RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 BRIP1Q9BX63 1249 aa15.04■□□□□ -0
SMC5-201ENST00000361138 AGPAT5Q9NUQ2 364 aa15.04■□□□□ -0
SMC5-201ENST00000361138 TMEM94Q12767 1356 aa15.03■□□□□ -0
SMC5-201ENST00000361138 CHRNA3P32297 505 aa15.03■□□□□ -0
SMC5-201ENST00000361138 MKRN3Q13064 507 aaKnown RBP15.03■□□□□ -0
SMC5-201ENST00000361138 NR1H3Q13133 447 aa15.03■□□□□ -0
SMC5-201ENST00000361138 DIXDC1Q155Q3 683 aa15.03■□□□□ -0
SMC5-201ENST00000361138 ENAHQ8N8S7 591 aaPredicted RBP15.03■□□□□ -0
SMC5-201ENST00000361138 TACC3Q9Y6A5 838 aa15.03■□□□□ -0
SMC5-201ENST00000361138 A0A0G2JND7 137 aa15.03■□□□□ -0
SMC5-201ENST00000361138 SPAG7O75391 227 aa15.03■□□□□ -0
SMC5-201ENST00000361138 KRT1P04264 644 aa15.03■□□□□ -0
SMC5-201ENST00000361138 COA7Q96BR5 231 aa15.03■□□□□ -0
SMC5-201ENST00000361138 PRPF6O94906 941 aaKnown RBP15.03■□□□□ -0
SMC5-201ENST00000361138 CAV1Q03135 178 aa15.03■□□□□ -0
SMC5-201ENST00000361138 COASYQ13057 564 aa15.03■□□□□ -0
SMC5-201ENST00000361138 SMARCAL1Q9NZC9 954 aa15.03■□□□□ -0
SMC5-201ENST00000361138 DIAPH2O60879 1101 aa15.03■□□□□ -0
SMC5-201ENST00000361138 SASH3O75995 380 aa15.03■□□□□ -0
SMC5-201ENST00000361138 BYSLQ13895 437 aaKnown RBP15.03■□□□□ -0
SMC5-201ENST00000361138 BSPRYQ5W0U4 402 aa15.03■□□□□ -0
SMC5-201ENST00000361138 RFX6Q8HWS3 928 aa15.03■□□□□ -0
SMC5-201ENST00000361138 NUDCD1Q96RS6 583 aa15.03■□□□□ -0
SMC5-201ENST00000361138 TRIM55Q9BYV6 548 aa15.03■□□□□ -0
SMC5-201ENST00000361138 PCDHA1Q9Y5I3 950 aa15.03■□□□□ -0
SMC5-201ENST00000361138 POLR2MP0CAP2 368 aa15.02■□□□□ -0
SMC5-201ENST00000361138 SLC20A2Q08357 652 aa15.02■□□□□ -0
SMC5-201ENST00000361138 DHX34Q14147 1143 aaKnown RBP15.02■□□□□ -0
SMC5-201ENST00000361138 ADSSL1Q8N142 457 aa15.02■□□□□ -0
SMC5-201ENST00000361138 GRAMD1AQ96CP6 724 aa15.02■□□□□ -0
SMC5-201ENST00000361138 CYTH2Q99418 400 aa15.02■□□□□ -0
SMC5-201ENST00000361138 AMACRQ9UHK6 382 aa15.02■□□□□ -0
SMC5-201ENST00000361138 AGTP01019 485 aa15.02■□□□□ -0
SMC5-201ENST00000361138 SPATA21Q7Z572 469 aa15.02■□□□□ -0
SMC5-201ENST00000361138 NLRP10Q86W26 655 aa15.02■□□□□ -0
SMC5-201ENST00000361138 SRRM1Q8IYB3 904 aaKnown RBP15.02■□□□□ -0
SMC5-201ENST00000361138 DYDC2Q96IM9 177 aa15.02■□□□□ -0
SMC5-201ENST00000361138 ACCSQ96QU6 501 aa15.02■□□□□ -0
SMC5-201ENST00000361138 XPO6Q96QU8 1125 aaKnown RBP15.02■□□□□ -0
SMC5-201ENST00000361138 SEC31BQ9NQW1 1179 aa15.02■□□□□ -0
SMC5-201ENST00000361138 PP2D1A8MPX8 630 aa15.02■□□□□ -0
SMC5-201ENST00000361138 KRT19P08727 400 aa15.02■□□□□ -0
SMC5-201ENST00000361138 FCER1AP12319 257 aa15.02■□□□□ -0
SMC5-201ENST00000361138 GARSP41250 739 aaKnown RBP15.02■□□□□ -0
SMC5-201ENST00000361138 LIG4P49917 911 aa15.02■□□□□ -0
SMC5-201ENST00000361138 SEC24CP53992 1094 aa15.02■□□□□ -0
SMC5-201ENST00000361138 CDR2Q01850 454 aa15.02■□□□□ -0
SMC5-201ENST00000361138 KCNH2Q12809 1159 aa15.02■□□□□ -0
SMC5-201ENST00000361138 TEX2Q8IWB9 1127 aa15.02■□□□□ -0
SMC5-201ENST00000361138 VCPKMTQ9H867 229 aa15.02■□□□□ -0
SMC5-201ENST00000361138 USP40Q9NVE5 1235 aa15.02■□□□□ -0
SMC5-201ENST00000361138 DNAJC12Q9UKB3 198 aa15.02■□□□□ -0
SMC5-201ENST00000361138 FOSP01100 380 aaPredicted RBP15.02□□□□□ -0.01
SMC5-201ENST00000361138 ERVK-24P63145 666 aa15.02□□□□□ -0.01
SMC5-201ENST00000361138 CENPUQ71F23 418 aa15.02□□□□□ -0.01
SMC5-201ENST00000361138 A0A1W2PQJ5 194 aa15.02□□□□□ -0.01
SMC5-201ENST00000361138 ECM2O94769 699 aaPredicted RBP15.02□□□□□ -0.01
SMC5-201ENST00000361138 CCND1P24385 295 aa15.02□□□□□ -0.01
SMC5-201ENST00000361138 FOXO4P98177 505 aa15.02□□□□□ -0.01
SMC5-201ENST00000361138 DMP1Q13316 513 aaPredicted RBP15.02□□□□□ -0.01
SMC5-201ENST00000361138 ZNF211Q13398 564 aaPredicted RBP15.02□□□□□ -0.01
SMC5-201ENST00000361138 TXNRD1Q16881 649 aa15.02□□□□□ -0.01
SMC5-201ENST00000361138 ARHGAP18Q8N392 663 aa15.02□□□□□ -0.01
SMC5-201ENST00000361138 SAYSD1Q9NPB0 183 aa15.02□□□□□ -0.01
SMC5-201ENST00000361138 MAD1L1Q9Y6D9 718 aa15.02□□□□□ -0.01
SMC5-201ENST00000361138 SPECC1L-ADORA2AF8WAN1 911 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 BRAFP15056 766 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 UBE2SQ16763 222 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 TMC4Q7Z404 712 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 OR2W6PQ8NHA6 318 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 EDEM3Q9BZQ6 932 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 PCIF1Q9H4Z3 704 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 ARL2BPQ9Y2Y0 163 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 ANKARQ7Z5J8 1434 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 IQANK1A0A1B0GTG1 560 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 RANBP1P43487 201 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 TCP10Q12799 353 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 CDC37Q16543 378 aaPredicted RBP15.01□□□□□ -0.01
SMC5-201ENST00000361138 RINT1Q6NUQ1 792 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 CYB5D1Q6P9G0 228 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 USP17L2Q6R6M4 530 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 PACS2Q86VP3 889 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 SUDS3Q9H7L9 328 aaPredicted RBP15.01□□□□□ -0.01
SMC5-201ENST00000361138 KCNG1Q9UIX4 513 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 GGT7Q9UJ14 662 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 USP17L3A6NCW0 530 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 USP17L4A6NCW7 530 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 TCP11X1B4DZS4 312 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 PPP1R3GB7ZBB8 358 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 ZYXQ15942 572 aaKnown RBP15.01□□□□□ -0.01
SMC5-201ENST00000361138 ATG16L1Q676U5 607 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 TRIM65Q6PJ69 517 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 USP17L1Q7RTZ2 530 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 PCDHB4Q9Y5E5 795 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 PDS5AQ29RF7 1337 aaKnown RBP15.01□□□□□ -0.01
SMC5-201ENST00000361138 TMOD1P28289 359 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 GABPB2Q8TAK5 448 aaPredicted RBP15.01□□□□□ -0.01
SMC5-201ENST00000361138 PHF20Q9BVI0 1012 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 POLD4Q9HCU8 107 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 TRPA1O75762 1119 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms