RNA–Protein interactions for RNA: ENST00000359979.8

CCSER2-202, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 1 (best) BASIC

Gene CCSER2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-202ENST00000359979 APOBEC3HQ6NTF7 200 aaKnown RBP24.54■■□□□ 1.52
CCSER2-202ENST00000359979 KCTD17Q8N5Z5 321 aa24.54■■□□□ 1.52
CCSER2-202ENST00000359979 ACTRT1Q8TDG2 376 aa24.54■■□□□ 1.52
CCSER2-202ENST00000359979 IFT81Q8WYA0 676 aa24.54■■□□□ 1.52
CCSER2-202ENST00000359979 ZC3H12CQ9C0D7 883 aaKnown RBP24.54■■□□□ 1.52
CCSER2-202ENST00000359979 EBAG9O00559 213 aa24.53■■□□□ 1.52
CCSER2-202ENST00000359979 KIF4AO95239 1232 aa24.53■■□□□ 1.52
CCSER2-202ENST00000359979 FAM153BP0C7A2 387 aa24.53■■□□□ 1.52
CCSER2-202ENST00000359979 SPATA31C1P0DKV0 1188 aa24.53■■□□□ 1.52
CCSER2-202ENST00000359979 SLC9A1P19634 815 aa24.53■■□□□ 1.52
CCSER2-202ENST00000359979 RPL13P26373 211 aaKnown RBP24.53■■□□□ 1.52
CCSER2-202ENST00000359979 RXRBP28702 533 aa24.53■■□□□ 1.52
CCSER2-202ENST00000359979 FAM153CQ494X1 144 aa24.53■■□□□ 1.52
CCSER2-202ENST00000359979 SLFN13Q68D06 897 aa24.53■■□□□ 1.52
CCSER2-202ENST00000359979 SFR1Q86XK3 245 aa24.53■■□□□ 1.52
CCSER2-202ENST00000359979 BCAS4Q8TDM0 211 aa24.53■■□□□ 1.52
CCSER2-202ENST00000359979 REEP2Q9BRK0 252 aa24.53■■□□□ 1.52
CCSER2-202ENST00000359979 TYW1Q9NV66 732 aaKnown RBP24.53■■□□□ 1.52
CCSER2-202ENST00000359979 FAM153AQ9UHL3 310 aa24.53■■□□□ 1.52
CCSER2-202ENST00000359979 NAGPAQ9UK23 515 aa24.53■■□□□ 1.52
CCSER2-202ENST00000359979 NENFQ9UMX5 172 aa24.53■■□□□ 1.52
CCSER2-202ENST00000359979 PACSIN2Q9UNF0 486 aaPredicted RBP24.53■■□□□ 1.52
CCSER2-202ENST00000359979 FLOT1O75955 427 aa24.52■■□□□ 1.52
CCSER2-202ENST00000359979 FOSP01100 380 aaPredicted RBP24.52■■□□□ 1.52
CCSER2-202ENST00000359979 ACTN1P12814 892 aa24.52■■□□□ 1.52
CCSER2-202ENST00000359979 HOXD13P35453 343 aa24.52■■□□□ 1.52
CCSER2-202ENST00000359979 DNA2P51530 1060 aa24.52■■□□□ 1.52
CCSER2-202ENST00000359979 PRR16Q569H4 304 aa24.52■■□□□ 1.52
CCSER2-202ENST00000359979 LRRC57Q8N9N7 239 aa24.52■■□□□ 1.52
CCSER2-202ENST00000359979 CALR3Q96L12 384 aaKnown RBP24.52■■□□□ 1.52
CCSER2-202ENST00000359979 ESYT3A0FGR9 886 aa24.52■■□□□ 1.52
CCSER2-202ENST00000359979 ZSCAN5CA6NGD5 496 aaPredicted RBP24.52■■□□□ 1.52
CCSER2-202ENST00000359979 EEF2P13639 858 aaKnown RBP24.52■■□□□ 1.52
CCSER2-202ENST00000359979 DDR1Q08345 913 aa24.52■■□□□ 1.52
CCSER2-202ENST00000359979 EPHA7Q15375 998 aa24.52■■□□□ 1.52
CCSER2-202ENST00000359979 ENOX2Q16206 610 aaKnown RBP24.52■■□□□ 1.52
CCSER2-202ENST00000359979 KDM7AQ6ZMT4 941 aa24.52■■□□□ 1.52
CCSER2-202ENST00000359979 LENG9Q96B70 501 aa24.52■■□□□ 1.52
CCSER2-202ENST00000359979 AMNQ9BXJ7 453 aa24.52■■□□□ 1.52
CCSER2-202ENST00000359979 DNAJC18Q9H819 358 aa24.52■■□□□ 1.52
CCSER2-202ENST00000359979 BRWD3Q6RI45 1802 aa24.52■■□□□ 1.52
CCSER2-202ENST00000359979 GTPBP10A4D1E9 387 aaKnown RBP24.51■■□□□ 1.51
CCSER2-202ENST00000359979 ZNF233A6NK53 670 aa24.51■■□□□ 1.51
CCSER2-202ENST00000359979 POLRMTO00411 1230 aaKnown RBP24.51■■□□□ 1.51
CCSER2-202ENST00000359979 RAD51CO43502 376 aa24.51■■□□□ 1.51
CCSER2-202ENST00000359979 SREBF1P36956 1147 aa24.51■■□□□ 1.51
CCSER2-202ENST00000359979 CCT5P48643 541 aa24.51■■□□□ 1.51
CCSER2-202ENST00000359979 SCNN1DP51172 638 aa24.51■■□□□ 1.51
CCSER2-202ENST00000359979 PSMC6P62333 389 aa24.51■■□□□ 1.51
CCSER2-202ENST00000359979 PABPC4Q13310 644 aaKnown RBP eCLIP24.51■■□□□ 1.51
CCSER2-202ENST00000359979 VPS36Q86VN1 386 aa24.51■■□□□ 1.51
CCSER2-202ENST00000359979 SCFD2Q8WU76 684 aa24.51■■□□□ 1.51
CCSER2-202ENST00000359979 PIK3R5Q8WYR1 880 aa24.51■■□□□ 1.51
CCSER2-202ENST00000359979 UIMC1Q96RL1 719 aa24.51■■□□□ 1.51
CCSER2-202ENST00000359979 ISCUQ9H1K1 167 aa24.51■■□□□ 1.51
CCSER2-202ENST00000359979 INTUQ9ULD6 942 aa24.51■■□□□ 1.51
CCSER2-202ENST00000359979 A0A0A6YYK5 440 aaPredicted RBP24.5■■□□□ 1.51
CCSER2-202ENST00000359979 KCNK3O14649 394 aa24.5■■□□□ 1.51
CCSER2-202ENST00000359979 CIITAP33076 1130 aa24.5■■□□□ 1.51
CCSER2-202ENST00000359979 HSPA9P38646 679 aaKnown RBP24.5■■□□□ 1.51
CCSER2-202ENST00000359979 MMP14P50281 582 aa24.5■■□□□ 1.51
CCSER2-202ENST00000359979 CUL1Q13616 776 aa24.5■■□□□ 1.51
CCSER2-202ENST00000359979 ALKBH5Q6P6C2 394 aaKnown RBP24.5■■□□□ 1.51
CCSER2-202ENST00000359979 TAF1DQ9H5J8 278 aaPredicted RBP24.5■■□□□ 1.51
CCSER2-202ENST00000359979 A0A087WUV0 522 aaPredicted RBP24.5■■□□□ 1.51
CCSER2-202ENST00000359979 AKAP3O75969 853 aa24.5■■□□□ 1.51
CCSER2-202ENST00000359979 CPP00450 1065 aa24.5■■□□□ 1.51
CCSER2-202ENST00000359979 KRT14P02533 472 aa24.5■■□□□ 1.51
CCSER2-202ENST00000359979 JAM2P57087 298 aa24.5■■□□□ 1.51
CCSER2-202ENST00000359979 NFIAQ12857 509 aa24.5■■□□□ 1.51
CCSER2-202ENST00000359979 LMBR1Q8WVP7 490 aa24.5■■□□□ 1.51
CCSER2-202ENST00000359979 ZEB2O60315 1214 aa24.49■■□□□ 1.51
CCSER2-202ENST00000359979 NR3C1P04150 777 aa24.49■■□□□ 1.51
CCSER2-202ENST00000359979 RBM46Q8TBY0 533 aaKnown RBP24.49■■□□□ 1.51
CCSER2-202ENST00000359979 POLR3CQ9BUI4 534 aaPredicted RBP24.49■■□□□ 1.51
CCSER2-202ENST00000359979 SPDYE3A6NKU9 549 aa24.49■■□□□ 1.51
CCSER2-202ENST00000359979 SLFN11Q7Z7L1 901 aa24.49■■□□□ 1.51
CCSER2-202ENST00000359979 P2RX7Q99572 595 aaKnown RBP24.49■■□□□ 1.51
CCSER2-202ENST00000359979 SIX2Q9NPC8 291 aa24.49■■□□□ 1.51
CCSER2-202ENST00000359979 ASTN1O14525 1302 aa24.48■■□□□ 1.51
CCSER2-202ENST00000359979 BHMG1C9JSJ3 638 aaPredicted RBP24.48■■□□□ 1.51
CCSER2-202ENST00000359979 MEIS1O00470 390 aa24.48■■□□□ 1.51
CCSER2-202ENST00000359979 GFPT2O94808 682 aa24.48■■□□□ 1.51
CCSER2-202ENST00000359979 NOP2P46087 812 aaKnown RBP24.48■■□□□ 1.51
CCSER2-202ENST00000359979 NPEPPSP55786 919 aa24.48■■□□□ 1.51
CCSER2-202ENST00000359979 CERKLQ49MI3 558 aaPredicted RBP24.48■■□□□ 1.51
CCSER2-202ENST00000359979 TPCN2Q8NHX9 752 aa24.48■■□□□ 1.51
CCSER2-202ENST00000359979 SLC35C1Q96A29 364 aa24.48■■□□□ 1.51
CCSER2-202ENST00000359979 ZDHHC15Q96MV8 337 aa24.48■■□□□ 1.51
CCSER2-202ENST00000359979 OLFML3Q9NRN5 406 aa24.48■■□□□ 1.51
CCSER2-202ENST00000359979 HMGB1P1B2RPK0 211 aaPredicted RBP24.47■■□□□ 1.51
CCSER2-202ENST00000359979 PGRMC1O00264 195 aaKnown RBP24.47■■□□□ 1.51
CCSER2-202ENST00000359979 ZBTB48P10074 688 aaPredicted RBP24.47■■□□□ 1.51
CCSER2-202ENST00000359979 GAP43P17677 238 aa24.47■■□□□ 1.51
CCSER2-202ENST00000359979 GUCY2FP51841 1108 aa24.47■■□□□ 1.51
CCSER2-202ENST00000359979 TTC31Q49AM3 519 aaPredicted RBP24.47■■□□□ 1.51
CCSER2-202ENST00000359979 DCAF17Q5H9S7 520 aaPredicted RBP24.47■■□□□ 1.51
CCSER2-202ENST00000359979 LRIG3Q6UXM1 1119 aa24.47■■□□□ 1.51
CCSER2-202ENST00000359979 SYCE1Q8N0S2 351 aa24.47■■□□□ 1.51
CCSER2-202ENST00000359979 GMCL1P1Q8NEA9 526 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms