RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 NIM1KQ8IY84 436 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 METTL13Q8N6R0 699 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 PIGOQ8TEQ8 1089 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 CDKL2Q92772 493 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 HOXA13P31271 388 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-203ENST00000375274 STAT2P52630 851 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 SH3BGRP55822 239 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-203ENST00000375274 RBM43Q6ZSC3 357 aaKnown RBP12.45□□□□□ -0.42
PTCH1-203ENST00000375274 TRIM50Q86XT4 487 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 CCHCR1Q8TD31 782 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 CEP170P1Q96L14 293 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 DDX23Q9BUQ8 820 aaKnown RBP12.45□□□□□ -0.42
PTCH1-203ENST00000375274 SPATS2LQ9NUQ6 558 aaKnown RBP12.45□□□□□ -0.42
PTCH1-203ENST00000375274 POTEB3A0JP26 581 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 POTECB2RU33 542 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 USP17L15C9J2P7 530 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 USP17L13C9JLJ4 530 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 USP17L11C9JVI0 530 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 USP17L18D6R9N7 530 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 USP17L22D6RA61 530 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 USP17L17D6RBQ6 530 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 USP17L19D6RCP7 530 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 USP17L20D6RJB6 530 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 ZBTB5O15062 677 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 ZNF185O15231 689 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 ORC4O43929 436 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 PDE1BQ01064 536 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 USP17L24Q0WX57 530 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 AP3B2Q13367 1082 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 USP17L6PQ6QN14 398 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 POTEBQ6S5H4 581 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 NLRP14Q86W24 1093 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 SLC7A3Q8WY07 619 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTCH1-203ENST00000375274 PITPNM3Q9BZ71 974 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 GOLGA8SH3BPF8 625 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 SMIM24O75264 130 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 MT-ND3P03897 115 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 KRT1P04264 644 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 GYPCP04921 128 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 SERPINB2P05120 415 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 PPP2R5CQ13362 524 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 PPP2R5AQ15172 486 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 BEND6Q5SZJ8 279 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-203ENST00000375274 CC2D2BQ6DHV5 1058 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 PPP1R2P3Q6NXS1 205 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 ZNF449Q6P9G9 518 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 FAM196AQ6ZSG2 479 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 CEP95Q96GE4 821 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 PHF20Q9BVI0 1012 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 AGPAT5Q9NUQ2 364 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 IVNS1ABPQ9Y6Y0 642 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 AP5Z1O43299 807 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 PPP1R37O75864 691 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 SRGNP10124 158 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 SERPINB6P35237 376 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 KNOP1Q1ED39 458 aaKnown RBP12.44□□□□□ -0.42
PTCH1-203ENST00000375274 AP1ARQ63HQ0 302 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 DNAJC24Q6P3W2 148 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 TMC4Q7Z404 712 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 TRIM42Q8IWZ5 723 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 RIN2Q8WYP3 895 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-203ENST00000375274 NOP53Q9NZM5 478 aaKnown RBP12.44□□□□□ -0.42
PTCH1-203ENST00000375274 USP21Q9UK80 565 aa12.44□□□□□ -0.42
PTCH1-203ENST00000375274 GRAPQ13588 217 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 RINT1Q6NUQ1 792 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 CCNI2Q6ZMN8 369 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-203ENST00000375274 RFX6Q8HWS3 928 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 REXO1L1PQ8IX06 675 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 NOA1Q8NC60 698 aaKnown RBP12.43□□□□□ -0.42
PTCH1-203ENST00000375274 GRAPLQ8TC17 118 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-203ENST00000375274 CELF1Q92879 486 aaKnown RBP12.43□□□□□ -0.42
PTCH1-203ENST00000375274 TMEM260Q9NX78 707 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 SEPT9Q9UHD8 586 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-203ENST00000375274 ABCA9Q8IUA7 1624 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 A0A0G2JLW4 131 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 TRIM66O15016 1216 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 BASP1P80723 227 aaKnown RBP12.43□□□□□ -0.42
PTCH1-203ENST00000375274 NXNQ6DKJ4 435 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 PDXDC1Q6P996 788 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 POLD4Q9HCU8 107 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 TRIM10Q9UDY6 481 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 SRP68Q9UHB9 627 aaKnown RBP12.43□□□□□ -0.42
PTCH1-203ENST00000375274 RFX5P48382 616 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-203ENST00000375274 DYNLT1P63172 113 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 GUCY1A3Q02108 690 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 ZNF211Q13398 564 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-203ENST00000375274 ALCAMQ13740 583 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 BBS9Q3SYG4 887 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 TBC1D9BQ66K14 1250 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 STAG2Q8N3U4 1231 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 Q9H521 79 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 PFDN4Q9NQP4 134 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 PTPRMP28827 1452 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 SPATA31A3Q5VYP0 1347 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 SALL3Q9BXA9 1300 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 WDR91A4D1P6 747 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 GOLGA8IPA6NC78 632 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 GOLGA8JA6NMD2 632 aa12.43□□□□□ -0.42
PTCH1-203ENST00000375274 PPEF1O14829 653 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms