RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 TNPO1Q92973 898 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 IL17RAQ96F46 866 aa15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 TGS1Q96RS0 853 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 LARP6Q9BRS8 491 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 TBC1D22BQ9NU19 505 aa15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 LMCD1Q9NZU5 365 aa15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 THEGQ9P2T0 379 aa15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 SQORQ9Y6N5 450 aa15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 SMIM35A0A1B0GVV1 85 aa15.53■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ZBTB42B2RXF5 422 aa15.53■□□□□ 0.08
TNFRSF1A-202ENST00000366159 USP11P51784 963 aa15.53■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ZNF746Q6NUN9 644 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-202ENST00000366159 MTHFD1LQ6UB35 978 aa15.53■□□□□ 0.08
TNFRSF1A-202ENST00000366159 CRIPAKQ8N1N5 446 aa15.53■□□□□ 0.08
TNFRSF1A-202ENST00000366159 TRAPPC12Q8WVT3 735 aa15.53■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ASB2Q96Q27 587 aa15.53■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ZNF577Q9BSK1 485 aa15.53■□□□□ 0.08
TNFRSF1A-202ENST00000366159 AGO3Q9H9G7 860 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-202ENST00000366159 TRPC6Q9Y210 931 aa15.53■□□□□ 0.08
TNFRSF1A-202ENST00000366159 MAFBQ9Y5Q3 323 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-202ENST00000366159 CDY2AQ9Y6F7 541 aa15.53■□□□□ 0.08
TNFRSF1A-202ENST00000366159 KDM3AQ9Y4C1 1321 aa15.53■□□□□ 0.08
TNFRSF1A-202ENST00000366159 DDX39AO00148 427 aaKnown RBP15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ENPP3O14638 875 aa15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 GTPBP6O43824 516 aaPredicted RBP15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 HBP1O60381 514 aa15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 MRPS6P82932 125 aaKnown RBP15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 SSRP1Q08945 709 aaKnown RBP15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 PRR16Q569H4 304 aa15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 SWSAP1Q6NVH7 229 aa15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 TSHZ1Q6ZSZ6 1077 aa15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 FAM177A1Q8N128 213 aaPredicted RBP15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 NME8Q8N427 588 aa15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ATP8B4Q8TF62 1192 aa15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 SYMPKQ92797 1274 aaKnown RBP15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 RC3H2Q9HBD1 1191 aaKnown RBP15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ZNF302Q9NR11 478 aa15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 PDRG1Q9NUG6 133 aa15.52■□□□□ 0.08
TNFRSF1A-202ENST00000366159 MSH4O15457 936 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 DEXIO95424 95 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 LINC00271P0C7V0 271 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 KLRC1P26715 233 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 IER5Q5VY09 327 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 FAM160B1Q5W0V3 765 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 MIS18BP1Q6P0N0 1132 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 RTN4RL1Q86UN2 441 aaPredicted RBP15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 SMAP1Q8IYB5 467 aaPredicted RBP15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 TRIM22Q8IYM9 498 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 DAGLBQ8NCG7 672 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 GDPD5Q8WTR4 605 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 LINC01599Q8WXQ3 324 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 AIFM3Q96NN9 605 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 UIMC1Q96RL1 719 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 C17orf80Q9BSJ5 609 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 FAM49AQ9H0Q0 323 aaPredicted RBP15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 PCDHA4Q9UN74 947 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 IGSF9BQ9UPX0 1349 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 BDP1A6H8Y1 2624 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 COL1A2P08123 1366 aa15.51■□□□□ 0.07
TNFRSF1A-202ENST00000366159 CYP3A7-CYP3A51PA0A087WV96 503 aa15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 BACH1O14867 736 aa15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 CYP3A7P24462 503 aa15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 NLRP5P59047 1200 aa15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 ANAPC15P60006 121 aa15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 MRPS5P82675 430 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 KRT76Q01546 638 aa15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 SCRN1Q12765 414 aa15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 ZNF484Q5JVG2 852 aa15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 PDXDC2PQ6P474 469 aa15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 KIAA0319LQ8IZA0 1049 aa15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 BBXQ8WY36 941 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 ZNF689Q96CS4 500 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 MBOAT7Q96N66 472 aa15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 CELF4Q9BZC1 486 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 PCDHA10Q9Y5I2 948 aa15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 TRPV2Q9Y5S1 764 aa15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 TTC3P53804 2025 aa15.5■□□□□ 0.07
TNFRSF1A-202ENST00000366159 WDR81Q562E7 1941 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 CPLX1O14810 134 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 PFKFB2O60825 505 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 UPP2O95045 317 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 BMP1P13497 986 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 CD52P31358 61 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 STK3Q13188 491 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 Q4G0T1 1027 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 EPC2Q52LR7 807 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 B3GNT9Q6UX72 402 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 BLIDQ8IZY5 108 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 MICALL1Q8N3F8 863 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 TBCKQ8TEA7 893 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 SLC5A5Q92911 643 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 SAMD11Q96NU1 681 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 RIT2Q99578 217 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 MTUS1Q9ULD2 1270 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 TPCN1Q9ULQ1 816 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 LOXHD1Q8IVV2 1947 aa15.49■□□□□ 0.07
TNFRSF1A-202ENST00000366159 C22orf31O95567 290 aa15.48■□□□□ 0.07
TNFRSF1A-202ENST00000366159 PSAPP07602 524 aa15.48■□□□□ 0.07
TNFRSF1A-202ENST00000366159 TFF2Q03403 129 aa15.48■□□□□ 0.07
TNFRSF1A-202ENST00000366159 TMEM62Q0P6H9 643 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms