RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 FMNL3Q8IVF7 1028 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 PACSIN1Q9BY11 444 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 TMX4Q9H1E5 349 aaPredicted RBP12.48□□□□□ -0.41
PTPN20-204ENST00000374346 ISCUQ9H1K1 167 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 NAGPAQ9UK23 515 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 PACSIN2Q9UNF0 486 aaPredicted RBP12.48□□□□□ -0.41
PTPN20-204ENST00000374346 GRIN2DO15399 1336 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 CCDC188H7C350 402 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 GYS1P13807 737 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 PON1P27169 355 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 GUCY2FP51841 1108 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 PABPC4Q13310 644 aaKnown RBP eCLIP12.48□□□□□ -0.41
PTPN20-204ENST00000374346 SLFN13Q68D06 897 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.48□□□□□ -0.41
PTPN20-204ENST00000374346 KLHL7Q8IXQ5 586 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 ARFGAP2Q8N6H7 521 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 MKL1Q969V6 931 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 TMEM59LQ9UK28 342 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 INTUQ9ULD6 942 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 LRRC37AA6NMS7 1700 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 GTPBP10A4D1E9 387 aaKnown RBP12.47□□□□□ -0.41
PTPN20-204ENST00000374346 PGRMC1O00264 195 aaKnown RBP12.47□□□□□ -0.41
PTPN20-204ENST00000374346 RAD51CO43502 376 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 ZEB2O60315 1214 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 SLC9A1P19634 815 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 STAT3P40763 770 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 RNASE9P60153 205 aaKnown RBP12.47□□□□□ -0.41
PTPN20-204ENST00000374346 KCTD16Q68DU8 428 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 CDC42EP5Q6NZY7 148 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 MICALCLQ6ZW33 695 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 ZNF571Q7Z3V5 609 aaPredicted RBP12.47□□□□□ -0.41
PTPN20-204ENST00000374346 MAATS1Q7Z4T9 603 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 SFR1Q86XK3 245 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 ETNPPLQ8TBG4 499 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 CASKIN2Q8WXE0 1202 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 REEP2Q9BRK0 252 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 NYAP2Q9P242 653 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 FAM169AQ9Y6X4 670 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 A0A0A6YYK5 440 aaPredicted RBP12.47□□□□□ -0.41
PTPN20-204ENST00000374346 ZNF233A6NK53 670 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 TMCO5BA8MYB1 307 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 CEP104O60308 925 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 TOM1O60784 492 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 NR3C1P04150 777 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 ACTN1P12814 892 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 GAP43P17677 238 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 NR1D1P20393 614 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 HSPA9P38646 679 aaKnown RBP12.47□□□□□ -0.41
PTPN20-204ENST00000374346 BMT2Q1RMZ1 405 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 CERKLQ49MI3 558 aaPredicted RBP12.47□□□□□ -0.41
PTPN20-204ENST00000374346 EMC10Q5UCC4 262 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 EPM2AIP1Q7L775 607 aaPredicted RBP12.47□□□□□ -0.41
PTPN20-204ENST00000374346 PEX26Q7Z412 305 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 CCDC26Q8TAB7 109 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 ATP6V1G3Q96LB4 118 aa12.47□□□□□ -0.41
PTPN20-204ENST00000374346 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.47□□□□□ -0.41
PTPN20-204ENST00000374346 LTBP1Q14766 1721 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 ATXN2Q99700 1313 aaKnown RBP12.46□□□□□ -0.41
PTPN20-204ENST00000374346 ZSCAN5CA6NGD5 496 aaPredicted RBP12.46□□□□□ -0.41
PTPN20-204ENST00000374346 MEIS2O14770 477 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 GFPT2O94808 682 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 KIAA0754O94854 1291 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 GCNT3O95395 438 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 H2AFZP0C0S5 128 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 FAM153BP0C7A2 387 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 CCDC172P0C7W6 258 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 EEF2P13639 858 aaKnown RBP12.46□□□□□ -0.41
PTPN20-204ENST00000374346 FERP16591 822 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 CASP5P51878 434 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 SPIRE1Q08AE8 756 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 FAM153CQ494X1 144 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 FAM182BQ5T319 152 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 LRIG3Q6UXM1 1119 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 H2AFVQ71UI9 128 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 UIMC1Q96RL1 719 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 GCNT4Q9P109 453 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 PI4KBQ9UBF8 816 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 FAM153AQ9UHL3 310 aa12.46□□□□□ -0.41
PTPN20-204ENST00000374346 GCOM1H8Y6P7 765 aaPredicted RBP12.46□□□□□ -0.42
PTPN20-204ENST00000374346 ERLIN2O94905 339 aa12.46□□□□□ -0.42
PTPN20-204ENST00000374346 CPP00450 1065 aa12.46□□□□□ -0.42
PTPN20-204ENST00000374346 MYZAPP0CAP1 466 aa12.46□□□□□ -0.42
PTPN20-204ENST00000374346 ZNF76P36508 570 aa12.46□□□□□ -0.42
PTPN20-204ENST00000374346 SCNN1DP51172 638 aa12.46□□□□□ -0.42
PTPN20-204ENST00000374346 NPEPPSP55786 919 aa12.46□□□□□ -0.42
PTPN20-204ENST00000374346 IKQ13123 557 aaPredicted RBP12.46□□□□□ -0.42
PTPN20-204ENST00000374346 MTMR3Q13615 1198 aa12.46□□□□□ -0.42
PTPN20-204ENST00000374346 RUFY4Q6ZNE9 571 aa12.46□□□□□ -0.42
PTPN20-204ENST00000374346 FBXO11Q86XK2 927 aa12.46□□□□□ -0.42
PTPN20-204ENST00000374346 MICALL1Q8N3F8 863 aa12.46□□□□□ -0.42
PTPN20-204ENST00000374346 USP21Q9UK80 565 aa12.46□□□□□ -0.42
PTPN20-204ENST00000374346 RABGAP1Q9Y3P9 1069 aa12.46□□□□□ -0.42
PTPN20-204ENST00000374346 THSD7AQ9UPZ6 1657 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 UBR3Q6ZT12 1888 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 MEIS1O00470 390 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 AKAP3O75969 853 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 MYBP10242 640 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 SREBF1P36956 1147 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 STAT1P42224 750 aa12.45□□□□□ -0.42
PTPN20-204ENST00000374346 ATP1A2P50993 1020 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms