RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 SERPINB2P05120 415 aa18.83■□□□□ 0.61
PTPRU-202ENST00000373779 GUCY2CP25092 1073 aa18.83■□□□□ 0.61
PTPRU-202ENST00000373779 TOB1P50616 345 aaPredicted RBP18.83■□□□□ 0.61
PTPRU-202ENST00000373779 SNX16P57768 344 aa18.83■□□□□ 0.61
PTPRU-202ENST00000373779 TMED2Q15363 201 aa18.83■□□□□ 0.61
PTPRU-202ENST00000373779 KSR1Q8IVT5 923 aa18.83■□□□□ 0.61
PTPRU-202ENST00000373779 ERVK-24P63145 666 aa18.83■□□□□ 0.61
PTPRU-202ENST00000373779 CYP4F22Q6NT55 531 aa18.83■□□□□ 0.61
PTPRU-202ENST00000373779 RIN2Q8WYP3 895 aaPredicted RBP18.83■□□□□ 0.61
PTPRU-202ENST00000373779 USP21Q9UK80 565 aa18.83■□□□□ 0.61
PTPRU-202ENST00000373779 MIF4GDA9UHW6 222 aaKnown RBP18.83■□□□□ 0.6
PTPRU-202ENST00000373779 TRIM66O15016 1216 aa18.83■□□□□ 0.6
PTPRU-202ENST00000373779 ZNF34Q8IZ26 560 aa18.83■□□□□ 0.6
PTPRU-202ENST00000373779 AZI2Q9H6S1 392 aa18.83■□□□□ 0.6
PTPRU-202ENST00000373779 HOXA13P31271 388 aaPredicted RBP18.83■□□□□ 0.6
PTPRU-202ENST00000373779 STK4Q13043 487 aa18.83■□□□□ 0.6
PTPRU-202ENST00000373779 PHLDB2Q86SQ0 1253 aa18.83■□□□□ 0.6
PTPRU-202ENST00000373779 NOC2LQ9Y3T9 749 aaKnown RBP18.83■□□□□ 0.6
PTPRU-202ENST00000373779 TBC1D10BQ4KMP7 808 aaPredicted RBP18.82■□□□□ 0.6
PTPRU-202ENST00000373779 BEND6Q5SZJ8 279 aaPredicted RBP18.82■□□□□ 0.6
PTPRU-202ENST00000373779 USP17L15C9J2P7 530 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 USP17L13C9JLJ4 530 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 USP17L11C9JVI0 530 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 USP17L18D6R9N7 530 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 USP17L22D6RA61 530 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 USP17L17D6RBQ6 530 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 USP17L19D6RCP7 530 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 USP17L20D6RJB6 530 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 NOP56O00567 594 aaKnown RBP18.82■□□□□ 0.6
PTPRU-202ENST00000373779 RWDD2BP57060 319 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 USP17L24Q0WX57 530 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 GNPTABQ3T906 1256 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 USP17L6PQ6QN14 398 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 FAM196AQ6ZSG2 479 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 CSRNP1Q96S65 589 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 TBK1Q9UHD2 729 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 A0A1W2PQJ5 194 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 SSU72P8A0A1W2PR75 194 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 STAT2P52630 851 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 CASC4Q6P4E1 433 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 ELAC2Q9BQ52 826 aaKnown RBP18.82■□□□□ 0.6
PTPRU-202ENST00000373779 PI4KBQ9UBF8 816 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 ANAPC4Q9UJX5 808 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 SBK1Q52WX2 424 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 GDAP1Q8TB36 358 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 MS4A14Q96JA4 679 aa18.82■□□□□ 0.6
PTPRU-202ENST00000373779 SALL1Q9NSC2 1324 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 TRIP13Q15645 432 aaPredicted RBP18.81■□□□□ 0.6
PTPRU-202ENST00000373779 SLITRK6Q9H5Y7 841 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 PCDHB4Q9Y5E5 795 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 ANKRD26Q9UPS8 1709 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 CHUKO15111 745 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 EIF3HO15372 352 aaKnown RBP eCLIP18.81■□□□□ 0.6
PTPRU-202ENST00000373779 SNAP25P60880 206 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 GUCY1A3Q02108 690 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 PHLDB3Q6NSJ2 640 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 NEDD1Q8NHV4 660 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 PIGOQ8TEQ8 1089 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 DCAF4Q8WV16 495 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 VCX3BQ9H321 246 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 USP17L10C9JJH3 530 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 ALCAMQ13740 583 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 PDIA5Q14554 519 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 SDCCAG8Q86SQ7 713 aaPredicted RBP18.81■□□□□ 0.6
PTPRU-202ENST00000373779 FAM81BQ96LP2 452 aa18.81■□□□□ 0.6
PTPRU-202ENST00000373779 POTEFA5A3E0 1075 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 ACSL3O95573 720 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 POTEIP0CG38 1075 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 KLK7P49862 253 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 SESN3P58005 492 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 RASA3Q14644 834 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 TBC1D9BQ66K14 1250 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 POTEGQ6S5H5 508 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 POTEEQ6S8J3 1075 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 ZNF354CQ86Y25 554 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 LRRN4CLQ8ND94 238 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 TAB3Q8N5C8 712 aaPredicted RBP18.8■□□□□ 0.6
PTPRU-202ENST00000373779 CFAP57Q96MR6 1250 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 KMT5AQ9NQR1 393 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 SGK1O00141 431 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 EVI5O60447 810 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 PMS2P54278 862 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 HOOK2Q96ED9 719 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 PXDNQ92626 1479 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 SARNPP82979 210 aaKnown RBP18.8■□□□□ 0.6
PTPRU-202ENST00000373779 SLC18A3Q16572 532 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 TXLNGQ9NUQ3 528 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 FBXL5Q9UKA1 691 aa18.8■□□□□ 0.6
PTPRU-202ENST00000373779 ATP2A3Q93084 1043 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 TRPC6Q9Y210 931 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 POLR2BP30876 1174 aaKnown RBP18.79■□□□□ 0.6
PTPRU-202ENST00000373779 PSMC4P43686 418 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 NTRK3Q16288 839 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 RSRC2Q7L4I2 434 aaKnown RBP18.79■□□□□ 0.6
PTPRU-202ENST00000373779 TBC1D1Q86TI0 1168 aaPredicted RBP18.79■□□□□ 0.6
PTPRU-202ENST00000373779 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.79■□□□□ 0.6
PTPRU-202ENST00000373779 NARFQ9UHQ1 456 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 PLEKHG2Q9H7P9 1386 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 SLC8A3P57103 927 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 NUGGCQ68CJ6 796 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 246.9 ms