RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 HERC4Q5GLZ8 1057 aaPredicted RBP23.29■■□□□ 1.32
MAP1LC3A-201ENST00000360668 MIS18BP1Q6P0N0 1132 aa23.29■■□□□ 1.32
MAP1LC3A-201ENST00000360668 ABHD15Q6UXT9 468 aa23.29■■□□□ 1.32
MAP1LC3A-201ENST00000360668 CYFIP1Q7L576 1253 aa23.29■■□□□ 1.32
MAP1LC3A-201ENST00000360668 ATP6V0A1Q93050 837 aa23.29■■□□□ 1.32
MAP1LC3A-201ENST00000360668 P2RX5Q93086 422 aa23.29■■□□□ 1.32
MAP1LC3A-201ENST00000360668 BCAS3Q9H6U6 928 aa23.29■■□□□ 1.32
MAP1LC3A-201ENST00000360668 WDR81Q562E7 1941 aa23.29■■□□□ 1.32
MAP1LC3A-201ENST00000360668 TBCAO75347 108 aaKnown RBP23.28■■□□□ 1.32
MAP1LC3A-201ENST00000360668 ATG7O95352 703 aa23.28■■□□□ 1.32
MAP1LC3A-201ENST00000360668 GAP43P17677 238 aa23.28■■□□□ 1.32
MAP1LC3A-201ENST00000360668 YWHABP31946 246 aaKnown RBP23.28■■□□□ 1.32
MAP1LC3A-201ENST00000360668 CACNB1Q02641 598 aaPredicted RBP23.28■■□□□ 1.32
MAP1LC3A-201ENST00000360668 RAD51AP2Q09MP3 1159 aa23.28■■□□□ 1.32
MAP1LC3A-201ENST00000360668 CDKAL1Q5VV42 579 aa23.28■■□□□ 1.32
MAP1LC3A-201ENST00000360668 SAMSN1Q9NSI8 373 aaKnown RBP23.28■■□□□ 1.32
MAP1LC3A-201ENST00000360668 ANKEF1Q9NU02 776 aa23.28■■□□□ 1.32
MAP1LC3A-201ENST00000360668 CPA4Q9UI42 421 aa23.28■■□□□ 1.32
MAP1LC3A-201ENST00000360668 DIS3Q9Y2L1 958 aaKnown RBP23.28■■□□□ 1.32
MAP1LC3A-201ENST00000360668 COL4A3BPQ9Y5P4 624 aa23.28■■□□□ 1.32
MAP1LC3A-201ENST00000360668 ZNF236Q9UL36 1845 aa23.28■■□□□ 1.32
MAP1LC3A-201ENST00000360668 CBFA2T2O43439 604 aa23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 SUPT20HL2P0C7V6 817 aa23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 CDK11BP21127 795 aaKnown RBP23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 GUCY2CP25092 1073 aa23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 GABBR1Q9UBS5 961 aa23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 ODF2LQ9ULJ1 636 aa23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 SLC15A5A6NIM6 579 aa23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 FARP2O94887 1054 aaPredicted RBP23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 SERPINC1P01008 464 aa23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 RARRES1P49788 294 aa23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 CENPPQ6IPU0 288 aa23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 TTI2Q6NXR4 508 aa23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 FOXR2Q6PJQ5 311 aa23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 ARMCX2Q7L311 632 aa23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 EEPD1Q7L9B9 569 aa23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 IFNKQ9P0W0 207 aa23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 DDX41Q9UJV9 622 aaKnown RBP23.27■■□□□ 1.32
MAP1LC3A-201ENST00000360668 SYNGAP1Q96PV0 1343 aa23.26■■□□□ 1.31
MAP1LC3A-201ENST00000360668 TLR2O60603 784 aa23.26■■□□□ 1.31
MAP1LC3A-201ENST00000360668 KIF20AO95235 890 aa23.26■■□□□ 1.31
MAP1LC3A-201ENST00000360668 TM4SF4P48230 202 aa23.26■■□□□ 1.31
MAP1LC3A-201ENST00000360668 PMS1P54277 932 aaKnown RBP23.26■■□□□ 1.31
MAP1LC3A-201ENST00000360668 PADI6Q6TGC4 694 aa23.26■■□□□ 1.31
MAP1LC3A-201ENST00000360668 METTL7BQ6UX53 244 aa23.26■■□□□ 1.31
MAP1LC3A-201ENST00000360668 MYOCDQ8IZQ8 938 aa23.26■■□□□ 1.31
MAP1LC3A-201ENST00000360668 NOC3LQ8WTT2 800 aaKnown RBP23.26■■□□□ 1.31
MAP1LC3A-201ENST00000360668 XPO4Q9C0E2 1151 aaKnown RBP23.26■■□□□ 1.31
MAP1LC3A-201ENST00000360668 ZHX3Q9H4I2 956 aa23.26■■□□□ 1.31
MAP1LC3A-201ENST00000360668 ZFYVE28Q9HCC9 887 aa23.26■■□□□ 1.31
MAP1LC3A-201ENST00000360668 MCM3APO60318 1980 aa23.26■■□□□ 1.31
MAP1LC3A-201ENST00000360668 IGSF9BQ9UPX0 1349 aa23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 TRIM49BA6NDI0 452 aa23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 FAM13AO94988 1023 aa23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 CTCFP49711 727 aaPredicted RBP23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 ZNF131P52739 623 aa23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 UBASH3AP57075 661 aa23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 SP4Q02446 784 aa23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 SWSAP1Q6NVH7 229 aa23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 C17orf99Q6UX52 265 aa23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 MAMDC4Q6UXC1 1216 aa23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 OTUD6AQ7L8S5 288 aa23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 FBXO16Q8IX29 292 aaPredicted RBP23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 TRIM47Q96LD4 638 aa23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 BEGAINQ9BUH8 593 aa23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 TIPINQ9BVW5 301 aa23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 SEL1LQ9UBV2 794 aa23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 ZKSCAN5Q9Y2L8 839 aa23.25■■□□□ 1.31
MAP1LC3A-201ENST00000360668 RSPH10B2B2RC85 870 aa23.24■■□□□ 1.31
MAP1LC3A-201ENST00000360668 GGPS1O95749 300 aa23.24■■□□□ 1.31
MAP1LC3A-201ENST00000360668 RSPH10BP0C881 870 aa23.24■■□□□ 1.31
MAP1LC3A-201ENST00000360668 SPAG1Q07617 926 aa23.24■■□□□ 1.31
MAP1LC3A-201ENST00000360668 COL13A1Q5TAT6 717 aaPredicted RBP23.24■■□□□ 1.31
MAP1LC3A-201ENST00000360668 CCDC62Q6P9F0 684 aa23.24■■□□□ 1.31
MAP1LC3A-201ENST00000360668 DPP9Q86TI2 863 aa23.24■■□□□ 1.31
MAP1LC3A-201ENST00000360668 SFR1Q86XK3 245 aa23.24■■□□□ 1.31
MAP1LC3A-201ENST00000360668 CCDC60Q8IWA6 550 aaPredicted RBP23.24■■□□□ 1.31
MAP1LC3A-201ENST00000360668 CCDC43Q96MW1 224 aaKnown RBP23.24■■□□□ 1.31
MAP1LC3A-201ENST00000360668 THAP9Q9H5L6 903 aa23.24■■□□□ 1.31
MAP1LC3A-201ENST00000360668 VTA1Q9NP79 307 aa23.24■■□□□ 1.31
MAP1LC3A-201ENST00000360668 OLFML3Q9NRN5 406 aa23.24■■□□□ 1.31
MAP1LC3A-201ENST00000360668 TELO2Q9Y4R8 837 aa23.24■■□□□ 1.31
MAP1LC3A-201ENST00000360668 IGKV6D-21A0A0A0MT36 114 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 ZNF862O60290 1169 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 SORBS3O60504 671 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 ARIH2O95376 493 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 LY6KQ17RY6 165 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 ANKRD40Q6AI12 368 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 DRC7Q8IY82 874 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 SCFD2Q8WU76 684 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 DUSP9Q99956 384 aaKnown RBP23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 SEMA6BQ9H3T3 888 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 PARVGQ9HBI0 331 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 SLC5A4Q9NY91 659 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 TBC1D7Q9P0N9 293 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 BACH1O14867 736 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 STBD1O95210 358 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 LRRC63Q05C16 580 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 TTLL4Q14679 1199 aa23.23■■□□□ 1.31
MAP1LC3A-201ENST00000360668 LRRC41Q15345 812 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms