RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 RUBCNLQ9H714 662 aa18.53■□□□□ 0.56
CACNA1A-201ENST00000360228 STK17AQ9UEE5 414 aa18.53■□□□□ 0.56
CACNA1A-201ENST00000360228 BEND6Q5SZJ8 279 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-201ENST00000360228 BTNL9Q6UXG8 535 aa18.53■□□□□ 0.56
CACNA1A-201ENST00000360228 WDR75Q8IWA0 830 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-201ENST00000360228 SH3GL1Q99961 368 aa18.53■□□□□ 0.56
CACNA1A-201ENST00000360228 ASCC2Q9H1I8 757 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-201ENST00000360228 ZWILCHQ9H900 591 aa18.53■□□□□ 0.56
CACNA1A-201ENST00000360228 RASSF10A6NK89 507 aa18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 KRT17Q04695 432 aa18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 IFT43Q96FT9 208 aa18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 HPCAL4Q9UM19 191 aa18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 MAP3K1Q13233 1512 aa18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 ZSCAN20P17040 1043 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 COPB1P53618 953 aaKnown RBP18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 UBE2TQ9NPD8 197 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 NOVA2Q9UNW9 492 aaKnown RBP18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 PPARAQ07869 468 aa18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 RARS2Q5T160 578 aaKnown RBP18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 HORMAD1Q86X24 394 aa18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 ULK4Q96C45 1275 aa18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 SEC24DO94855 1032 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 TMEM245Q9H330 911 aa18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 DNAJC17Q9NVM6 304 aaKnown RBP18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 NESP48681 1621 aa18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 PLA2G4DQ86XP0 818 aa18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 AP1M1Q9BXS5 423 aa18.52■□□□□ 0.56
CACNA1A-201ENST00000360228 COPEO14579 308 aa18.52■□□□□ 0.55
CACNA1A-201ENST00000360228 PTGDRQ13258 359 aa18.52■□□□□ 0.55
CACNA1A-201ENST00000360228 FAM133AQ8N9E0 248 aa18.52■□□□□ 0.55
CACNA1A-201ENST00000360228 LRRC59Q96AG4 307 aaKnown RBP18.52■□□□□ 0.55
CACNA1A-201ENST00000360228 OSBPL10Q9BXB5 764 aa18.52■□□□□ 0.55
CACNA1A-201ENST00000360228 CDC23Q9UJX2 597 aa18.52■□□□□ 0.55
CACNA1A-201ENST00000360228 NEMP1O14524 444 aa18.52■□□□□ 0.55
CACNA1A-201ENST00000360228 PAPOLAP51003 745 aaKnown RBP18.52■□□□□ 0.55
CACNA1A-201ENST00000360228 TEDDM1Q5T9Z0 273 aa18.52■□□□□ 0.55
CACNA1A-201ENST00000360228 BTBD6Q96KE9 485 aa18.52■□□□□ 0.55
CACNA1A-201ENST00000360228 NXF1Q9UBU9 619 aaKnown RBP18.52■□□□□ 0.55
CACNA1A-201ENST00000360228 ZMYM6O95789 1325 aa18.52■□□□□ 0.55
CACNA1A-201ENST00000360228 EIF4E1BA6NMX2 242 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 RBM6P78332 1123 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 DPP9Q86TI2 863 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 SENP1Q9P0U3 644 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 POLIQ9UNA4 740 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 CHUKO15111 745 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 GFPT2O94808 682 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 SMARCA1P28370 1054 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 ETF1P62495 437 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 HEXIM2Q96MH2 286 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 DONSONQ9NYP3 566 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 TNFAIP1Q13829 316 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 ELAC2Q9BQ52 826 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 NRBP2Q9NSY0 501 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 IQGAP2Q13576 1575 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 SPATA1Q5VX52 437 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 PDIK1LQ8N165 341 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 KMT5AQ9NQR1 393 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 NINQ8N4C6 2090 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 EIF3BP55884 814 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 GOLGA8FQ08AF8 430 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 ZFP42Q96MM3 310 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 SOS2Q07890 1332 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 EYA2O00167 538 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 KRT72Q14CN4 511 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 FBXO11Q86XK2 927 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 TTC8Q8TAM2 541 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 ZNF507Q8TCN5 953 aa18.51■□□□□ 0.55
CACNA1A-201ENST00000360228 TJP3O95049 919 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 LRRC8EQ6NSJ5 796 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 ANO5Q75V66 913 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 BZW1Q7L1Q6 419 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 USP40Q9NVE5 1235 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 ADGRL1O94910 1474 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 DEFA1P59665 94 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 DEFA3P59666 94 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 NEK9Q8TD19 979 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 LPIN2Q92539 896 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 FAM81BQ96LP2 452 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 SEPT3Q9UH03 358 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 GTPBP6O43824 516 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 ST13P50502 369 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 STOML1Q9UBI4 398 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 FTCDO95954 541 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 NR5A1Q13285 461 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 MFSD14BQ5SR56 506 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 CC2D2BQ6DHV5 1058 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 CAPRIN2Q6IMN6 1127 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 RBL2Q08999 1139 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 BBS9Q3SYG4 887 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 RASA4BC9J798 803 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 RASA4O43374 803 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 CD58P19256 250 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 MAP4P27816 1152 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 WASHC5Q12768 1159 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 CERKLQ49MI3 558 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 MIS18BP1Q6P0N0 1132 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 RFX8Q6ZV50 586 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 AHI1Q8N157 1196 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 ZNF555Q8NEP9 628 aa18.5■□□□□ 0.55
CACNA1A-201ENST00000360228 TMEM161AQ9NX61 479 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms