RNA–Protein interactions for RNA: ENST00000372317.7

CALCOCO2-202, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 462 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-202ENST00000372317 RBM43Q6ZSC3 357 aaKnown RBP12.86□□□□□ -0.35
CALCOCO2-202ENST00000372317 C4orf19Q8IY42 314 aa12.86□□□□□ -0.35
CALCOCO2-202ENST00000372317 SEPT1Q8WYJ6 367 aa12.86□□□□□ -0.35
CALCOCO2-202ENST00000372317 CCDC34Q96HJ3 373 aa12.86□□□□□ -0.35
CALCOCO2-202ENST00000372317 BLZF1Q9H2G9 400 aa12.86□□□□□ -0.35
CALCOCO2-202ENST00000372317 BHMT2Q9H2M3 363 aa12.86□□□□□ -0.35
CALCOCO2-202ENST00000372317 KBTBD4Q9NVX7 518 aa12.86□□□□□ -0.35
CALCOCO2-202ENST00000372317 HOOK1Q9UJC3 728 aaKnown RBP12.86□□□□□ -0.35
CALCOCO2-202ENST00000372317 ZBTB39O15060 712 aa12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 SEPT4O43236 478 aa12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 DYNC1LI2O43237 492 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 GTPBP6O43824 516 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 EYA4O95677 639 aa12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 LGALS2P05162 132 aa12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 HOXD8P13378 290 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 YWHABP31946 246 aaKnown RBP12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 GRK4P32298 578 aa12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 MDM2Q00987 491 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 CUL4BQ13620 913 aa12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 SV2BQ7L1I2 683 aa12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 TRMT1LQ7Z2T5 733 aaKnown RBP12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 GPBP1Q86WP2 473 aa12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 KCTD17Q8N5Z5 321 aa12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 AFAP1L1Q8TED9 768 aa12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 CCDC43Q96MW1 224 aaKnown RBP12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 NACC1Q96RE7 527 aa12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 RUSC1Q9BVN2 902 aa12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 AZI2Q9H6S1 392 aa12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 SEPT9Q9UHD8 586 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 DNM3Q9UQ16 869 aa12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 MAFBQ9Y5Q3 323 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 SYNRGQ9UMZ2 1314 aa12.85□□□□□ -0.35
CALCOCO2-202ENST00000372317 ARHGEF35A5YM69 484 aa12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 MYMKA6NI61 221 aa12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 DKC1O60832 514 aaKnown RBP eCLIP12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 DUSP11O75319 330 aaKnown RBP12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 STBD1O95210 358 aa12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 OATP04181 439 aa12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 MARK3P27448 753 aa12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 STAT5BP51692 787 aa12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 SLC12A3P55017 1021 aa12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 IRX5P78411 483 aaPredicted RBP12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 DPYDQ12882 1025 aa12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 ANO5Q75V66 913 aa12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 ELOA2Q8IYF1 753 aaPredicted RBP12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 SH3TC2Q8TF17 1288 aa12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 GLG1Q92896 1179 aa12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 TRIM9Q9C026 710 aa12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 AP5M1Q9H0R1 490 aa12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 PTPN22Q9Y2R2 807 aa12.84□□□□□ -0.35
CALCOCO2-202ENST00000372317 ARID2Q68CP9 1835 aa12.83□□□□□ -0.35
CALCOCO2-202ENST00000372317 MYADML2A6NDP7 307 aa12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 RARBP10826 455 aa12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 CYP11B2P19099 503 aa12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 ATP4AP20648 1035 aa12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 CTCFP49711 727 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 RARRES1P49788 294 aa12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 LBX1P52954 281 aa12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 ASIC1P78348 528 aa12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 BEX3Q00994 111 aa12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 FSCN1Q16658 493 aaKnown RBP12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 XKR3Q5GH77 459 aa12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 SYT2Q8N9I0 419 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 SMARCE1Q969G3 411 aa12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 FAM167AQ96KS9 214 aa12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 SH2D3AQ9BRG2 576 aa12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 UPF3AQ9H1J1 476 aaKnown RBP12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 ANKEF1Q9NU02 776 aa12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 KIAA1468Q9P260 1216 aa12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 DDX20Q9UHI6 824 aaKnown RBP12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 DBR1Q9UK59 544 aaKnown RBP12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 Q9Y3F1 56 aa12.83□□□□□ -0.36
CALCOCO2-202ENST00000372317 NPHP3-ACAD11A0A0J9YXS1 232 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 A6NJR5 290 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 BIN1O00499 593 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 USO1O60763 962 aaKnown RBP12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 SMC2O95347 1197 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 PGK1P00558 417 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 KRT18P05783 430 aaKnown RBP12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 MYL1P05976 194 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 C6orf222P0C671 652 aaPredicted RBP12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 CPT1AP50416 773 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 NPEPPSP55786 919 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 AMPD3Q01432 767 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 PLCB4Q15147 1175 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 DGKDQ16760 1214 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 XKR9Q5GH70 373 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 PADI6Q6TGC4 694 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 DYMQ7RTS9 669 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 CTU1Q7Z7A3 348 aaKnown RBP12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 ATP8B4Q8TF62 1192 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 DDX12PQ92771 950 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 C7orf25Q9BPX7 421 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 C16orf70Q9BSU1 422 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 SMARCAD1Q9H4L7 1026 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 XPNPEP3Q9NQH7 507 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 BMP2KQ9NSY1 1161 aaPredicted RBP12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 TUBE1Q9UJT0 475 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 MAN1B1Q9UKM7 699 aa12.82□□□□□ -0.36
CALCOCO2-202ENST00000372317 ZNF215Q9UL58 517 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms