RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 GPAT2Q6NUI2 795 aa15.79■□□□□ 0.12
NIPAL3-203ENST00000358028 CCDC65Q8IXS2 484 aa15.79■□□□□ 0.12
NIPAL3-203ENST00000358028 GLIS3Q8NEA6 775 aa15.79■□□□□ 0.12
NIPAL3-203ENST00000358028 ACER1Q8TDN7 264 aa15.79■□□□□ 0.12
NIPAL3-203ENST00000358028 EIF3CQ99613 913 aaKnown RBP15.79■□□□□ 0.12
NIPAL3-203ENST00000358028 FUT8Q9BYC5 575 aa15.79■□□□□ 0.12
NIPAL3-203ENST00000358028 MCOLN1Q9GZU1 580 aa15.79■□□□□ 0.12
NIPAL3-203ENST00000358028 NDST4Q9H3R1 872 aa15.79■□□□□ 0.12
NIPAL3-203ENST00000358028 R3HDMLQ9H3Y0 253 aa15.79■□□□□ 0.12
NIPAL3-203ENST00000358028 ZSWIM8A7E2V4 1837 aa15.78■□□□□ 0.12
NIPAL3-203ENST00000358028 MED24O75448 989 aa15.78■□□□□ 0.12
NIPAL3-203ENST00000358028 BACE1P56817 501 aa15.78■□□□□ 0.12
NIPAL3-203ENST00000358028 HERVK_113P62684 666 aa15.78■□□□□ 0.12
NIPAL3-203ENST00000358028 PRR16Q569H4 304 aa15.78■□□□□ 0.12
NIPAL3-203ENST00000358028 HAUS3Q68CZ6 603 aa15.78■□□□□ 0.12
NIPAL3-203ENST00000358028 GPBP1Q86WP2 473 aa15.78■□□□□ 0.12
NIPAL3-203ENST00000358028 ANKZF1Q9H8Y5 726 aa15.78■□□□□ 0.12
NIPAL3-203ENST00000358028 ARHGEF10LQ9HCE6 1279 aa15.78■□□□□ 0.12
NIPAL3-203ENST00000358028 PUF60Q9UHX1 559 aaKnown RBP15.78■□□□□ 0.12
NIPAL3-203ENST00000358028 PRR12Q9ULL5 1215 aa15.78■□□□□ 0.12
NIPAL3-203ENST00000358028 KRT86O43790 486 aa15.77■□□□□ 0.12
NIPAL3-203ENST00000358028 ALDH1A1P00352 501 aa15.77■□□□□ 0.12
NIPAL3-203ENST00000358028 HNRNPH3P31942 346 aaKnown RBP15.77■□□□□ 0.12
NIPAL3-203ENST00000358028 SPIRE1Q08AE8 756 aa15.77■□□□□ 0.12
NIPAL3-203ENST00000358028 CRHR2Q13324 411 aa15.77■□□□□ 0.12
NIPAL3-203ENST00000358028 ZYXQ15942 572 aaKnown RBP15.77■□□□□ 0.12
NIPAL3-203ENST00000358028 LONRF2Q1L5Z9 754 aa15.77■□□□□ 0.12
NIPAL3-203ENST00000358028 ZCWPW2Q504Y3 356 aa15.77■□□□□ 0.12
NIPAL3-203ENST00000358028 TREML2Q5T2D2 321 aa15.77■□□□□ 0.12
NIPAL3-203ENST00000358028 ERMNQ8TAM6 284 aa15.77■□□□□ 0.12
NIPAL3-203ENST00000358028 RPGRIP1Q96KN7 1286 aa15.77■□□□□ 0.12
NIPAL3-203ENST00000358028 EPC1Q9H2F5 836 aa15.77■□□□□ 0.12
NIPAL3-203ENST00000358028 SIK3Q9Y2K2 1263 aa15.77■□□□□ 0.12
NIPAL3-203ENST00000358028 PDHXO00330 501 aa15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 OPLAHO14841 1288 aa15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 TAL1P17542 331 aaPredicted RBP15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 CYP11B2P19099 503 aa15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 CIITAP33076 1130 aa15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 TAF1CQ15572 869 aaPredicted RBP15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 SH3D19Q5HYK7 790 aa15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 TAF3Q5VWG9 929 aa15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 FASTKD5Q7L8L6 764 aaKnown RBP15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 TRAPPC11Q7Z392 1133 aa15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 ANKRD23Q86SG2 305 aa15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 KIAA1328Q86T90 577 aa15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 LENG9Q96B70 501 aa15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 CFHR5Q9BXR6 569 aa15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 TSGA10Q9BZW7 698 aa15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 PCDHA2Q9Y5H9 948 aa15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 STK24Q9Y6E0 443 aa15.77■□□□□ 0.11
NIPAL3-203ENST00000358028 NPHP3-ACAD11A0A0J9YXS1 232 aa15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 ANO9A1A5B4 782 aa15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 MAP2K7O14733 419 aa15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 SASH3O75995 380 aa15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 SLC12A3P55017 1021 aa15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 CCDC122Q5T0U0 273 aa15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 PAPD7Q5XG87 772 aaKnown RBP15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 NCAPH2Q6IBW4 605 aa15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 SPICE1Q8N0Z3 855 aa15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 PROCA1Q8NCQ7 364 aaPredicted RBP15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 JAKMIP2Q96AA8 810 aa15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 FAM20AQ96MK3 541 aa15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 NHEJ1Q9H9Q4 299 aaPredicted RBP15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 TRIM10Q9UDY6 481 aa15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 ZHX1Q9UKY1 873 aaPredicted RBP15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 GUCA1BQ9UMX6 200 aa15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 RLFQ13129 1914 aa15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 HTTP42858 3142 aa15.76■□□□□ 0.11
NIPAL3-203ENST00000358028 POTEFA5A3E0 1075 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 FAM86B1E9PN63 330 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 PIK3CDO00329 1044 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 CYP3A4P08684 503 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 FAM86B2P0C5J1 330 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 MCM3P25205 808 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 STAT2P52630 851 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 FKBP3Q00688 224 aaKnown RBP15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 CKAP4Q07065 602 aaKnown RBP15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 TRAF1Q13077 416 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 GPS2Q13227 327 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 SMC1AQ14683 1233 aaKnown RBP15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 POTEGQ6S5H5 508 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 POTEEQ6S8J3 1075 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 HDXQ7Z353 690 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 CEP63Q96MT8 703 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 FGFBP2Q9BYJ0 223 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 EDEM3Q9BZQ6 932 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 GOPCQ9HD26 462 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 ZCCHC17Q9NP64 241 aaKnown RBP15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 EMILIN3Q9NT22 766 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 TBC1D7Q9P0N9 293 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 AGTPBP1Q9UPW5 1226 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 TMX2Q9Y320 296 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 COL4A3BPQ9Y5P4 624 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 MGAMO43451 1857 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 FRMD3A2A2Y4 597 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 C19orf81C9J6K1 198 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 KRT18P05783 430 aaKnown RBP15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 HOXA13P31271 388 aaPredicted RBP15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 CACNB1Q02641 598 aaPredicted RBP15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 HERC4Q5GLZ8 1057 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms