RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 M0QZ92 97 aa17.24■□□□□ 0.35
RPF1-202ENST00000370656 PIK3CDO00329 1044 aa17.24■□□□□ 0.35
RPF1-202ENST00000370656 LINC01565O15544 149 aa17.24■□□□□ 0.35
RPF1-202ENST00000370656 EYA4O95677 639 aa17.24■□□□□ 0.35
RPF1-202ENST00000370656 MRPS6P82932 125 aaKnown RBP17.24■□□□□ 0.35
RPF1-202ENST00000370656 USP17L6PQ6QN14 398 aa17.24■□□□□ 0.35
RPF1-202ENST00000370656 NPAS4Q8IUM7 802 aa17.24■□□□□ 0.35
RPF1-202ENST00000370656 SUGP1Q8IWZ8 645 aaKnown RBP17.24■□□□□ 0.35
RPF1-202ENST00000370656 EFHBQ8N7U6 833 aa17.24■□□□□ 0.35
RPF1-202ENST00000370656 RRP36Q96EU6 259 aaKnown RBP17.24■□□□□ 0.35
RPF1-202ENST00000370656 SQORQ9Y6N5 450 aa17.24■□□□□ 0.35
RPF1-202ENST00000370656 RRN3P2A6NIE6 340 aa17.23■□□□□ 0.35
RPF1-202ENST00000370656 MARK3P27448 753 aa17.23■□□□□ 0.35
RPF1-202ENST00000370656 KIF5BP33176 963 aa17.23■□□□□ 0.35
RPF1-202ENST00000370656 PTPN5P54829 565 aa17.23■□□□□ 0.35
RPF1-202ENST00000370656 ADCK5Q3MIX3 580 aa17.23■□□□□ 0.35
RPF1-202ENST00000370656 TRIM67Q6ZTA4 783 aa17.23■□□□□ 0.35
RPF1-202ENST00000370656 NCOA7Q8NI08 942 aa17.23■□□□□ 0.35
RPF1-202ENST00000370656 PBXIP1Q96AQ6 731 aa17.23■□□□□ 0.35
RPF1-202ENST00000370656 MSLNLQ96KJ4 702 aa17.23■□□□□ 0.35
RPF1-202ENST00000370656 SPZ1Q9BXG8 430 aa17.23■□□□□ 0.35
RPF1-202ENST00000370656 DAXXQ9UER7 740 aaPredicted RBP17.23■□□□□ 0.35
RPF1-202ENST00000370656 TELO2Q9Y4R8 837 aa17.23■□□□□ 0.35
RPF1-202ENST00000370656 MRPL42Q9Y6G3 142 aaKnown RBP17.23■□□□□ 0.35
RPF1-202ENST00000370656 TMEM221A6NGB7 291 aa17.22■□□□□ 0.35
RPF1-202ENST00000370656 M0R296 226 aa17.22■□□□□ 0.35
RPF1-202ENST00000370656 ITGB1P05556 798 aa17.22■□□□□ 0.35
RPF1-202ENST00000370656 CD52P31358 61 aa17.22■□□□□ 0.35
RPF1-202ENST00000370656 IGBP1P78318 339 aa17.22■□□□□ 0.35
RPF1-202ENST00000370656 COASYQ13057 564 aa17.22■□□□□ 0.35
RPF1-202ENST00000370656 CAMK1Q14012 370 aa17.22■□□□□ 0.35
RPF1-202ENST00000370656 RUFY3Q7L099 469 aa17.22■□□□□ 0.35
RPF1-202ENST00000370656 SMRP1Q8NCR6 262 aa17.22■□□□□ 0.35
RPF1-202ENST00000370656 CTCFLQ8NI51 663 aaPredicted RBP17.22■□□□□ 0.35
RPF1-202ENST00000370656 SPPL3Q8TCT6 385 aa17.22■□□□□ 0.35
RPF1-202ENST00000370656 MAP3K14Q99558 947 aa17.22■□□□□ 0.35
RPF1-202ENST00000370656 LRFN2Q9ULH4 789 aa17.22■□□□□ 0.35
RPF1-202ENST00000370656 TAF6LQ9Y6J9 622 aa17.22■□□□□ 0.35
RPF1-202ENST00000370656 USP34Q70CQ2 3546 aa17.22■□□□□ 0.35
RPF1-202ENST00000370656 GSTTP1A0A1W2PQM5 241 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 FSD2A1L4K1 749 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 MEIS2O14770 477 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 MAFGO15525 162 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 KCNA2P16389 499 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 SMARCA1P28370 1054 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 NRIP1P48552 1158 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 MTMR1Q13613 665 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 MARCH8Q5T0T0 291 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 FAM43BQ6ZT52 329 aaPredicted RBP17.21■□□□□ 0.35
RPF1-202ENST00000370656 FBXL16Q8N461 479 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 KLHL23Q8NBE8 558 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 POF1BQ8WVV4 589 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 LZTS2Q9BRK4 669 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 FAM49AQ9H0Q0 323 aaPredicted RBP17.21■□□□□ 0.35
RPF1-202ENST00000370656 AZI2Q9H6S1 392 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 AGO3Q9H9G7 860 aaKnown RBP17.21■□□□□ 0.35
RPF1-202ENST00000370656 SENP2Q9HC62 589 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 TRPV2Q9Y5S1 764 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 CYP46A1Q9Y6A2 500 aa17.21■□□□□ 0.35
RPF1-202ENST00000370656 ZDBF2Q9HCK1 2354 aa17.21■□□□□ 0.34
RPF1-202ENST00000370656 KMT2EQ8IZD2 1858 aa17.2■□□□□ 0.34
RPF1-202ENST00000370656 PLXNA4Q9HCM2 1894 aa17.2■□□□□ 0.34
RPF1-202ENST00000370656 LOC730098B7Z3J9 87 aa17.2■□□□□ 0.34
RPF1-202ENST00000370656 ATP9AO75110 1047 aa17.2■□□□□ 0.34
RPF1-202ENST00000370656 HMGB1P09429 215 aaKnown RBP17.2■□□□□ 0.34
RPF1-202ENST00000370656 SCG2P13521 617 aa17.2■□□□□ 0.34
RPF1-202ENST00000370656 GNAQP50148 359 aa17.2■□□□□ 0.34
RPF1-202ENST00000370656 ZXDAP98168 799 aa17.2■□□□□ 0.34
RPF1-202ENST00000370656 PAK2Q13177 524 aa17.2■□□□□ 0.34
RPF1-202ENST00000370656 CUL4AQ13619 759 aa17.2■□□□□ 0.34
RPF1-202ENST00000370656 PAN2Q504Q3 1202 aaKnown RBP17.2■□□□□ 0.34
RPF1-202ENST00000370656 PRSS33Q8NF86 280 aa17.2■□□□□ 0.34
RPF1-202ENST00000370656 JAKMIP1Q96N16 626 aaKnown RBP17.2■□□□□ 0.34
RPF1-202ENST00000370656 PSTPIP2Q9H939 334 aa17.2■□□□□ 0.34
RPF1-202ENST00000370656 AAASQ9NRG9 546 aa17.2■□□□□ 0.34
RPF1-202ENST00000370656 CLEC1BQ9P126 229 aa17.2■□□□□ 0.34
RPF1-202ENST00000370656 SPDYE3A6NKU9 549 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 E7EWF7 191 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 INSRRP14616 1297 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 ITGB5P18084 799 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 RPS6KB1P23443 525 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 DNAJB1P25685 340 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 DDIT3P35638 169 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 ADGRD2Q7Z7M1 963 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 RBM23Q86U06 439 aaKnown RBP17.19■□□□□ 0.34
RPF1-202ENST00000370656 CRIPAKQ8N1N5 446 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 MICAL1Q8TDZ2 1067 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 LINC01599Q8WXQ3 324 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 NEK1Q96PY6 1258 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 PHF7Q9BWX1 381 aaPredicted RBP17.19■□□□□ 0.34
RPF1-202ENST00000370656 TLE6Q9H808 572 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 PKD2L1Q9P0L9 805 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 PADI3Q9ULW8 664 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 TRPC6Q9Y210 931 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 PCDHB12Q9Y5F1 795 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 IGSF9BQ9UPX0 1349 aa17.19■□□□□ 0.34
RPF1-202ENST00000370656 DDAH1O94760 285 aa17.18■□□□□ 0.34
RPF1-202ENST00000370656 EXOSC10Q01780 885 aaKnown RBP17.18■□□□□ 0.34
RPF1-202ENST00000370656 UBE3AQ05086 875 aa17.18■□□□□ 0.34
RPF1-202ENST00000370656 CBX2Q14781 532 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms