RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 GUCY2DQ02846 1103 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 TAF1BQ53T94 588 aaPredicted RBP10.94□□□□□ -0.66
CLIP1-202ENST00000358808 THEMIS2Q5TEJ8 643 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 SELENONQ9NZV5 590 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 USP6P35125 1406 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 ECEL1O95672 775 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 STX19Q8N4C7 294 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 AFG1LQ8WV93 481 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 SENP1Q9P0U3 644 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 DOLKQ9UPQ8 538 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 WDR91A4D1P6 747 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 ZRANB2O95218 330 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLIP1-202ENST00000358808 FSD1LQ9BXM9 530 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 ATG3Q9NT62 314 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 AFF2P51816 1311 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 HSPA4LO95757 839 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 ZBED1O96006 694 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 PYGBP11216 843 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 HIF1AQ16665 826 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 RRM2BQ7LG56 351 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 B4GALNT2Q8NHY0 566 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 ZC3H15Q8WU90 426 aaKnown RBP10.94□□□□□ -0.66
CLIP1-202ENST00000358808 ASIC4Q96FT7 647 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 DNAJC7Q99615 494 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 AMNQ9BXJ7 453 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 PPRC1Q5VV67 1664 aaKnown RBP10.94□□□□□ -0.66
CLIP1-202ENST00000358808 LRRN2O75325 713 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 SCG2P13521 617 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 PLS3P13797 630 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 TCP1P17987 556 aaKnown RBP10.94□□□□□ -0.66
CLIP1-202ENST00000358808 PGBD3Q8N328 593 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 MAML1Q92585 1016 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 ZWILCHQ9H900 591 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 FGFR1OP2Q9NVK5 253 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 INTUQ9ULD6 942 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 NPC1L1Q9UHC9 1359 aa10.94□□□□□ -0.66
CLIP1-202ENST00000358808 E5RI56 91 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 TRIP13Q15645 432 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-202ENST00000358808 TRIM60Q495X7 471 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 GALNT17Q6IS24 598 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 KCTD1Q719H9 257 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 SPATS2Q86XZ4 545 aaKnown RBP10.93□□□□□ -0.66
CLIP1-202ENST00000358808 RAB42Q8N4Z0 105 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 CCDC197Q8NCU1 140 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 OR9Q1Q8NGQ5 310 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 XPO4Q9C0E2 1151 aaKnown RBP10.93□□□□□ -0.66
CLIP1-202ENST00000358808 SOS2Q07890 1332 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-202ENST00000358808 PI4K2BG5E9Z4 385 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 JAK2O60674 1132 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 SERPINI2O75830 405 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 GAP43P17677 238 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 PPP1R2P3Q6NXS1 205 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 MRPL47Q9HD33 250 aaKnown RBP10.93□□□□□ -0.66
CLIP1-202ENST00000358808 GDF11O95390 407 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 PCCAP05165 728 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-202ENST00000358808 PSAPP07602 524 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 PFKFB1P16118 471 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 TEX9Q8N6V9 391 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 FAM81BQ96LP2 452 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 NLRP4Q96MN2 994 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 TBK1Q9UHD2 729 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 ARIH2O95376 493 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 TSPY1Q01534 308 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 PRKCQQ04759 706 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 LLGL1Q15334 1064 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 OTUB1Q96FW1 271 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-202ENST00000358808 EGFL8Q99944 293 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 DBNDD1Q9H9R9 158 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 LAMC1P11047 1609 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 SPATA31A3Q5VYP0 1347 aa10.93□□□□□ -0.66
CLIP1-202ENST00000358808 KRT87PA6NCN2 255 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 ARHGEF9O43307 516 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 GTPBP6O43824 516 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-202ENST00000358808 MYO1DO94832 1006 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 AFPP02771 609 aaKnown RBP10.92□□□□□ -0.66
CLIP1-202ENST00000358808 NUDT18Q6ZVK8 323 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 TMC4Q7Z404 712 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 NOSTRINQ8IVI9 506 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 GINM1Q9NU53 330 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 TNS3Q68CZ2 1445 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 MCF2P10911 925 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 RBBP7Q16576 425 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 CC2D1AQ6P1N0 951 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-202ENST00000358808 CATSPER4Q7RTX7 472 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 PHF21AQ96BD5 680 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 MTBPQ96DY7 904 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 LEMD3Q9Y2U8 911 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 KIDINS220Q9ULH0 1771 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 PNMA6EA0A0J9YXQ4 647 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 CLIC2O15247 247 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 DDAH1O94760 285 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 NR2F2P24468 414 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 CACNB1Q02641 598 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-202ENST00000358808 TJAP1Q5JTD0 557 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 IFNL3Q8IZI9 196 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 TRIML2Q8N7C3 387 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 C2orf69Q8N8R5 385 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 CDHR1Q96JP9 859 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 ZFP42Q96MM3 310 aa10.92□□□□□ -0.66
CLIP1-202ENST00000358808 DSCC1Q9BVC3 393 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms