RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SF3B2Q13435 895 aaKnown RBP15.37■□□□□ 0.05
MSH5-202ENST00000375740 LRCH2Q5VUJ6 765 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 TPH2Q8IWU9 490 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 MYOZ2Q9NPC6 264 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.37■□□□□ 0.05
MSH5-202ENST00000375740 ENC1O14682 589 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 CETN3O15182 167 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 CHMP2AO43633 222 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 PRPF6O94906 941 aaKnown RBP15.37■□□□□ 0.05
MSH5-202ENST00000375740 SYF2O95926 243 aaKnown RBP15.37■□□□□ 0.05
MSH5-202ENST00000375740 ASNSP08243 561 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 MYBP10242 640 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 INPP5BP32019 993 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 HOXD13P35453 343 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 SPA17Q15506 151 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 EDRF1Q3B7T1 1238 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 HSP90B2PQ58FF3 399 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 CIAPIN1Q6FI81 312 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 EPM2AIP1Q7L775 607 aaPredicted RBP15.37■□□□□ 0.05
MSH5-202ENST00000375740 CACNA2D4Q7Z3S7 1137 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 ZC3H3Q8IXZ2 948 aaKnown RBP15.37■□□□□ 0.05
MSH5-202ENST00000375740 FAM71BQ8TC56 605 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 PIGOQ8TEQ8 1089 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 SLC16A10Q8TF71 515 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 SLC5A5Q92911 643 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 DYDC2Q96IM9 177 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 EDEM3Q9BZQ6 932 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 RNF216Q9NWF9 866 aaPredicted RBP15.37■□□□□ 0.05
MSH5-202ENST00000375740 PIM2Q9P1W9 311 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 RNF40O75150 1001 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 ERLIN1O75477 346 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 WHAMMP3Q1A5X7 153 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 KNOP1Q1ED39 458 aaKnown RBP15.36■□□□□ 0.05
MSH5-202ENST00000375740 PDXDC1Q6P996 788 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 PPP4R3CPQ6ZMV5 832 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 TADA2BQ86TJ2 420 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 AGBL1Q96MI9 1066 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 GDAP1L1Q96MZ0 367 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 RABEP2Q9H5N1 569 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 HDAC6Q9UBN7 1215 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 PPFIA4O75335 1185 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 NOL4O94818 638 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 ARP10275 920 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 NR2F2P24468 414 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 PTGER2P43116 358 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 VAV2P52735 878 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 RASA3Q14644 834 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 CEP55Q53EZ4 464 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 RINT1Q6NUQ1 792 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 CRACR2AQ9BSW2 395 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 ZNF341Q9BYN7 854 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 EHMT1Q9H9B1 1298 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 TUFT1Q9NNX1 390 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 NLRC4Q9NPP4 1024 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 TRAF3IP3Q9Y228 551 aa15.36■□□□□ 0.05
MSH5-202ENST00000375740 SFI1A8K8P3 1242 aa15.35■□□□□ 0.05
MSH5-202ENST00000375740 PHF20L1A8MW92 1017 aa15.35■□□□□ 0.05
MSH5-202ENST00000375740 ZBTB39O15060 712 aa15.35■□□□□ 0.05
MSH5-202ENST00000375740 ATP1A1P05023 1023 aaKnown RBP15.35■□□□□ 0.05
MSH5-202ENST00000375740 KIF11P52732 1056 aa15.35■□□□□ 0.05
MSH5-202ENST00000375740 KIF5AQ12840 1032 aa15.35■□□□□ 0.05
MSH5-202ENST00000375740 PPP2R5CQ13362 524 aa15.35■□□□□ 0.05
MSH5-202ENST00000375740 LSM14BQ9BX40 385 aaKnown RBP15.35■□□□□ 0.05
MSH5-202ENST00000375740 PCDHA13Q9Y5I0 950 aa15.35■□□□□ 0.05
MSH5-202ENST00000375740 GAS7O60861 476 aa15.35■□□□□ 0.05
MSH5-202ENST00000375740 LIG3P49916 1009 aa15.35■□□□□ 0.05
MSH5-202ENST00000375740 PRELPP51888 382 aa15.35■□□□□ 0.05
MSH5-202ENST00000375740 MMS22LQ6ZRQ5 1243 aa15.35■□□□□ 0.05
MSH5-202ENST00000375740 TRAPPC11Q7Z392 1133 aa15.35■□□□□ 0.05
MSH5-202ENST00000375740 FAM184BQ9ULE4 1060 aa15.35■□□□□ 0.05
MSH5-202ENST00000375740 AKR1B10O60218 316 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 TBCAO75347 108 aaKnown RBP15.34■□□□□ 0.05
MSH5-202ENST00000375740 CPP00450 1065 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 POLD1P28340 1107 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 APBA1Q02410 837 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 SUGP1Q8IWZ8 645 aaKnown RBP15.34■□□□□ 0.05
MSH5-202ENST00000375740 EFCAB13Q8IY85 973 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 KCTD17Q8N5Z5 321 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 EHBP1Q8NDI1 1231 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 PURBQ96QR8 312 aaKnown RBP15.34■□□□□ 0.05
MSH5-202ENST00000375740 ZNF577Q9BSK1 485 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 CEP72Q9P209 647 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 MACROD2A1Z1Q3 448 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 CTAGE15A4D2H0 777 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 LCA5LO95447 670 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 EGFRP00533 1210 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 CTAGE8P0CG41 777 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 KCNH2Q12809 1159 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 CTAGE6Q86UF2 777 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 CTAGE4Q8IX94 777 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 JDP2Q8WYK2 163 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 IFIH1Q9BYX4 1025 aaKnown RBP15.34■□□□□ 0.05
MSH5-202ENST00000375740 CCPG1Q9ULG6 757 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 ZNF536O15090 1300 aa15.34■□□□□ 0.05
MSH5-202ENST00000375740 PDXKO00764 312 aa15.33■□□□□ 0.05
MSH5-202ENST00000375740 CALUO43852 315 aaPredicted RBP15.33■□□□□ 0.05
MSH5-202ENST00000375740 GCNT3O95395 438 aa15.33■□□□□ 0.05
MSH5-202ENST00000375740 POLR2FP61218 127 aaKnown RBP15.33■□□□□ 0.05
MSH5-202ENST00000375740 DNAJC21Q5F1R6 531 aaKnown RBP15.33■□□□□ 0.05
MSH5-202ENST00000375740 PAPD7Q5XG87 772 aaKnown RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms