RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 NOC2LQ9Y3T9 749 aaKnown RBP18.19■□□□□ 0.5
VARS-215ENST00000375663 PHBP35232 272 aa18.19■□□□□ 0.5
VARS-215ENST00000375663 ZNF211Q13398 564 aaPredicted RBP18.19■□□□□ 0.5
VARS-215ENST00000375663 TRIP13Q15645 432 aaPredicted RBP18.19■□□□□ 0.5
VARS-215ENST00000375663 SLC18A3Q16572 532 aa18.19■□□□□ 0.5
VARS-215ENST00000375663 KNOP1Q1ED39 458 aaKnown RBP18.19■□□□□ 0.5
VARS-215ENST00000375663 FBXW10Q5XX13 1052 aa18.19■□□□□ 0.5
VARS-215ENST00000375663 PIGOQ8TEQ8 1089 aa18.19■□□□□ 0.5
VARS-215ENST00000375663 PODXLO00592 558 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 CARSP49589 748 aaKnown RBP18.18■□□□□ 0.5
VARS-215ENST00000375663 ACTN3Q08043 901 aaPredicted RBP18.18■□□□□ 0.5
VARS-215ENST00000375663 CTTNQ14247 550 aaKnown RBP18.18■□□□□ 0.5
VARS-215ENST00000375663 TAB3Q8N5C8 712 aaPredicted RBP18.18■□□□□ 0.5
VARS-215ENST00000375663 LACRTQ9GZZ8 138 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 ZBTB5O15062 677 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 SART1O43290 800 aaKnown RBP18.18■□□□□ 0.5
VARS-215ENST00000375663 LIG4P49917 911 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 CASP7P55210 303 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 ITIH3Q06033 890 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 GDAP1Q8TB36 358 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 RILPQ96NA2 401 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 DUSP10Q9Y6W6 482 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 ZRANB2O95218 330 aaKnown RBP eCLIP18.18■□□□□ 0.55e-11■□□□□ 9.8
VARS-215ENST00000375663 CORO7P57737 925 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 TBX2Q13207 712 aaPredicted RBP18.18■□□□□ 0.5
VARS-215ENST00000375663 GRAPQ13588 217 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 NAALADL2Q58DX5 795 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 MMGT1Q8N4V1 131 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 BANK1Q8NDB2 785 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 NEDD1Q8NHV4 660 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 GRAPLQ8TC17 118 aaPredicted RBP18.18■□□□□ 0.5
VARS-215ENST00000375663 CCT8L2Q96SF2 557 aa18.18■□□□□ 0.5
VARS-215ENST00000375663 SLIT1O75093 1534 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 POTEFA5A3E0 1075 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 POTEIP0CG38 1075 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 HOXA13P31271 388 aaPredicted RBP18.17■□□□□ 0.5
VARS-215ENST00000375663 MDH1P40925 334 aaKnown RBP18.17■□□□□ 0.5
VARS-215ENST00000375663 POTEGQ6S5H5 508 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 POTEEQ6S8J3 1075 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 RPAINQ86UA6 219 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 CCDC110Q8TBZ0 833 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 DCAF8L1A6NGE4 600 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 MYMKA6NI61 221 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 GDF11O95390 407 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 BMP3P12645 472 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 ALDH1B1P30837 517 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 ZNF34Q8IZ26 560 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 ACCSQ96QU6 501 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 ERGIC2Q96RQ1 377 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 LMTK3Q96Q04 1460 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 MIF4GDA9UHW6 222 aaKnown RBP18.17■□□□□ 0.5
VARS-215ENST00000375663 DMP1Q13316 513 aaPredicted RBP18.17■□□□□ 0.5
VARS-215ENST00000375663 HVCN1Q96D96 273 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 ZIM3Q96PE6 472 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 EPN3Q9H201 632 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 SLITRK6Q9H5Y7 841 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 PLAGL2Q9UPG8 496 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 HNRNPDLO14979 420 aaKnown RBP18.17■□□□□ 0.5
VARS-215ENST00000375663 BBOX1O75936 387 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 BPIFB4P59827 614 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 TMED2Q15363 201 aa18.17■□□□□ 0.5
VARS-215ENST00000375663 DIS3Q9Y2L1 958 aaKnown RBP18.17■□□□□ 0.5
VARS-215ENST00000375663 SYNGAP1Q96PV0 1343 aa18.16■□□□□ 0.5
VARS-215ENST00000375663 DIP2BQ9P265 1576 aa18.16■□□□□ 0.5
VARS-215ENST00000375663 TNS3Q68CZ2 1445 aa18.16■□□□□ 0.5
VARS-215ENST00000375663 PLEKP08567 350 aaPredicted RBP18.16■□□□□ 0.5
VARS-215ENST00000375663 SARSP49591 514 aaKnown RBP18.16■□□□□ 0.5
VARS-215ENST00000375663 DLGAP5Q15398 846 aa18.16■□□□□ 0.5
VARS-215ENST00000375663 LRRC31Q6UY01 552 aa18.16■□□□□ 0.5
VARS-215ENST00000375663 DNAJC7Q99615 494 aa18.16■□□□□ 0.5
VARS-215ENST00000375663 TMEM206Q9H813 350 aa18.16■□□□□ 0.5
VARS-215ENST00000375663 RWDD2BP57060 319 aa18.16■□□□□ 0.5
VARS-215ENST00000375663 LMNB2Q03252 620 aa18.16■□□□□ 0.5
VARS-215ENST00000375663 GLYCTKQ8IVS8 523 aa18.16■□□□□ 0.5
VARS-215ENST00000375663 DEPTORQ8TB45 409 aa18.16■□□□□ 0.5
VARS-215ENST00000375663 ZBED4O75132 1171 aa18.16■□□□□ 0.5
VARS-215ENST00000375663 LSP1P33241 339 aa18.16■□□□□ 0.5
VARS-215ENST00000375663 PDIA5Q14554 519 aa18.16■□□□□ 0.5
VARS-215ENST00000375663 USP17L10C9JJH3 530 aa18.15■□□□□ 0.5
VARS-215ENST00000375663 LUC7L3O95232 432 aaKnown RBP18.15■□□□□ 0.5
VARS-215ENST00000375663 KRT19P08727 400 aa18.15■□□□□ 0.5
VARS-215ENST00000375663 NBPF9Q3BBW0 867 aa18.15■□□□□ 0.5
VARS-215ENST00000375663 SDCCAG8Q86SQ7 713 aaPredicted RBP18.15■□□□□ 0.5
VARS-215ENST00000375663 HOOK2Q96ED9 719 aa18.15■□□□□ 0.5
VARS-215ENST00000375663 EHD2Q9NZN4 543 aa18.15■□□□□ 0.5
VARS-215ENST00000375663 KCNG1Q9UIX4 513 aa18.15■□□□□ 0.5
VARS-215ENST00000375663 A0A1W2PQJ5 194 aa18.15■□□□□ 0.5
VARS-215ENST00000375663 PMS2P54278 862 aa18.15■□□□□ 0.5
VARS-215ENST00000375663 SNAP25P60880 206 aa18.15■□□□□ 0.5
VARS-215ENST00000375663 PHLDB3Q6NSJ2 640 aa18.15■□□□□ 0.5
VARS-215ENST00000375663 APBB1IPQ7Z5R6 666 aaPredicted RBP18.15■□□□□ 0.5
VARS-215ENST00000375663 ZNF473Q8WTR7 871 aaKnown RBP18.15■□□□□ 0.5
VARS-215ENST00000375663 AGLP35573 1532 aa18.15■□□□□ 0.5
VARS-215ENST00000375663 OVOS2A0A0G2JMS6 1433 aa18.15■□□□□ 0.5
VARS-215ENST00000375663 TFRCP02786 760 aaKnown RBP18.15■□□□□ 0.5
VARS-215ENST00000375663 DRAP1Q14919 205 aaPredicted RBP18.15■□□□□ 0.5
VARS-215ENST00000375663 SBK1Q52WX2 424 aa18.15■□□□□ 0.5
VARS-215ENST00000375663 FAM196AQ6ZSG2 479 aa18.15■□□□□ 0.5
VARS-215ENST00000375663 RAB21Q9UL25 225 aa18.15■□□□□ 0.5
VARS-215ENST00000375663 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms