RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 PLCB4Q15147 1175 aa18.35■□□□□ 0.53
VMA21-202ENST00000370361 EPC2Q52LR7 807 aa18.35■□□□□ 0.53
VMA21-202ENST00000370361 ZNF746Q6NUN9 644 aaPredicted RBP18.35■□□□□ 0.53
VMA21-202ENST00000370361 ZNF710Q8N1W2 664 aa18.35■□□□□ 0.53
VMA21-202ENST00000370361 FIBCD1Q8N539 461 aa18.35■□□□□ 0.53
VMA21-202ENST00000370361 C22orf23Q9BZE7 217 aa18.35■□□□□ 0.53
VMA21-202ENST00000370361 SH3GLB2Q9NR46 395 aa18.35■□□□□ 0.53
VMA21-202ENST00000370361 TRPV2Q9Y5S1 764 aa18.35■□□□□ 0.53
VMA21-202ENST00000370361 C5orf67F2Z3F1 127 aa18.34■□□□□ 0.53
VMA21-202ENST00000370361 IPO5O00410 1097 aaKnown RBP18.34■□□□□ 0.53
VMA21-202ENST00000370361 BACH1O14867 736 aa18.34■□□□□ 0.53
VMA21-202ENST00000370361 IFNAR1P17181 557 aa18.34■□□□□ 0.53
VMA21-202ENST00000370361 IGBP1P78318 339 aa18.34■□□□□ 0.53
VMA21-202ENST00000370361 KRT76Q01546 638 aa18.34■□□□□ 0.53
VMA21-202ENST00000370361 KRT40Q6A162 431 aa18.34■□□□□ 0.53
VMA21-202ENST00000370361 ABHD15Q6UXT9 468 aa18.34■□□□□ 0.53
VMA21-202ENST00000370361 ATP8B4Q8TF62 1192 aa18.34■□□□□ 0.53
VMA21-202ENST00000370361 PGBD1Q96JS3 809 aa18.34■□□□□ 0.53
VMA21-202ENST00000370361 C17orf80Q9BSJ5 609 aa18.34■□□□□ 0.53
VMA21-202ENST00000370361 LMAN2LQ9H0V9 348 aa18.34■□□□□ 0.53
VMA21-202ENST00000370361 ADGRA3Q8IWK6 1321 aa18.33■□□□□ 0.53
VMA21-202ENST00000370361 IGSF9BQ9UPX0 1349 aa18.33■□□□□ 0.53
VMA21-202ENST00000370361 IGLV3-22A0A075B6J6 115 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 FAM86B1E9PN63 330 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 NCK2O43639 380 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 UPP2O95045 317 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 FAM86B2P0C5J1 330 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 CIITAP33076 1130 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 TFF2Q03403 129 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 PUS10Q3MIT2 529 aaKnown RBP18.33■□□□□ 0.52
VMA21-202ENST00000370361 ZNF484Q5JVG2 852 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 JAKMIP3Q5VZ66 844 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 SPRED2Q7Z698 418 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 TMEM192Q8IY95 271 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 TRIM22Q8IYM9 498 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 ZNF577Q9BSK1 485 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 C11orf84Q9BUA3 381 aaPredicted RBP18.33■□□□□ 0.52
VMA21-202ENST00000370361 PLVAPQ9BX97 442 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 TMEM260Q9NX78 707 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 PPP4R2Q9NY27 417 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 CEP131Q9UPN4 1083 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 TTC3P53804 2025 aa18.33■□□□□ 0.52
VMA21-202ENST00000370361 REV3LO60673 3130 aa18.32■□□□□ 0.52
VMA21-202ENST00000370361 XIRP2A4UGR9 3374 aa18.32■□□□□ 0.52
VMA21-202ENST00000370361 ENPP3O14638 875 aa18.32■□□□□ 0.52
VMA21-202ENST00000370361 STAG3L1P0CL83 205 aa18.32■□□□□ 0.52
VMA21-202ENST00000370361 PKN1Q16512 942 aa18.32■□□□□ 0.52
VMA21-202ENST00000370361 PDXDC2PQ6P474 469 aa18.32■□□□□ 0.52
VMA21-202ENST00000370361 MTHFD1LQ6UB35 978 aa18.32■□□□□ 0.52
VMA21-202ENST00000370361 BBXQ8WY36 941 aaPredicted RBP18.32■□□□□ 0.52
VMA21-202ENST00000370361 CLP1Q92989 425 aaKnown RBP18.32■□□□□ 0.52
VMA21-202ENST00000370361 FAM167AQ96KS9 214 aa18.32■□□□□ 0.52
VMA21-202ENST00000370361 CELF4Q9BZC1 486 aaKnown RBP18.32■□□□□ 0.52
VMA21-202ENST00000370361 FAM49AQ9H0Q0 323 aaPredicted RBP18.32■□□□□ 0.52
VMA21-202ENST00000370361 ZNF302Q9NR11 478 aa18.32■□□□□ 0.52
VMA21-202ENST00000370361 NLRC5Q86WI3 1866 aa18.32■□□□□ 0.52
VMA21-202ENST00000370361 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.31■□□□□ 0.52
VMA21-202ENST00000370361 CCNE2O96020 404 aa18.31■□□□□ 0.52
VMA21-202ENST00000370361 USP11P51784 963 aa18.31■□□□□ 0.52
VMA21-202ENST00000370361 PAK2Q13177 524 aa18.31■□□□□ 0.52
VMA21-202ENST00000370361 GPM6BQ13491 265 aa18.31■□□□□ 0.52
VMA21-202ENST00000370361 NTRK3Q16288 839 aa18.31■□□□□ 0.52
VMA21-202ENST00000370361 NAALADL2Q58DX5 795 aa18.31■□□□□ 0.52
VMA21-202ENST00000370361 CPLX2Q6PUV4 134 aaKnown RBP18.31■□□□□ 0.52
VMA21-202ENST00000370361 RUFY3Q7L099 469 aa18.31■□□□□ 0.52
VMA21-202ENST00000370361 NPAS4Q8IUM7 802 aa18.31■□□□□ 0.52
VMA21-202ENST00000370361 OSBPL7Q9BZF2 842 aa18.31■□□□□ 0.52
VMA21-202ENST00000370361 TM6SF1Q9BZW5 370 aa18.31■□□□□ 0.52
VMA21-202ENST00000370361 UBE2ZQ9H832 354 aaPredicted RBP18.31■□□□□ 0.52
VMA21-202ENST00000370361 RC3H2Q9HBD1 1191 aaKnown RBP18.31■□□□□ 0.52
VMA21-202ENST00000370361 DHX15O43143 795 aaKnown RBP18.3■□□□□ 0.52
VMA21-202ENST00000370361 PSAPP07602 524 aa18.3■□□□□ 0.52
VMA21-202ENST00000370361 PDIA3P30101 505 aaKnown RBP18.3■□□□□ 0.52
VMA21-202ENST00000370361 BMPR1AP36894 532 aa18.3■□□□□ 0.52
VMA21-202ENST00000370361 KCNQ1P51787 676 aa18.3■□□□□ 0.52
VMA21-202ENST00000370361 LEXMQ3ZCV2 418 aa18.3■□□□□ 0.52
VMA21-202ENST00000370361 GALNT17Q6IS24 598 aa18.3■□□□□ 0.52
VMA21-202ENST00000370361 CMTR2Q8IYT2 770 aaKnown RBP18.3■□□□□ 0.52
VMA21-202ENST00000370361 BANK1Q8NDB2 785 aa18.3■□□□□ 0.52
VMA21-202ENST00000370361 ZNF689Q96CS4 500 aaPredicted RBP18.3■□□□□ 0.52
VMA21-202ENST00000370361 ZNF274Q96GC6 653 aaPredicted RBP18.3■□□□□ 0.52
VMA21-202ENST00000370361 C1QTNF1Q9BXJ1 281 aa18.3■□□□□ 0.52
VMA21-202ENST00000370361 NSUN3Q9H649 340 aaKnown RBP18.3■□□□□ 0.52
VMA21-202ENST00000370361 ZSWIM6Q9HCJ5 1215 aa18.3■□□□□ 0.52
VMA21-202ENST00000370361 FAM50BQ9Y247 325 aa18.3■□□□□ 0.52
VMA21-202ENST00000370361 PCDHA10Q9Y5I2 948 aa18.3■□□□□ 0.52
VMA21-202ENST00000370361 MAFBQ9Y5Q3 323 aaPredicted RBP18.3■□□□□ 0.52
VMA21-202ENST00000370361 CYP46A1Q9Y6A2 500 aa18.3■□□□□ 0.52
VMA21-202ENST00000370361 MAGEB2O15479 319 aa18.29■□□□□ 0.52
VMA21-202ENST00000370361 DGKIO75912 1065 aa18.29■□□□□ 0.52
VMA21-202ENST00000370361 CPA1P15085 419 aa18.29■□□□□ 0.52
VMA21-202ENST00000370361 KLRC1P26715 233 aa18.29■□□□□ 0.52
VMA21-202ENST00000370361 CD52P31358 61 aa18.29■□□□□ 0.52
VMA21-202ENST00000370361 CTNNB1P35222 781 aa18.29■□□□□ 0.52
VMA21-202ENST00000370361 BTG3Q14201 252 aaPredicted RBP18.29■□□□□ 0.52
VMA21-202ENST00000370361 CCDC60Q8IWA6 550 aaPredicted RBP18.29■□□□□ 0.52
VMA21-202ENST00000370361 RIT2Q99578 217 aa18.29■□□□□ 0.52
VMA21-202ENST00000370361 SLC26A6Q9BXS9 759 aa18.29■□□□□ 0.52
VMA21-202ENST00000370361 AGO3Q9H9G7 860 aaKnown RBP18.29■□□□□ 0.52
VMA21-202ENST00000370361 PADI3Q9ULW8 664 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms