RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 OPA1O60313 960 aa12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 IPO7O95373 1038 aaKnown RBP12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 RPN1P04843 607 aaKnown RBP12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 ICAM1P05362 532 aa12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 EPB41P11171 864 aaKnown RBP12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 ERCC3P19447 782 aa12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 PSMC4P43686 418 aa12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 LACTBP83111 547 aaPredicted RBP12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 UBXN1Q04323 297 aa12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 KIF22Q14807 665 aa12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 CCDC122Q5T0U0 273 aa12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 WWC2Q6AWC2 1192 aa12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 PACS2Q86VP3 889 aa12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 SPATS2Q86XZ4 545 aaKnown RBP12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 SPZ1Q9BXG8 430 aa12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 VPS16Q9H269 839 aa12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 GEMIN8Q9NWZ8 242 aaKnown RBP12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 TAB2Q9NYJ8 693 aa12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 SEC63Q9UGP8 760 aaKnown RBP12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 GUCA1BQ9UMX6 200 aa12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 A0A1W2PQJ5 194 aa12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 ATP2A1O14983 1001 aa12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 SMARCA1P28370 1054 aa12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 TNFRSF8P28908 595 aa12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 CTGFP29279 349 aa12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 USP8P40818 1118 aa12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 OAZ1P54368 228 aa12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 FBXO11Q86XK2 927 aa12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 POTEDQ86YR6 584 aa12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 RIOX2Q8IUF8 465 aa12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 ADSSL1Q8N142 457 aa12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 AENQ8WTP8 325 aaKnown RBP12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 JAKMIP2Q96AA8 810 aa12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 CEP89Q96ST8 783 aa12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 MMS19Q96T76 1030 aa12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 MAGEF1Q9HAY2 307 aa12.64□□□□□ -0.39
TSPAN1-201ENST00000372003 PNMA6FA0A0J9YX94 578 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 TTC26A0AVF1 554 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 RNF225M0QZC1 329 aaPredicted RBP12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 TNPO2O14787 897 aaKnown RBP12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 PPP1R11O60927 126 aaPredicted RBP12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 SLC25A27O95847 323 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 ABL1P00519 1130 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 ATP1A1P05023 1023 aaKnown RBP12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 ATP2B1P20020 1258 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 CAP1Q01518 475 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 APBA1Q02410 837 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 ALS2CLQ60I27 953 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 FOXR1Q6PIV2 292 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 MMS22LQ6ZRQ5 1243 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 KIAA1328Q86T90 577 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 FAM114A1Q8IWE2 563 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 CCDC155Q8N6L0 562 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 COA7Q96BR5 231 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 MTMR8Q96EF0 704 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 DHTKD1Q96HY7 919 aaPredicted RBP12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 CHP1Q99653 195 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 SH3GL2Q99962 352 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 SELENOOQ9BVL4 669 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 AMNQ9BXJ7 453 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 DEF6Q9H4E7 631 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 MAGEC2Q9UBF1 373 aaPredicted RBP12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 PCDHA1Q9Y5I3 950 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 CNTNAP5Q8WYK1 1306 aa12.63□□□□□ -0.39
TSPAN1-201ENST00000372003 GOLGA6CA6NDK9 693 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 GOLGA6BA6NDN3 693 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 EBAG9O00559 213 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 PHACTR2O75167 634 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 GOLGA6DP0CG33 693 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 MAPK4P31152 587 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 FCGRTP55899 365 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 SKOR1P84550 965 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 ZBED6P86452 979 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 PTGDRQ13258 359 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 NNTQ13423 1086 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 GPR142Q7Z601 462 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 SMYD4Q8IYR2 804 aaPredicted RBP12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 TRIM58Q8NG06 486 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 TRIM47Q96LD4 638 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 CUEDC2Q9H467 287 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 MROH8Q9H579 483 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 RNF146Q9NTX7 359 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 GOLGA6AQ9NYA3 693 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 VPS54Q9P1Q0 977 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 AGPSO00116 658 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 PSMA7O14818 248 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 GGCXP38435 758 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 IRAK1P51617 712 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 VAV2P52735 878 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 NPY5RQ15761 445 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 GLE1Q53GS7 698 aaKnown RBP12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 EMBQ6PCB8 327 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 WDR59Q6PJI9 974 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 HEATR3Q7Z4Q2 680 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 PLEKHH3Q7Z736 793 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 IRF2BP1Q8IU81 584 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 SHCBP1Q8NEM2 672 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 GPKOWQ92917 476 aaPredicted RBP eCLIP12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 SHISA4Q96DD7 197 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 TTYH3Q9C0H2 523 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms