RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 PPARGC1AQ9UBK2 798 aaKnown RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 SEL1LQ9UBV2 794 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 GSTA4O15217 222 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 CLK1P49759 484 aaKnown RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 KRT74Q7RTS7 529 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 ANKLE2Q86XL3 938 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 ZNF555Q8NEP9 628 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 PCDHGA3Q9Y5H0 932 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 POTEMA6NI47 508 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 POTEHQ6S545 545 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 POTEGQ6S5H5 508 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 FAM43BQ6ZT52 329 aaPredicted RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 HPCAL4Q9UM19 191 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 STAMQ92783 540 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 ABHD8Q96I13 439 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 GGNBP2Q9H3C7 697 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 RXFP1Q9HBX9 757 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 SNAP25P60880 206 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 FKBP3Q00688 224 aaKnown RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 SETD3Q86TU7 594 aaPredicted RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 ELOA2Q8IYF1 753 aaPredicted RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 KCNV2Q8TDN2 545 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 AK8Q96MA6 479 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 KLHL4Q9C0H6 718 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 LZTS3O60299 673 aaPredicted RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 ENKURQ8TC29 256 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 ZFAND2BQ8WV99 257 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 HMG20AQ9NP66 347 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 L3MBTL1Q9Y468 752 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 PCDHB13Q9Y5F0 798 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 NPC1L1Q9UHC9 1359 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 CALB2P22676 271 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.08□□□□□ -1.28
UBR4-204ENST00000375254 IARS2Q9NSE4 1012 aaKnown RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 PDE4DQ08499 809 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 APBB2Q92870 758 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 PDCD10Q9BUL8 212 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 PAIP1Q9H074 479 aaKnown RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 METTL5Q9NRN9 209 aaKnown RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 RASA4BC9J798 803 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 PRR23D1E9PI22 279 aaPredicted RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 RASA4O43374 803 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 TJP3O95049 919 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 PRR23D2P0DMB1 279 aaPredicted RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 GSTO1P78417 241 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 TMPRSS15P98073 1019 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 EME1Q96AY2 570 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 XPO6Q96QU8 1125 aaKnown RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 FNBP1Q96RU3 617 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 PLEKHA4Q9H4M7 779 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 TMED5Q9Y3A6 229 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 A0A087WXM4 84 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 DLGAP3O95886 979 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 ACADVLP49748 655 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 GGT6Q6P531 493 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 TAS2R42Q7RTR8 314 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 ARL10Q8N8L6 244 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 FUT8Q9BYC5 575 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 A0A0G2JND7 137 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 ANKRD65E5RJM6 399 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 H3BNX3 289 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 SLC34A1Q06495 639 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 MICU2Q8IYU8 434 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 PROCA1Q8NCQ7 364 aaPredicted RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 GALNT8Q9NY28 637 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 SQORQ9Y6N5 450 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 ZMYND10O75800 440 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 ZCCHC7Q8N3Z6 543 aaKnown RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 RANBP17Q9H2T7 1088 aaKnown RBP7.08□□□□□ -1.28
UBR4-204ENST00000375254 THAP9Q9H5L6 903 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 C15orf41Q9Y2V0 281 aa7.08□□□□□ -1.28
UBR4-204ENST00000375254 POLR2BP30876 1174 aaKnown RBP7.07□□□□□ -1.28
UBR4-204ENST00000375254 NR1H2P55055 460 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 SAGE2PA6NJ88 616 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 H0Y3Z8 333 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 VDRP11473 427 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 DGUOKQ16854 277 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 PACS2Q86VP3 889 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 LENG1Q96BZ8 264 aaPredicted RBP7.07□□□□□ -1.28
UBR4-204ENST00000375254 SULT6B1Q6IMI4 303 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 RBM12BQ8IXT5 1001 aaKnown RBP7.07□□□□□ -1.28
UBR4-204ENST00000375254 PYROXD1Q8WU10 500 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.07□□□□□ -1.286e-11■■■■■ 61.2
UBR4-204ENST00000375254 MRPL47Q9HD33 250 aaKnown RBP7.07□□□□□ -1.28
UBR4-204ENST00000375254 METTL24Q5JXM2 366 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 MINDY2Q8NBR6 621 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 COX4I2Q96KJ9 171 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 TUBGCP2Q9BSJ2 902 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 UBN1Q9NPG3 1134 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 NFIBO00712 420 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 ARMCX4Q5H9R4 360 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 TMEM110Q86TL2 294 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 BEGAINQ9BUH8 593 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 ASPSCR1Q9BZE9 553 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 CEP44Q9C0F1 390 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 PIH1D3Q9NQM4 214 aaKnown RBP7.07□□□□□ -1.28
UBR4-204ENST00000375254 LZTS1Q9Y250 596 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 PDLIM1O00151 329 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 ITIH2P19823 946 aa7.07□□□□□ -1.28
UBR4-204ENST00000375254 TBC1D9BQ66K14 1250 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms