaKnown RBP14.12□□□□□ -0.15
USP11-204ENST00000377107 HOOK2Q96ED9 719 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 TSPYL1Q9H0U9 437 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 KCTD10Q9H3F6 313 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 PPANQ9NQ55 473 aaKnown RBP14.12□□□□□ -0.15
USP11-204ENST00000377107 FAM198AQ9UFP1 575 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 AMACRQ9UHK6 382 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 H0YHG0 523 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 NPR1P16066 1061 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 STAT1P42224 750 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 NT5C2P49902 561 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 JAG1P78504 1218 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 SEMA3FQ13275 785 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 ZCWPW2Q504Y3 356 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 ZNF746Q6NUN9 644 aaPredicted RBP14.12□□□□□ -0.15
USP11-204ENST00000377107 PPP1R18Q6NYC8 613 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 AENQ8WTP8 325 aaKnown RBP14.12□□□□□ -0.15
USP11-204ENST00000377107 PRMT6Q96LA8 375 aaPredicted RBP14.12□□□□□ -0.15
USP11-204ENST00000377107 CELF4Q9BZC1 486 aaKnown RBP14.12□□□□□ -0.15
USP11-204ENST00000377107 PSD3Q9NYI0 1048 aa14.12□□□□□ -0.15
USP11-204ENST00000377107 POLD1P28340 1107 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms