RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 MKRN3Q13064 507 aaKnown RBP14.38□□□□□ -0.11
LDB3-203ENST00000372056 NEDD9Q14511 834 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 B3GNT9Q6UX72 402 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 NACC1Q96RE7 527 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 PANK4Q9NVE7 773 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 SRCAPQ6ZRS2 3230 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 RASSF10A6NK89 507 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 LGALS16A8MUM7 142 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 FAM155AB1AL88 458 aaPredicted RBP14.38□□□□□ -0.11
LDB3-203ENST00000372056 WDR64B1ANS9 1081 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 AKR1B15C9JRZ8 316 aaPredicted RBP14.38□□□□□ -0.11
LDB3-203ENST00000372056 EML1O00423 815 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 P4HBP07237 508 aaKnown RBP14.38□□□□□ -0.11
LDB3-203ENST00000372056 ARP10275 920 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 PSMC6P62333 389 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 ARSHQ5FYA8 562 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 WDR78Q5VTH9 848 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 NYAP1Q6ZVC0 841 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 PLEKHH3Q7Z736 793 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 PPFIBP1Q86W92 1011 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 PRIMPOLQ96LW4 560 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 PANX2Q96RD6 677 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 BAG1Q99933 345 aaPredicted RBP14.38□□□□□ -0.11
LDB3-203ENST00000372056 HSD17B14Q9BPX1 270 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 EIF2AK1Q9BQI3 630 aaKnown RBP14.38□□□□□ -0.11
LDB3-203ENST00000372056 TRMT1Q9NXH9 659 aaKnown RBP14.38□□□□□ -0.11
LDB3-203ENST00000372056 MAGEC2Q9UBF1 373 aaPredicted RBP14.38□□□□□ -0.11
LDB3-203ENST00000372056 FRMD3A2A2Y4 597 aa14.37□□□□□ -0.11
LDB3-203ENST00000372056 ARHGAP6O43182 974 aa14.37□□□□□ -0.11
LDB3-203ENST00000372056 GYPCP04921 128 aa14.37□□□□□ -0.11
LDB3-203ENST00000372056 RBL2Q08999 1139 aa14.37□□□□□ -0.11
LDB3-203ENST00000372056 DEFB115Q30KQ5 88 aa14.37□□□□□ -0.11
LDB3-203ENST00000372056 FAM26FQ5R3K3 315 aa14.37□□□□□ -0.11
LDB3-203ENST00000372056 CEP135Q66GS9 1140 aa14.37□□□□□ -0.11
LDB3-203ENST00000372056 FOXR2Q6PJQ5 311 aa14.37□□□□□ -0.11
LDB3-203ENST00000372056 MIER3Q7Z3K6 550 aa14.37□□□□□ -0.11
LDB3-203ENST00000372056 FAM114A1Q8IWE2 563 aa14.37□□□□□ -0.11
LDB3-203ENST00000372056 CCDC65Q8IXS2 484 aa14.37□□□□□ -0.11
LDB3-203ENST00000372056 SYT2Q8N9I0 419 aaPredicted RBP14.37□□□□□ -0.11
LDB3-203ENST00000372056 GLIS3Q8NEA6 775 aa14.37□□□□□ -0.11
LDB3-203ENST00000372056 PCDHA2Q9Y5H9 948 aa14.37□□□□□ -0.11
LDB3-203ENST00000372056 NPHP3-ACAD11A0A0J9YXS1 232 aa14.36□□□□□ -0.11
LDB3-203ENST00000372056 CA12O43570 354 aa14.36□□□□□ -0.11
LDB3-203ENST00000372056 STX10O60499 249 aa14.36□□□□□ -0.11
LDB3-203ENST00000372056 LYPLA2O95372 231 aa14.36□□□□□ -0.11
LDB3-203ENST00000372056 TNNT1P13805 278 aa14.36□□□□□ -0.11
LDB3-203ENST00000372056 YY1P25490 414 aa14.36□□□□□ -0.11
LDB3-203ENST00000372056 APLP1P51693 650 aa14.36□□□□□ -0.11
LDB3-203ENST00000372056 CYP4A11Q02928 519 aa14.36□□□□□ -0.11
LDB3-203ENST00000372056 LRRC63Q05C16 580 aa14.36□□□□□ -0.11
LDB3-203ENST00000372056 CREBRFQ8IUR6 639 aa14.36□□□□□ -0.11
LDB3-203ENST00000372056 IL31RAQ8NI17 732 aa14.36□□□□□ -0.11
LDB3-203ENST00000372056 PPP1R13BQ96KQ4 1090 aa14.36□□□□□ -0.11
LDB3-203ENST00000372056 CNOT6LQ96LI5 555 aaKnown RBP14.36□□□□□ -0.11
LDB3-203ENST00000372056 ZSWIM4Q9H7M6 989 aa14.36□□□□□ -0.11
LDB3-203ENST00000372056 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.36□□□□□ -0.11
LDB3-203ENST00000372056 LOXHD1Q8IVV2 1947 aa14.36□□□□□ -0.11
LDB3-203ENST00000372056 ADGRA2Q96PE1 1338 aa14.36□□□□□ -0.11
LDB3-203ENST00000372056 SOWAHBA6NEL2 793 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 DHX15O43143 795 aaKnown RBP14.35□□□□□ -0.11
LDB3-203ENST00000372056 MFAP3LO75121 409 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 KIF20AO95235 890 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 UBXN1Q04323 297 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 GRB14Q14449 540 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 C17orf99Q6UX52 265 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 MAMDC4Q6UXC1 1216 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 GPR142Q7Z601 462 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 MYOCDQ8IZQ8 938 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 ZNF507Q8TCN5 953 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 EEF2KMTQ96G04 330 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 ZFP91Q96JP5 570 aaPredicted RBP14.35□□□□□ -0.11
LDB3-203ENST00000372056 TUBGCP2Q9BSJ2 902 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 TIPINQ9BVW5 301 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 VTA1Q9NP79 307 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 RGL1Q9NZL6 768 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 PCDHA10Q9Y5I2 948 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 A0A1W2PQC6 194 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 EYA4O95677 639 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 PSAPP07602 524 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 CASP14P31944 242 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 MAP2K2P36507 400 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 CNTN2Q02246 1040 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 TRIM14Q14142 442 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 LRRC41Q15345 812 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 PTPN14Q15678 1187 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 ZNF792Q3KQV3 632 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 ZCWPW2Q504Y3 356 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 DPP9Q86TI2 863 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 CNGA4Q8IV77 575 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 SOCS4Q8WXH5 440 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 ATP6V0A1Q93050 837 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 ZNF236Q9UL36 1845 aa14.35□□□□□ -0.11
LDB3-203ENST00000372056 SYNGAP1Q96PV0 1343 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 IGF2BP3O00425 579 aaKnown RBP eCLIP14.34□□□□□ -0.11
LDB3-203ENST00000372056 CHMP2AO43633 222 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 SLITRK3O94933 977 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 KRT18P05783 430 aaKnown RBP14.34□□□□□ -0.11
LDB3-203ENST00000372056 HOXC6P09630 235 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 ADORA2AP29274 412 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 QARSP47897 775 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms