RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TMOD1P28289 359 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 CCND2P30279 289 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 FAM133BQ5BKY9 247 aaKnown RBP15.3■□□□□ 0.04
LMX1B-202ENST00000373474 ZNF449Q6P9G9 518 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 TMED8Q6PL24 325 aaPredicted RBP15.3■□□□□ 0.04
LMX1B-202ENST00000373474 OXER1Q8TDS5 423 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 TRPA1O75762 1119 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 DDIT3P35638 169 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 PRCPP42785 496 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 TRIML2Q8N7C3 387 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 SH3GL3Q99963 347 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 PAGR1Q9BTK6 254 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 CD2APQ9Y5K6 639 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 CSADQ9Y600 493 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 TSPOAP1O95153 1857 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 CDC27P30260 824 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 RCN2Q14257 317 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 DTNBP1Q96EV8 351 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 ARHGEF40Q8TER5 1519 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 CDHR2Q9BYE9 1310 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 GDF11O95390 407 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 RAD54LQ92698 747 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 NACA2Q9H009 215 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 ZNF277Q9NRM2 450 aaPredicted RBP15.3■□□□□ 0.04
LMX1B-202ENST00000373474 PALLDQ8WX93 1383 aa15.29■□□□□ 0.04
LMX1B-202ENST00000373474 TULP4Q9NRJ4 1543 aa15.29■□□□□ 0.04
LMX1B-202ENST00000373474 UBN2Q6ZU65 1347 aa15.29■□□□□ 0.04
LMX1B-202ENST00000373474 SRGAP2O75044 1071 aa15.29■□□□□ 0.04
LMX1B-202ENST00000373474 ALX1Q15699 326 aa15.29■□□□□ 0.04
LMX1B-202ENST00000373474 HIBCHQ6NVY1 386 aaPredicted RBP15.29■□□□□ 0.04
LMX1B-202ENST00000373474 RHOT2Q8IXI1 618 aa15.29■□□□□ 0.04
LMX1B-202ENST00000373474 GFM2Q969S9 779 aaKnown RBP15.29■□□□□ 0.04
LMX1B-202ENST00000373474 CALR3Q96L12 384 aaKnown RBP15.29■□□□□ 0.04
LMX1B-202ENST00000373474 GNGT2O14610 69 aa15.29■□□□□ 0.04
LMX1B-202ENST00000373474 ALKBH5Q6P6C2 394 aaKnown RBP15.29■□□□□ 0.04
LMX1B-202ENST00000373474 CNKSR1Q969H4 720 aa15.29■□□□□ 0.04
LMX1B-202ENST00000373474 SLCO1A2P46721 670 aa15.29■□□□□ 0.04
LMX1B-202ENST00000373474 PRPSAP1Q14558 356 aa15.29■□□□□ 0.04
LMX1B-202ENST00000373474 ANO3Q9BYT9 981 aa15.29■□□□□ 0.04
LMX1B-202ENST00000373474 ANLNQ9NQW6 1124 aa15.29■□□□□ 0.04
LMX1B-202ENST00000373474 KSR1Q8IVT5 923 aa15.29■□□□□ 0.04
LMX1B-202ENST00000373474 GOLGA8CPA6NN73 597 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 MCF2LO15068 1137 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 TTI1O43156 1089 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 GYS2P54840 703 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 CDR2Q01850 454 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 CYP4F22Q6NT55 531 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 PXDNLA1KZ92 1463 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 KIF28PB7ZC32 967 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 MED7O43513 233 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 ATP5HO75947 161 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 CASP1P29466 404 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 MXI1P50539 228 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 ADAM21Q9UKJ8 722 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 MORC2Q9Y6X9 1032 aaPredicted RBP15.28■□□□□ 0.04
LMX1B-202ENST00000373474 ADCY1Q08828 1119 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 GRAPQ13588 217 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 GRAPLQ8TC17 118 aaPredicted RBP15.28■□□□□ 0.04
LMX1B-202ENST00000373474 SH3RF3Q8TEJ3 882 aaPredicted RBP15.28■□□□□ 0.04
LMX1B-202ENST00000373474 LRRC53A6NM62 1247 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 MYO1CO00159 1063 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 SERPINB2P05120 415 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 AP3B2Q13367 1082 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 ORC2Q13416 577 aaPredicted RBP15.28■□□□□ 0.04
LMX1B-202ENST00000373474 HLFQ16534 295 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 DNAJC24Q6P3W2 148 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 TRIM15Q9C019 465 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 E9PMD0 336 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 TLR3O15455 904 aaKnown RBP15.28■□□□□ 0.04
LMX1B-202ENST00000373474 GGCXP38435 758 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 USP14P54578 494 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 C16orf87Q6PH81 154 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 NCAPG2Q86XI2 1143 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 CEP70Q8NHQ1 597 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 ADAMTS1Q9UHI8 967 aa15.28■□□□□ 0.04
LMX1B-202ENST00000373474 ATICP31939 592 aa15.27■□□□□ 0.04
LMX1B-202ENST00000373474 SHC4Q6S5L8 630 aa15.27■□□□□ 0.04
LMX1B-202ENST00000373474 GDAP1Q8TB36 358 aa15.27■□□□□ 0.04
LMX1B-202ENST00000373474 ADGRG1Q9Y653 693 aa15.27■□□□□ 0.04
LMX1B-202ENST00000373474 CPP00450 1065 aa15.27■□□□□ 0.04
LMX1B-202ENST00000373474 FGGP02679 453 aa15.27■□□□□ 0.04
LMX1B-202ENST00000373474 EEF1B2P24534 225 aaKnown RBP15.27■□□□□ 0.04
LMX1B-202ENST00000373474 NEK2P51955 445 aa15.27■□□□□ 0.04
LMX1B-202ENST00000373474 RWDD2BP57060 319 aa15.27■□□□□ 0.04
LMX1B-202ENST00000373474 NLGN1Q8N2Q7 840 aa15.27■□□□□ 0.04
LMX1B-202ENST00000373474 PIP4K2CQ8TBX8 421 aa15.27■□□□□ 0.04
LMX1B-202ENST00000373474 DCAF4Q8WV16 495 aa15.27■□□□□ 0.04
LMX1B-202ENST00000373474 CEP170P1Q96L14 293 aa15.27■□□□□ 0.04
LMX1B-202ENST00000373474 OLFM3Q96PB7 478 aa15.27■□□□□ 0.04
LMX1B-202ENST00000373474 PI4KBQ9UBF8 816 aa15.27■□□□□ 0.04
LMX1B-202ENST00000373474 CEP152O94986 1710 aa15.27■□□□□ 0.04
LMX1B-202ENST00000373474 PVALEFA0A1B0GWK0 134 aa15.27■□□□□ 0.03
LMX1B-202ENST00000373474 GRID2IPA4D2P6 1211 aa15.27■□□□□ 0.03
LMX1B-202ENST00000373474 PODXLO00592 558 aa15.27■□□□□ 0.03
LMX1B-202ENST00000373474 PYGBP11216 843 aa15.27■□□□□ 0.03
LMX1B-202ENST00000373474 CTTNQ14247 550 aaKnown RBP15.27■□□□□ 0.03
LMX1B-202ENST00000373474 ENAHQ8N8S7 591 aaPredicted RBP15.27■□□□□ 0.03
LMX1B-202ENST00000373474 HDAC11Q96DB2 347 aa15.27■□□□□ 0.03
LMX1B-202ENST00000373474 RNF207Q6ZRF8 634 aa15.27■□□□□ 0.03
LMX1B-202ENST00000373474 SLC7A3Q8WY07 619 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms